Illuminating the TRPC3 signaling machinery
Illuminating the TRPC3 signaling machinery
Disciplines
Biology (60%); Computer Sciences (20%); Medical-Theoretical Sciences, Pharmacy (20%)
Keywords
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Lipid Mediators,
Photopharmacology,
TRPC3,
Diacylglycerol,
Transient Receptor Potential Channels
Ion channels of the TRPC family are protein molecules (proteins) that are found in the cell membrane of almost all human cells and represent targets for the drug (pharmacological) treatment of various diseases. The name TRPC is derived from the function of these molecules in the insects where they were first discovered. A defect in the TRPC function leads to blindness in the fruit fly by shortening the reaction time of photoreceptors, which is known as the transient receptor potential (TRP) phenotype. Disturbances in the function of classical TRP molecules (TRPCs) are believed to be responsible for diseases of the nervous system (neurodegeneration), the cardiovascular system (cardiac remodeling and heart failure, cardiac arrhythmia) and the kidneys (renal failure), but also for tumor diseases. Accordingly, the development of drugs, which target TRPC channel proteins appears highly attractive for the development of new, improved therapies against these diseases. The central hurdle on the way to this development is the wide distribution of similar TRPC channels in the human body, which makes a high-specificity of the therapeutic intervention required for successful clinical application. Furthermore, it is still largely unclear whether and how certain TRPC channels in different organs of the human body differ in their function. A prominent feature of the TRPC3 protein, representing an important member of this ion channel family, is the ability to recognize its environment within the cell membrane with respect to its fat (lipid) composition. Special membrane lipids are bound to as yet not clearly identified sites within the TRPC3 molecule and thus determine its function. Recently, it has become possible to control the effect of such regulatory lipids or synthetic agents that bind to TRPC3 channels, specifically and effectively by light. The active state of regulatory lipids and also of synthetic agents can be switched on and off by light of specific wavelengths. Hence, light-mediated control of the TRPC3 function is possible without direct contact, i.e. only by light and with very high temporal and spatial precision. This method of light-mediated control of proteins and thus of organ functions is termed photopharmacology. In the present project, on the one hand, the exact molecular mechanisms of the influence of lipids and synthetic agents on TRPC3 are to be clarified and, on the other hand, strategies for a completely new and highly specific control of these molecules in diseased human tissues by photopharmacology are to be developed.
Project P 33263-B was designed to increase our knowledge about a Ca2+ permeable ion channel designated as TRPC3 (transient receptor potential channel canonical 3). This cation channel is essential for the generation of Ca2+ signals in the cells of a large variety of human tissues. TRPC3 has been proposed as a potential target for the therapy of neurological disorders such as epilepsy and cognitive dysfunction as well as neurodegeneration, but also for cardiovascular disorders, specifically for hypertension, pathologic cardiac remodeling and arrhythmia. Moreover, TRPC3 was indicated as a valuable target for the treatment of diabetes mellitus and some type of cancers. Despite an overwhelming body of evidence for a role of TRPC3 in human physiopathology, disappointingly little progress has to date been made towards therapeutic targeting of this ion channel. This shortcoming is in part caused by the lack of knowledge about the cellular control and specific regulatory structures within the TRPC3 protein. The working hypothesis for project P 33263-B builds on the concept that TRPC3 receives critical input from multiple lipids, which bind to regulatory sites within the channel complex. The overarching goal of this project was to advance the understanding of TRPC3 channels in terms of its regulation by lipids. To achieve these goal, we applied an interdisciplinary strategy that allowed for an efficient hypothesis-generation/hypothesis-testing cycle. This cycle started with computational modelling of lipid-channel interactions to identify candidate regulatory sites and critical residues within these regions of the protein. The relevance of these structures was tested by mutagenesis and electrophysiological recordings, and the functional phenotypes of TRPC3 mutations were then rigorously tested for consistency with the computational model. Moreover, the experimental strategy involved a novel approach for analyzing protein-lipid interactions. Active lipid species were introduced with high temporal and spatial precision using lipid photopharmacology. This allowed for the exposure of TRPC3 channels to well-defined levels of regulatory lipids. Overall, our work produced significant new insights into TRPC3 cellular regulation and function. Based on our results, we now propose TRPC3 as a lipid-sensitive channel that is endowed with the ability to recognize multiple regulatory lipids. We identified the mechanisms by which diacylglycerol, PIP2 and cholesterol control the activity of TRPC3 channels. Our work demonstrated that these lipids occupy distinct sites, which we currently designate as L1-L3. Moreover, we obtained evidence for allosteric communication between these lipid-sensing sites. We propose a concept in which complex lipid regulation adapts TRPC3 activity to the metabolic and functional state of tissues. Our findings pave the way towards a better understanding of the cellular role and the regulation of TRPC3 and are expected to promote the development of therapeutic interventions with TRPC3 as the target molecule.
