Disciplines
Biology (90%); Chemistry (10%)
Keywords
Glycosynthase,
Glycosidase mechanism,
Agrobacterium sp.,
Directed evolution,
Fluorosugar,
Glycobiology
Abstract
Carbohydrates have important functions in many biological processes, such as cell recogniton, cell migration and
signaling events. Chemical synthesis of these complex molecules is still a very challenging task and can hardly be
automated. Thus, enzymatic derivatisation is not only a considered but essentially the only efficient alternative
methodology to synthetic chemistry. In this context, glycosyltranferases and glycosidases have been studied to
some extent. In addition to these, a new breed of enzymes, namely glycosynthases have recently been introduced. I
attempt to work on this novel group of enzymes and plan to further improve the usability of the Abg glycosynthase.
This class of enzymes is derived from glycosidases, but, since altered in one key amino acid within the acitve site,
they do not hydrolyse substrates but, due to the still working transglycosylation activity, can now efficiently
polymerize modified sugar oligomers. Yet, only a few examples of glycosynthases are published by now. My
intention is to increase the useful repertoire of glycosynthases by enhancing the activity of the well characterized
glucosynthase of Agrobacterium sp. by means of site directed mutagenesis as well as directed evolution.
Furthermore, I plan to shift the substrate specificity of this enzyme to xyloside and change the regioselectivity of
this transfer. Eventually, identified mutant enzymes will be analysed for there usability to synthesise modified
carbohydrate compounds.
I hope to gain insights that lead to a better understanding of the molecular mechanism of how glycosynthases work
which in due course may be helpful to broaden their usability for carbohydrate chemistry.