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Biomolecular spectroscopy in charged helium nanodroplets

Biomolecular spectroscopy in charged helium nanodroplets

Elisabeth Gruber (ORCID: 0000-0002-1195-3638)
  • Grant DOI 10.55776/T1181
  • Funding program Hertha Firnberg
  • Status ended
  • Start September 1, 2020
  • End November 30, 2023
  • Funding amount € 243,120

Disciplines

Biology (25%); Chemistry (25%); Nanotechnology (10%); Physics, Astronomy (40%)

Keywords

    Optical Spectroscopy, Helium Nanodroplets, Biomolecules, Chlorophyll Aggregates, Photosynthesis, Photophysics

Abstract Final report

Three billion years ago, our world changed completely when cells with light-absorbing molecules found a way to capture and transform light into chemical energy. Photosynthesis became the foundation of life on Earth, providing food and energy that keeps almost every organism alive. In photosystems, light is absorbed by special pigments, which respond to different wavelengths of visible light. The primary pigment in photosystems is chlorophyll. It absorbs red and blue light most strongly and reflects green light, making plants appear green. In plants, the first step of photosynthesis starts in the chloroplasts, where light is absorbed by chlorophyll pigments. The absorbed energy is then transferred by an array of chlorophyll molecules and proteins to the reaction center, where charge separation occurs. Electrons are released into an electron transport chain, leading in the following to the synthesis of ATP (adenosine triphosphate), the energy currency of cells. Oxygen is produced as a side product. In natural photosystems, the light-to-charge conversion efficiency exceeds 95%, far higher than that in man-made photovoltaic devices. The fundamental mechanism responsible for the high efficiency of this process is still unknown. Unlocking the design principle of natural photosystems promises to improve the development of bio-inspired technologies, which mimic the natural process of photosynthesis. In this project, a new experimental setup is assembled to study systematically the influence of the interaction of chlorophyll pigments and larger aggregates (nearby pigments, water molecules, proteins) on the absorption energies for getting a deeper understanding of the energy transport as well as the light-to-charge conversion process. One-by-one, chlorophyll pigments are put together to larger aggregates and are embedded inside helium nanodroplets. Helium nanodroplets provide an ultracold (<1K) and non-viscous environment and are ideal to study molecules and molecular clusters in isolation. The new experimental setup is combined with a laser source and a suitable detection system (mass-selective detection) and opens a playground to study a wide range of larger (bio)molecular systems in a well-defined and controllable environment.

Photoactive organic molecules open up a fascinating field of research exploring the interaction of light with matter at the molecular level. Due to their unique ability to absorb light and convert it into various forms of energy, these molecules play a key role in many biological processes such as photosynthesis, as well as in the development of solar cells, and find application in photonics and sensing, photodynamic therapy, and the production of high-performance optical materials. To gain a deep understanding of their intrinsic photophysical properties and to investigate the influence of the environment on the electronic structure of these molecules, precise spectroscopic studies in a well-defined environment are essential. During the Hertha-Firnberg project, an innovative experimental setup was developed to produce cold molecular ions in the gas phase and study their interaction with light. The setup utilizes tiny helium droplets to trap molecules and cool them to temperatures below one degree Kelvin. Through controlled collisions with helium atoms, the molecules are gently released from the droplets, resulting in molecules with some helium atoms attached, which are then irradiated with a laser beam. Upon photoabsorption, the weakly bound helium atoms are lost, leading to the formation of photofragments that are subsequently detected. One particularly feature of this method is the ability to produce both positively and negatively charged molecular ions and systematically modify them, such as through the controlled attachment of individual water molecules or clustering into larger molecular complexes. By further adapting the apparatus, the research possibilities have recently been expanded. Now, in addition to producing singly charged ions, the production of multiply charged monoatomic or cluster ions is also possible, opening up new possibilities to explore their reactions with other atoms, molecules, and photons. The new experimental setup has been used to study the photoactive molecule phthalocyanine in more detail. This macrocyclic compound with an alternating nitrogen-carbon ring structure is sought after not only for its deep blue color in the dye industry but also for its unique electronic structure, making it a model system for the biologically relevant chlorophyll. Stepwise modifications of the molecules through ionization, protonation, and the attachment of individual water molecules allowed for systematic investigation of their photophysical properties.

Research institution(s)
  • Universität Innsbruck - 100%
International project participants
  • Steen Brøndsted Nielsen, Aarhus University - Denmark