- Medizinische Universität Wien - 32%
- Medizinische Universität Graz - 53%
- Universität Graz - 15%
- Thomas Stockner, Medizinische Universität Wien , associated research partner
- Toma Glasnov, Universität Graz , associated research partner
Research Output
- 84 Citations
- 22 Publications
- 2 Datasets & models
- 4 Scientific Awards
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2022
Title Exploring TRPC3 Interaction with Cholesterol through Coarse-Grained Molecular Dynamics Simulations DOI 10.3390/biom12070890 Type Journal Article Author Clarke A Journal Biomolecules Pages 890 Link Publication -
2022
Title Two-Dimensional Interfacial Exchange Diffusion Has the Potential to Augment Spatiotemporal Precision of Ca Signaling DOI 10.14288/1.0406619 Type Other Author Fameli N Link Publication -
2021
Title 2D interfacial exchange-diffusion has the potential to augment spatiotemporal precision of Ca2+ signalling DOI 10.22541/au.163578735.52407243/v1 Type Preprint Author Breemen C Link Publication -
2021
Title TRPC3, an underestimated, universal pacemaker channel? DOI 10.1016/j.ceca.2021.102484 Type Journal Article Author Tiapko O Journal Cell Calcium Pages 102484 -
2024
Title TRPC1: The housekeeper of the hippocampus DOI 10.1016/j.ceca.2024.102933 Type Journal Article Author Skerjanz J Journal Cell Calcium Pages 102933 Link Publication -
2024
Title LIPID COORDINATION IN TRPC CHANNELS AND THE COMMUNICATION BETWEEN TRP COMPLEXES AND MEMBRANE LIPIDS Type PhD Thesis Author Hazel Erkan-Candag -
2024
Title Unravelling the interaction of TRPC3 with its lipid environment through a coarse-grained molecular dynamics approach Type PhD Thesis Author Amy Clarke -
2023
Title Nanojunctions: Specificity of Ca2+ signalling requires nano-scale architecture of intracellular membrane contact sites DOI 10.1101/2023.02.17.528983 Type Preprint Author Fameli N Pages 2023.02.17.528983 Link Publication -
2023
Title Nanojunctions: Specificity of Ca2+ signaling requires nano-scale architecture of intracellular membrane contact sites DOI 10.1016/j.ceca.2023.102837 Type Journal Article Author Fameli N Journal Cell Calcium Pages 102837 Link Publication -
2023
Title Calcium transport and sensing in TRPC channels – New insights into a complex feedback regulation DOI 10.1016/j.ceca.2023.102816 Type Journal Article Author Baron J Journal Cell Calcium Pages 102816 -
2022
Title TRPC3 governs the spatiotemporal organization of cellular Ca2+ signatures by functional coupling to IP3 receptors DOI 10.1016/j.ceca.2022.102670 Type Journal Article Author Curcic S Journal Cell Calcium Pages 102670 -
2024
Title PIP2 modulates TRPC3 activity via TRP helix and S4-S5 linker DOI 10.1038/s41467-024-49396-6 Type Journal Article Author Clarke A Journal Nature Communications Pages 5220 Link Publication -
2024
Title De novo variants in GABRA4 are associated with a neurological phenotype including developmental delay, behavioral abnormalities and epilepsy DOI 10.1038/s41431-024-01600-3 Type Journal Article Author Sajan S Journal European Journal of Human Genetics Pages 912-919 Link Publication -
2024
