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SICVALVES - Multiscale Modeling of Valvular Heart Diseases

SICVALVES - Multiscale Modeling of Valvular Heart Diseases

Christoph Augustin (ORCID: 0000-0001-6341-4014)
  • Grant DOI 10.55776/I4652
  • Funding program International - Multilateral Initiatives
  • Status ended
  • Start May 1, 2020
  • End April 30, 2024
  • Funding amount € 216,836
  • E-mail

ERA-NET: ERA-CVD

Disciplines

Other Technical Sciences (40%); Mathematics (20%); Medical Engineering (40%)

Keywords

    Aortic Valve Stenosis, Heart Failure, Arrhythmias, Modeling, Valvular Heart Disease

Abstract Final report

Background: Valvular Heart Diseases (VHD) are a detrimental health burden to the aging population where aortic valve stenosis alone has reached an incidence of more than 12% of patients >70y. It is a chronic-progressive disease that varies with gender and age. If le ft untreated, VHDs can cause malignant arrhythmias and severe heart failure. However, existing guidelines for treatment planning are using only rough function parameters that fail to account for inter -individual variability and are far away from the demands of precision medicine. In the age of digital medicine, computational modeling has the potential to unveil important pathophysiological mechanisms and to contribution towards personalized precision medicine. Objectives: To use advanced models of the cell, tissue, and organ level in VHD to gain mechanistic insights about triggers of ventricular arrhythmias, diastolic, and systolic dysfunction and myocardial metabolic alterations and how these processes reinforce each other. Gender differences will be systematically taken into account. Ultimately, models shall contribute to improve diagnostics, risk assessment, and treatment planning of VHDs. Methods: Based on our previous work, we will technologically advance, test, and validate existing computational models of biomechanics, electrophysiology, and hemodynamics. For model parameterization we use existing multidimensional clinical data (imaging, sensors, omics) from own previous research in patients with VHD (obtained before and after valve replacement). Valida tion of the model`s accuracy to predict mechanistic changes will be done with data obtained before and after aortic valve replacement. Innovation: Advanced computational models will be leveraged to build personalized models and use these for quantitative assessment of hypertrophic remodeling and propensity for arrhythmias. Novel methodologies will be developed to understand important mechanisms of adverse remodeling in VHDs, as well as to improve patient care by optimizing patient selection and precision tr eatment planning in valve disease.

The project is part of the consortial network ERA-CVD SICVALVES, involving the following research groups: Dr. Christoph Augustin (Medical University of Graz), Dr. Sarah Nordmeyer (Charité Berlin), and Dr. Jason Bayer (IHU LIRYC Bordeaux). The goal of the project is to apply and validate computer-based models to better understand disease-related changes in the heart muscle and to optimize patient-specific therapy planning for heart valve diseases. The models aim to: 1. Plan heart valve replacement therapy more individually, thereby improving treatment outcomes, 2. Predict the regression of disease-related heart muscle changes after valve replacement, and 3. Better understand the relationship between heart muscle changes and the development of cardiac arrhythmias. To achieve this, existing hemodynamic, biomechanical, and electrophysiological models were optimized using patient-specific data. Preoperative patient data were used to predict postoperative conditions with these models. These predictions are then compared with actual postoperative measurements for validation. The focus of the research group in Graz was on creating virtual, anatomical replicas of the patient's hearts, developing software for the electromechanical simulation of the heart muscle, and personalizing the computer model with clinical data. Data collected from previous studies at Charité Berlin were used to individually calibrate the computer-based models, enabling patient-specific therapy planning for heart valve replacement in patients with heart valve diseases.

Research institution(s)
  • Medizinische Universität Graz - 100%
International project participants
  • Jason Bayer, Université Bordeaux Segalen - France
  • Sarah Nordmeyer, Deutsches Herzzentrum Berlin - Germany

