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Learning Synchronization Patterns in Neural Signal

Learning Synchronization Patterns in Neural Signal

Claudia Plant (ORCID: 0000-0001-5274-8123)
  • Grant DOI 10.55776/I5113
  • Funding program Principal Investigator Projects International
  • Status ended
  • Start October 1, 2021
  • End September 30, 2025
  • Funding amount € 421,754

CEUS: Österreich - Polen - Slowenien - Tschechien

Disciplines

Other Human Medicine, Health Sciences (100%)

Keywords

    Synchronization, EEG signal, Data mining, Granger causality, Convolutional Neural Network, Prediction Of Response To Antidepressants

Abstract Final report

The human brain is the most complex system studied by science and bringing inspiration for emerging technologies. Over the last decade, the study of brain function has witnessed a pivotal change of focus from investigating the localization of specialized brain areas to investigation of spatially distributed brain networks. This paradigm shift was possible due to intensive development in the field of synchronization of nonlinear systems. In the proposed project we will use the concept of synchronization of nonlinear dynamical systems as the basis for development of the methods and algorithms for detection, characterization and modelling of interactions and dependence patterns in multivariate nonlinear time series. In particular, we will test changes of synchronization patterns of scalp electroencephalogram (EEG) of depressive patients as predictors of antidepressant therapeutic efficacy. We will tailor the developed methods to specific properties of EEG, in order to better understand synchronization phenomena in the human brain. The overall structure of EEG synchronization i.e. the synchronization patterns - will be considered as an approach for description of brain states and their changes due to mental disorders. The developed methods will be applicable not only in analysis of electrophysiological signals in neurology and psychiatry, but generally in analysis of complex multivariate and multiscale signals. We will classify the EEG synchronization patterns and their changes by computer science methods inspired by the brain itself neural networks, machine learning an data mining. The particular application, proposed in the project, promises high impact for society, since depression is a major cause of morbidity worldwide. In EU countries the occurrence of depressive disorders counts between 2.6 4.5% for males and 7.1 10.4% for females. Modern antidepressant drugs have a response rate only up to 65% and the response requires usually 46 weeks of treatment. Potential ability to predict response to treatment, either early in the course of therapy or before treatment even begins, can avoid trials of ineffective therapy and save patients from prolonged intervals of suffering. Also economic aspects of the possibility of early choice of an effective therapy are indisputable.

Being able to tell early whether an antidepressant will help a person with major depression could spare patients weeks of uncertainty and suffering. In this project, we showed that non-invasive brainwave recordings taken after just one week of treatment can be used to predict the likely treatment outcome with promising accuracy. Depression is a common and serious illness that affects daily life, work, and relationships. Globally, hundreds of millions of people live with depression. Although effective treatments exist, many patients do not benefit sufficiently from the first medication that is tried. In clinical practice, doctors often need about 4-6 weeks before they can confidently judge whether a medication is working, which can delay switching to a more suitable option. To address this, we analyzed electrical brain activity recordings (EEG) from patients on day 7 of antidepressant treatment. We tested different ways of describing these EEG signals, i.e. we extracted different features from the EEG recordings primarily capturing synchronization patterns between brain regions, and trained machine learning models to learn the difference between people who later improved and those who did not. In addition, we explored whether patients can be grouped into meaningful subtypes based on similarities in their brain activity patterns-an approach that may help explain why the same treatment works well for some people but not for others. The strongest results came from focusing on short, recurring signal patterns in the EEG (a "motif"-based approach). Using this method, we correctly predicted treatment outcome for 73% of patients in an independent validation group. This is a key scientific advance: it demonstrates that early EEG patterns can contain practical information about later treatment success, and it identifies a particularly effective way to extract that information. If confirmed in larger studies, this approach could support earlier, more personalized treatment decisions-helping patients reach an effective therapy sooner, reducing avoidable side effects and suffering, and potentially saving healthcare resources.

