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Class III cellobiose dehydrogenases: the missing link?

Class III cellobiose dehydrogenases: the missing link?

Roland Ludwig (ORCID: 0000-0002-5058-5874)
  • Grant DOI 10.55776/I5299
  • Funding program Principal Investigator Projects International
  • Status ended
  • Start October 1, 2021
  • End March 31, 2025
  • Funding amount € 379,512

Bilaterale Ausschreibung: Russland

Disciplines

Biology (70%); Industrial Biotechnology (30%)

Keywords

    Cellobiose Dehydrogenase, Fungal Enzymes, Hemoflavoenzymes, Substrate Specificity, Screening, Protein Characterization

Abstract Final report

Cellobiose dehydrogenase (CDH) is an enzyme secreted by biomass degrading fungi. The physiological function of CDH has been unknown for a long time before its physiological partner enzyme, the biomass-degrading lytic polysaccharide monooxygenase (LPMO), was discovered. CDH acts as an auxiliary enzyme to LPMO and delivers electrons and hydrogen peroxide to LPMO. With the help of CDH, LPMO cleaves plant-based polysaccharides like cellulose, starch or hemicelluloses. Many newly discovered LPMOs show different substrate specificities exerting their degrading function towards various hemicelluloses. However, the currently known CDHs all use cello-oligosaccharides like cellobiose as substrate. The oligosaccharides produced by LPMO from hemicelluloses cannot be used by the currently known CDHs. This raises the question on how the newly discovered LPMOs can be regenerated by CDH? The, for a long-time known, phylogenetic Class III CDHs, which could so far not be isolated or recombinantly expressed, might be the missing link to hemicellulose-degrading LPMOs. A cooperation between Austrian researchers from BOKUUniversity of Natural Resources and Life Sciences, Vienna and the Skryabin Institute of the Russian Academy of Sciences, Moscow, investigates the distribution of Class III CDHs in fungi and their correlation with LPMOs. Class III CDHs will be isolated from the culture collection available at the Skryabin Institute or recombinantly expressed in yeasts or fungi. Obtained CDHs will be biochemically characterized to test the following hypothesis: Class III CDHs can convert hemicellulose-derived oligosaccharides to supply hemicellulose-degrading LPMOs with electrons and hydrogen peroxide. Class III CDHs might be the missing link to explore new routes for the degradation of plant biomass polysaccharides and a positive outcome of this project will support the usage of renewables for a bio-based economy.

Cellobiose dehydrogenase (CDH) is an enzyme secreted by biomass degrading fungi. The physiological function of CDH has been unknown for a long time before its physiological partner enzyme, the biomass-degrading lytic polysaccharide monooxygenase (LPMO), was discovered. CDH acts as an auxiliary enzyme to LPMO and delivers electrons and hydrogen peroxide to LPMO. With the help of CDH, LPMO cleaves plant-based polysaccharides like cellulose, starch or hemicelluloses. Many newly discovered LPMOs show different substrate specificities exerting their degrading function towards various hemicelluloses. However, the currently known CDHs all use cello-oligosaccharides like cellobiose as substrate. The oligosaccharides produced by LPMO from hemicelluloses cannot be used by the currently known CDHs. This raises the question on how the newly discovered LPMOs can be regenerated by CDH? The, for a long-time known, phylogenetic Class III CDHs, which was for the first time recombinantly expressed in this project, was considered the missing link to hemicellulose-degrading LPMOs. A cooperation between Austrian researchers from BOKU University in an Austrian Science Fund (FWF) funded project was able to characterise a Class III CDHs from the plant pathogen fungus Fusarium solani for their first time. Biochemical and electrochemical characterisation showed, that the substrate specificity does not differ from the well-known other classes. An absolutely interesting protperty of the newly described Fusarium solani CDH is its lack of oxygen reactivity, which points towards a different interaction mechanism with LPMOs.

Research institution(s)
  • Universität für Bodenkultur Wien - 100%
Project participants
  • Florian Csarman, Universität für Bodenkultur Wien , national collaboration partner
International project participants
  • Marina P. Kolomytseva, Russian Academy of Sciences - Russia

Research Output

  • 27 Citations
  • 8 Publications
  • 1 Methods & Materials
  • 1 Disseminations
  • 1 Scientific Awards
Publications
  • 2025
    Title Interaction of class III cellobiose dehydrogenase with lytic polysaccharide monooxygenase
    DOI 10.1002/2211-5463.70067
    Type Journal Article
    Author Giorgianni A
    Journal FEBS Open Bio
    Pages 1618-1628
    Link Publication
  • 2025
    Title Screening and Characterization of a Class III Cellobiose Dehydrogenase
    Type PhD Thesis
    Author Angela Giorgianni
  • 2024
    Title Exploring class III cellobiose dehydrogenase: sequence analysis and optimized recombinant expression
    DOI 10.1186/s12934-024-02420-2
    Type Journal Article
    Author Giorgianni A
    Journal Microbial Cell Factories
    Pages 146
    Link Publication
  • 2024
    Title Kinetic and Substrate Specificity Determination of Bacterial LPMOs
    DOI 10.1021/acscatal.4c04510
    Type Journal Article
    Author Carletti A
    Journal ACS Catalysis
    Pages 14586-14594
  • 2024
    Title Electron transfer of haemoflavoenzymes and cytochromes on electrodes, in polymer films and in solution
    Type PhD Thesis
    Author Kwankao Karnpakdee
    Link Publication
  • 2024
    Title Electron Transfer of Cellobiose Dehydrogenase in Polyethyleneimine Films
    DOI 10.1002/celc.202300679
    Type Journal Article
    Author Karnpakdee K
    Journal ChemElectroChem
    Link Publication
  • 2024
    Title Electrochemical Monitoring of Heterogeneous Peroxygenase Reactions Unravels LPMO Kinetics
    DOI 10.1021/acscatal.3c05194
    Type Journal Article
    Author Schwaiger L
    Journal ACS Catalysis
    Pages 1205-1219
    Link Publication
  • 2022
    Title Electrochemical Methods for the Characterization of Enzymatic Activity on Lignocellulose
    Type PhD Thesis
    Author Hucheng Chang
    Link Publication
Methods & Materials
  • 2024 Link
    Title Electrochemical determination of hydrogen peroxide consuming enzymes
    Type Technology assay or reagent
    Public Access
    Link Link
Disseminations
  • 2024
    Title Long Night of Research
    Type Participation in an open day or visit at my research institution
Scientific Awards
  • 2024
    Title Green Conference on Natural Resources, Green Technology & Sustainable Development 2024 in Zagreb, Croatia
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International

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