Title Bidirectional Allosteric Coupling between PIP2 Binding and the Pore of the Oncochannel TRPV6 DOI 10.3390/ijms25010618 Type Journal Article Author Humer C Journal International Journal of Molecular Sciences Pages 618 Link Publication -
2023
Title Probing binding and occlusion of substrate in the human creatine transporter-1 by computation and mutagenesis DOI 10.1002/pro.4842 Type Journal Article Author Clarke A Journal Protein Science Link Publication -
2023
Title Coordinating the regulatory dance: how PIP2 modulates TRPC3 activity via TRP helix and S4-S5 linker DOI 10.21203/rs.3.rs-3552323/v1 Type Preprint Author Clarke A Link Publication -
2023
Title Arriving at the next level of complexity in IP3R and SOCE signaling DOI 10.1016/j.ceca.2023.102796 Type Journal Article Author Groschner K Journal Cell Calcium Pages 102796 -
2022
Title Two-Dimensional Interfacial Exchange Diffusion Has the Potential to Augment Spatiotemporal Precision of Ca2+ Signaling DOI 10.3390/ijms23020850 Type Journal Article Author Van Breemen C Journal International Journal of Molecular Sciences Pages 850 Link Publication -
2022
Title Characterization of DAG Binding to TRPC Channels by Target-Dependent cis–trans Isomerization of OptoDArG DOI 10.3390/biom12060799 Type Journal Article Author Erkan-Candag H Journal Biomolecules Pages 799 Link Publication -
2022
Title Diacylglycerols interact with the L2 lipidation site in TRPC3 to induce a sensitized channel state DOI 10.15252/embr.202154276 Type Journal Article Author Erkan-Candag H Journal The EMBO Reports Link Publication -
2020
Title Light-Mediated Control over TRPC3-Mediated NFAT Signaling DOI 10.3390/cells9030556 Type Journal Article Author Graziani A Journal Cells Pages 556 Link Publication -
2020
Title Mechanisms and significance of Ca2+ entry through TRPC channels DOI 10.1016/j.cophys.2020.06.005 Type Journal Article Author Bacsa B Journal Current Opinion in Physiology Pages 25-33 Link Publication
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2025
Link
Title Data set for "Diacylglycerols interact with the L2 lipidation site in TRPC3 to induce a sensitized channel state DOI 10.5281/zenodo.14761493 Type Database/Collection of data Public Access Link Link -
2024
Link
Title PIP2 modulates TRPC3 activity via TRP helix and S4-S5 linker DOI 10.5281/zenodo.11259097 Type Database/Collection of data Public Access Link Link
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2023
Title Abstract selected for additional oral presentation at the ECS Meeting 2024 (Cambridge, GB) Type Poster/abstract prize Level of Recognition Continental/International -
2023
Title Invitation as a speaker at the Cellular and Organellar Ca2+ Signaling Conference 2023 (Haifa, Israel) Type Personally asked as a key note speaker to a conference Level of Recognition Continental/International -
2023
Title Invited as a speaker at the 2023 GRC on Organellar Channels and Transporters (Barcelona, Spain) Type Personally asked as a key note speaker to a conference Level of Recognition Continental/International -
2022
Title Invited as speaker at the Ca2+ Signaling GRC 2022 (Ventura, USA) Type Personally asked as a key note speaker to a conference Level of Recognition Continental/International