Research institution(s)
  • Universität Wien - 100%
Project participants
  • Katerina Schindlerova, Universität Wien , national collaboration partner
International project participants
  • Milan Palus, Academy of Sciences of the Czech Republic - Czechia
  • Martin Brunovsky, National Institute of Mental Health - USA

Research Output

  • 17 Publications
  • 1 Datasets & models
  • 2 Scientific Awards
Publications
  • 2025
    Title Breaking the Reclustering Barrier in Centroid-based Deep Clustering
    Type Conference Proceeding Abstract
    Author Lukas Miklautz
    Conference International Conference on Learning Representations
    Link Publication
  • 2025
    Title Ultrametric Cluster Hierarchies: I Want 'em All!
    DOI 10.48550/arxiv.2502.14018
    Type Preprint
    Author Draganov A
    Link Publication
  • 2025
    Title EEG-Based Classification in Psychiatry Using Motif Discovery
    DOI 10.1016/j.neuri.2025.100242
    Type Journal Article
    Author Hlaváčková-Schindler K
    Journal Neuroscience Informatics
  • 2024
    Title Mining High-dimensional Data with Applications in Medicine
    Type PhD Thesis
    Author Lena Greta Marie Bauer
    Link Publication
  • 2024
    Title Causal Inference by Compression Schemes
    Type Postdoctoral Thesis
    Author Katerina Hlavácková-Schindler
  • 2024
    Title Journal of Machine Learning Research
    Type Journal Article
    Author Hlaváčková-Schindler
    Journal Granger Causal Inference in Multivariate Hawkes Processes by Minimum Message Length
    Pages 26
  • 2024
    Title Prototyp-basiertes Lernen von Repräsentationen mittels Deep Clustering
    Type Other
    Author Lukas Miklautz
    Link Publication
  • 2024
    Title Mining high-dimensional data with applications in medicine
    Type Other
    Author Lena Greta Marie Bauer
    Link Publication
  • 2024
    Title Contrastive Tuning: A Little Help to Make Masked Autoencoders Forget
    DOI 10.1609/aaai.v38i4.28078
    Type Journal Article
    Author Alkin B
    Journal Proceedings of the AAAI Conference on Artificial Intelligence
  • 2023
    Title Pattern Discovery in an EEG Database of Depression Patients: Preliminary Results
    DOI 10.23919/measurement59122.2023.10164584
    Type Conference Proceeding Abstract
    Author Hlaváčková-Schindler K
    Pages 80-83
  • 2023
    Title Application of Deep Clustering Algorithms
    DOI 10.1145/3583780.3615290
    Type Conference Proceeding Abstract
    Author Leiber C
    Pages 5208-5211
  • 2023
    Title Benchmarking Deep Clustering Algorithms With ClustPy
    DOI 10.1109/icdmw60847.2023.00087
    Type Conference Proceeding Abstract
    Author Leiber C
    Pages 625-632
  • 2023
    Title Causal Inference for Heterogeneous Data and Information Theory.
    DOI 10.3390/e25060910
    Type Journal Article
    Author Hlaváčková-Schindler K
    Journal Entropy (Basel, Switzerland)
  • 2023
    Title Causal Inference for Heterogeneous Data and Information Theory
    DOI 10.3390/books978-3-0365-8051-7
    Type Book
    editors Hlaváčková-Schindler K
    Publisher MDPI
  • 2023
    Title Granger Causal Inference in Multivariate Hawkes Processes by Minimum Message Length
    DOI 10.48550/arxiv.2309.02027
    Type Preprint
    Author Hlavackova-Schindler K
    Link Publication
  • 2022
    Title Causal Discovery in Hawkes Processes by Minimum Description Length
    DOI 10.1609/aaai.v36i6.20656
    Type Journal Article
    Author Hlaváčková-Schindler K
    Journal Proceedings of the AAAI Conference on Artificial Intelligence
  • 2023
    Title Spectral Clustering of Attributed Multi-relational Graphs*
    Type Conference Proceeding Abstract
    Author Ylli Sadikaj
    Conference 19th International Workshop on Mining and Learning with Graphs
    Link Publication
Datasets & models
  • 2023 Link
    Title Pattern Discovery in an EEG Database of Depression Patients: Preliminary Results
    Type Computer model/algorithm
    Public Access
    Link Link
Scientific Awards
  • 2024
    Title Staatspreis für die Dissertation von Lukas Miklautz
    Type National honour e.g. Order of Chivalry, OBE
    Level of Recognition National (any country)
  • 2024
    Title Invited keynote talk at IEEE ICDM International Conference on Data Mining
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International

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