Research Output

  • 98 Citations
  • 20 Publications
  • 1 Methods & Materials
  • 1 Disseminations
  • 3 Scientific Awards
  • 2 Fundings
Publications
  • 2023
    Title Charging up the cold: Formation of doubly- and triply-charged fullerene dimers in superfluid helium nanodroplets
    DOI 10.48550/arxiv.2312.05151
    Type Preprint
    Author Ganner L
  • 2023
    Title Spectroscopy of C60+ and C120+ in the mid-infrared
    DOI 10.1063/5.0176407
    Type Journal Article
    Author Kappe M
    Journal The Journal of Chemical Physics
    Pages 204302
    Link Publication
  • 2024
    Title Gas-Phase Electronic Structure of Phthalocyanine Ions: A Study of Symmetry and Solvation Effects
    DOI 10.1002/advs.202307816
    Type Journal Article
    Author Bergmeister S
    Journal Advanced Science
    Pages 2307816
    Link Publication
  • 2023
    Title Spectroscopy of helium-tagged molecular ions—Development of a novel experimental setup
    DOI 10.1063/5.0144239
    Type Journal Article
    Author Bergmeister S
    Journal Review of Scientific Instruments
    Pages 055105
    Link Publication
  • 2023
    Title Observation of Multiple Ordered Solvation Shells in Doped Helium Droplets: The Case of HeNCa2+
    DOI 10.3929/ethz-b-000608093
    Type Other
    Author Gruber
    Link Publication
  • 2022
    Title Helium structures around SF 5 + and SF 6 + : novel intermolecular potential and mass spectrometry experiments
    DOI 10.1039/d1cp04725f
    Type Journal Article
    Author Zunzunegui-Bru E
    Journal Physical Chemistry Chemical Physics
    Pages 2004-2014
    Link Publication
  • 2022
    Title Phenanthrene: establishing lower and upper bounds to the binding energy of a very weakly bound anion
    DOI 10.1039/d1cp04755h
    Type Journal Article
    Author Gruber E
    Journal Physical Chemistry Chemical Physics
    Pages 5138-5143
    Link Publication
  • 2022
    Title Solvation of Large Polycyclic Aromatic Hydrocarbons in Helium: Cationic and Anionic Hexabenzocoronene
    DOI 10.3390/molecules27196764
    Type Journal Article
    Author Kappe M
    Journal Molecules
    Pages 6764
    Link Publication
  • 2022
    Title Adsorption of Helium and Hydrogen on Triphenylene and 1,3,5-Triphenylbenzene
    DOI 10.3390/molecules27154937
    Type Journal Article
    Author Bergmeister S
    Journal Molecules
    Pages 4937
    Link Publication
  • 2024
    Title Formation of Doubly and Triply Charged Fullerene Dimers in Superfluid Helium Nanodroplets
    DOI 10.1103/physrevlett.133.023001
    Type Journal Article
    Author Ganner L
    Journal Physical Review Letters
    Pages 023001
  • 2024
    Title Doubly charged dimers and trimers of heavy noble gases
    DOI 10.1039/d4cp00465e
    Type Journal Article
    Author Schöpfer G
    Journal Physical Chemistry Chemical Physics
    Pages 11482-11490
    Link Publication
  • 2024
    Title Size limits and fission channels of doubly charged noble gas clusters
    DOI 10.1039/d4cp00658e
    Type Journal Article
    Author Stromberg I
    Journal Physical Chemistry Chemical Physics
    Pages 13923-13936
    Link Publication
  • 2023
    Title Observation of Multiple Ordered Solvation Shells in Doped Helium Droplets: The Case of He N Ca2+
    DOI 10.1021/acs.jpclett.3c00224
    Type Journal Article
    Author Zunzunegui-Bru E
    Journal The Journal of Physical Chemistry Letters
    Pages 3126-3131
    Link Publication
  • 2022
    Title Stabilization of phenanthrene anions in helium nanodroplets
    DOI 10.1039/d2cp00991a
    Type Journal Article
    Author Kollotzek S
    Journal Physical Chemistry Chemical Physics
    Pages 11662-11667
    Link Publication
  • 2021
    Title On the stability of neon cluster ions – Evidence for isomeric structures
    DOI 10.1016/j.ijms.2021.116528
    Type Journal Article
    Author Kollotzek S
    Journal International Journal of Mass Spectrometry
    Pages 116528
    Link Publication
  • 2021
    Title Electron Ionization of Size-Selected Positively and Negatively Charged Helium Droplets
    DOI 10.3390/atoms9040074
    Type Journal Article
    Author Laimer F
    Journal Atoms
    Pages 74
    Link Publication
  • 2021
    Title SF6 +: Stabilizing Transient Ions in Helium Nanodroplets
    DOI 10.1021/acs.jpclett.1c01024
    Type Journal Article
    Author Albertini S
    Journal The Journal of Physical Chemistry Letters
    Pages 4112-4117
    Link Publication
  • 2021
    Title Chemistry and physics of dopants embedded in helium droplets
    DOI 10.1002/mas.21699
    Type Journal Article
    Author Albertini S
    Journal Mass Spectrometry Reviews
    Pages 529-567
  • 2021
    Title Complexes with Atomic Gold Ions: Efficient Bis-Ligand Formation
    DOI 10.3390/molecules26123484
    Type Journal Article
    Author Duensing F
    Journal Molecules
    Pages 3484
    Link Publication
  • 2021
    Title Tuning fast excited-state decay by ligand attachment in isolated chlorophyll a
    DOI 10.1039/d1cp04356k
    Type Journal Article
    Author Gruber E
    Journal Physical Chemistry Chemical Physics
    Pages 149-155
Methods & Materials
  • 2023
    Title Development of a novel experimental setup allowing messenger spectroscopy of helium-tagged molecular ions
    Type Improvements to research infrastructure
    Public Access
Disseminations
  • 2024 Link
    Title Collaboration with the Public Relations Office
    Type A press release, press conference or response to a media enquiry/interview
    Link Link
Scientific Awards
  • 2023
    Title Invited talk
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
  • 2022
    Title Invited talk
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
  • 2022
    Title Invited talk
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
Fundings
  • 2023
    Title Spectroscopy of He-tagged photoactive (metal)organic molecules (TWF)
    Type Research grant (including intramural programme)
    Start of Funding 2023
    Funder University of Innsbruck
  • 2024
    Title Messenger spectroscopy of C60 analogues (FWF)
    Type Research grant (including intramural programme)
    Start of Funding 2024
    Funder University of Innsbruck

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