Research Output

  • 236 Citations
  • 28 Publications
  • 9 Datasets & models
  • 1 Software
  • 2 Disseminations
  • 1 Scientific Awards
  • 4 Fundings
Publications
  • 2022
    Title Calibration of Cohorts of Virtual Patient Heart Models Using Bayesian History Matching
    DOI 10.1007/s10439-022-03095-9
    Type Journal Article
    Author Rodero C
    Journal Annals of Biomedical Engineering
    Pages 241-252
    Link Publication
  • 2022
    Title The interplay of sex-specific electrophysiology and repolarization heterogeneity governs ventricular arrhythmia sustainability in women
    DOI 10.1093/eurheartj/ehac544.2518
    Type Journal Article
    Author Sobota V
    Journal European Heart Journal
    Link Publication
  • 2022
    Title A personalized real-time virtual model of whole heart electrophysiology
    DOI 10.3389/fphys.2022.907190
    Type Journal Article
    Author Gillette K
    Journal Frontiers in Physiology
    Pages 907190
    Link Publication
  • 2022
    Title Robust and efficient fixed-point algorithm for the inverse elastostatic problem to identify myocardial passive material parameters and the unloaded reference configuration
    DOI 10.1016/j.jcp.2022.111266
    Type Journal Article
    Author Marx L
    Journal Journal of Computational Physics
    Pages 111266
    Link Publication
  • 2022
    Title An accurate, robust, and efficient finite element framework with applications to anisotropic, nearly and fully incompressible elasticity
    DOI 10.1016/j.cma.2022.114887
    Type Journal Article
    Author Karabelas E
    Journal Computer Methods in Applied Mechanics and Engineering
    Pages 114887
    Link Publication
  • 2023
    Title A personalized real-time virtual model of whole heart electrophysiology
    DOI 10.1093/europace/euad122.541
    Type Journal Article
    Author Gillette K
    Journal Europace
    Link Publication
  • 2023
    Title Overall fibrosis content rather than regional differences in extracellular volume alters ventricular conduction in aortic stenosis patients
    DOI 10.1093/europace/euad122.263
    Type Journal Article
    Author Sobota V
    Journal Europace
    Link Publication
  • 2023
    Title Cell to whole organ global sensitivity analysis on a four-chamber heart electromechanics model using Gaussian processes emulators
    DOI 10.1371/journal.pcbi.1011257
    Type Journal Article
    Author Strocchi M
    Journal PLOS Computational Biology
    Link Publication
  • 2023
    Title Physics-informed Neural Network Estimation of Material Properties in Soft Tissue Nonlinear Biomechanical Models
    DOI 10.48550/arxiv.2312.09787
    Type Preprint
    Author Caforio F
  • 2020
    Title Reconstructing vascular homeostasis by growth-based prestretch and optimal fiber deposition
    DOI 10.1016/j.jmbbm.2020.104161
    Type Journal Article
    Author Wu J
    Journal Journal of the Mechanical Behavior of Biomedical Materials
    Pages 104161
    Link Publication
  • 2020
    Title A computationally efficient physiologically comprehensive 3D-0D closed-loop model of the heart and circulation
    DOI 10.48550/arxiv.2009.08802
    Type Preprint
    Author Augustin C
  • 2022
    Title An Integrated Workflow for Building Digital Twins of Cardiac Electromechanics—A Multi-Fidelity Approach for Personalising Active Mechanics
    DOI 10.3390/math10050823
    Type Journal Article
    Author Jung A
    Journal Mathematics
    Pages 823
    Link Publication
  • 2022
    Title Impact of intraventricular septal fiber orientation on cardiac electromechanical function
    DOI 10.1152/ajpheart.00050.2022
    Type Journal Article
    Author Rodríguez-Padilla J
    Journal American Journal of Physiology-Heart and Circulatory Physiology
    Link Publication
  • 2022
    Title A coupling strategy for a first 3D-1D model of the cardiovascular system to study the effects of pulse wave propagation on cardiac function
    DOI 10.1007/s00466-022-02206-6
    Type Journal Article
    Author Caforio F
    Journal Computational Mechanics
    Pages 703-722
    Link Publication
  • 2025
    Title A software benchmark for cardiac elastodynamics
    DOI 10.1016/j.cma.2024.117485
    Type Journal Article
    Author Aróstica R
    Journal Computer Methods in Applied Mechanics and Engineering
    Pages 117485
    Link Publication
  • 2024
    Title Multi-physics simulations reveal hemodynamic impacts of patient-derived fibrosis-related changes in left atrial tissue mechanics
    DOI 10.1101/2024.05.29.596526
    Type Preprint
    Author Gonzalo A
    Pages 2024.05.29.596526
    Link Publication
  • 2024
    Title Physics-informed neural network estimation of material properties in soft tissue nonlinear biomechanical models
    DOI 10.1007/s00466-024-02516-x
    Type Journal Article
    Author Caforio F
    Journal Computational Mechanics
    Pages 487-513
    Link Publication
  • 2023
    Title Computational Models of Cardiovascular Biophysics
    Type Postdoctoral Thesis
    Author Christoph Augustin
    Link Publication
  • 2021
    Title Efficient identification of myocardial material parameters and the stress-free reference configuration for patient-specific human heart models
    DOI 10.48550/arxiv.2101.04411
    Type Preprint
    Author Marx L
    Link Publication
  • 2022
    Title Exploring Role of Accessory Pathway Location in Wolff-Parkinson-White Syndrome in a Model of Whole Heart Electrophysiology
    DOI 10.22489/cinc.2022.057
    Type Conference Proceeding Abstract
    Author Gillette K
    Pages 1-4
  • 2022
    Title A Method for Incorporating Changes in Extracellular Volume and Myocyte Size Into the Cardiac Bidomain Equations
    DOI 10.22489/cinc.2022.203
    Type Conference Proceeding Abstract
    Author Sobota V
    Pages 1-4
    Link Publication
  • 2021
    Title Automated personalization of in silico left ventricular models of human electro-mechanics based on clinical data
    Type PhD Thesis
    Author Di Dr. Laura Marx
    Link Publication
  • 2024
    Title Neural network emulation of the human ventricular cardiomyocyte action potential: a tool for more efficient computation in pharmacological studies
    DOI 10.7554/elife.91911.2
    Type Preprint
    Author Augustin C
  • 2024
    Title Neural network emulation of the human ventricular cardiomyocyte action potential for more efficient computations in pharmacological studies
    DOI 10.7554/elife.91911
    Type Journal Article
    Author Grandits T
    Journal eLife
    Link Publication
  • 2024
    Title Multiphysics simulations reveal haemodynamic impacts of patient-derived fibrosis-related changes in left atrial tissue mechanics
    DOI 10.1113/jp287011
    Type Journal Article
    Author Gonzalo A
    Journal The Journal of Physiology
    Pages 6789-6812
    Link Publication
  • 2023
    Title Mechanoelectric effects in healthy cardiac function and under Left Bundle Branch Block pathology
    DOI 10.1016/j.compbiomed.2023.106696
    Type Journal Article
    Author Petras A
    Journal Computers in Biology and Medicine
    Pages 106696
    Link Publication
  • 2021
    Title A computationally efficient physiologically comprehensive 3D–0D closed-loop model of the heart and circulation
    DOI 10.1016/j.cma.2021.114092
    Type Journal Article
    Author Augustin C
    Journal Computer Methods in Applied Mechanics and Engineering
    Pages 114092
    Link Publication
  • 2021
    Title An accurate, robust, and efficient finite element framework for anisotropic, nearly and fully incompressible elasticity
    DOI 10.48550/arxiv.2111.00612
    Type Preprint
    Author Karabelas E
Datasets & models
  • 2024 Link
    Title Cardiomyocyte Emulator Training Data
    DOI 10.5281/zenodo.10640338
    Type Database/Collection of data
    Public Access
    Link Link
  • 2024 Link
    Title ForCEPSS
    Type Computer model/algorithm
    Public Access
    Link Link
  • 2024 Link
    Title pyCEPS
    Type Computer model/algorithm
    Public Access
    Link Link
  • 2021 Link
    Title Virtual cohort of extreme and average four-chamber heart meshes from statistical shape model
    DOI 10.5281/zenodo.4593738
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Virtual cohort of adult healthy four-chamber heart meshes from CT images
    DOI 10.5281/zenodo.4590293
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Virtual cohort of 1000 synthetic heart meshes from adult human healthy population
    DOI 10.5281/zenodo.4506930
    Type Database/Collection of data
    Public Access
    Link Link
  • 2020 Link
    Title Meshtool
    Type Computer model/algorithm
    Public Access
    Link Link
  • 2020 Link
    Title A Publicly Available Virtual Cohort of Four-chamber Heart Meshes for Cardiac Electro-mechanics Simulations
    DOI 10.5281/zenodo.3890033
    Type Database/Collection of data
    Public Access
    Link Link
  • 2018 Link
    Title openCARP
    DOI 10.35097/3k23ep4qffdze09u
    Type Computer model/algorithm
    Public Access
    Link Link
Software
  • 2018 Link
    Title openCARP
    Link Link
Disseminations
  • 0 Link
    Title Lecturer at the CISM-EUROMECH Advanced Course on "Computational Modelling of the heart: From Fundamentals to Clinical Applications"
    Type Participation in an activity, workshop or similar
    Link Link
  • 0 Link
    Title Participation with a booth on Digital Cardiology in the Long Night of Research 2024
    Type Participation in an open day or visit at my research institution
    Link Link
Scientific Awards
  • 2024
    Title Keynote Speaker at the International Student Congress 2024
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
Fundings
  • 2024
    Title Principal Investigator Projects
    Type Research grant (including intramural programme)
    DOI 10.55776/p 37063
    Start of Funding 2024
    Funder Austrian Science Fund (FWF)
  • 2021
    Title Walter Benjamin Programme
    Type Fellowship
    Start of Funding 2021
    Funder German Research Foundation
  • 2024
    Title Marie Skłodowska-Curie Actions (MSCA)
    Type Fellowship
    DOI 10.3030/101148636
    Start of Funding 2024
    Funder European Commission
  • 2022
    Title NIH Research Project Grant Program (R01)
    Type Research grant (including intramural programme)
    Start of Funding 2022
    Funder National Institutes of Health (NIH)

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+43 1 505 67 40

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