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Metabolomics to investigate combined cancer therapy

Metabolomics to investigate combined cancer therapy

Benedikt Fritz Warth (ORCID: 0000-0002-6104-0706)
  • Grant DOI 10.55776/J3808
  • Funding program Erwin Schrödinger
  • Status ended
  • Start June 1, 2016
  • End May 31, 2017
  • Funding amount € 50,900

Disciplines

Chemistry (70%); Medical-Theoretical Sciences, Pharmacy (30%)

Keywords

    Metabolomics, Mass Spectrometry, Cancer Research, Zearalenone, Genistein, Stable Isotopes

Abstract Final report

Breast cancer is the leading type of cancer in women worldwide and accounts for about 25% of all cases with steadily increasing rates. Most breast cancers require estrogens for their growth and risk factors for this disease include also exposure towards estrogens through the diet or the environment. In the research project Metabolomics to investigate combined cancer therapy the molecular basics of a novel, highly promising anti-cancer drug (palbociclib) will be investigated in detail. The combined treatment with a current standard anti-cancer drug as well as the impact of two estrogens which occur naturally in our food will be evaluated. Thereby, we intend to better understand the mode of action of the combined treatment. The effect of the dietary estrogens will be studied to prove whether or not they influence this therapy. To measure the response of breast cancer cells on the different treatments we will use highly innovative and comprehensive analytical platforms, which are able to detect thousands of small molecules simultaneously. These so-called metabolomics platforms will enable us to directly look into the metabolism of cancer cells. A novel technique, the global isotope metabolomics approach will be applied for the first time in cancer research within the course of this project. It is expected that the project results in a deeper knowledge of the mode of action of the novel combined breast cancer treatment and the impact of dietary estrogens. As a long-term goal it is hoped that the new insights will contribute to enhance future anti-breast cancer drug developments and therapies.

Breast cancer is the leading type of cancer in women worldwide and accounts for about 25% of all cases with steadily increasing rates. Most breast cancers require estrogens for their growth and risk factors for this disease include also exposure towards estrogens through the diet or the environment. In the research project Metabolomics to investigate combined cancer therapy the molecular basics of a novel, highly promising anti-cancer drug (palbociclib) was investigated in detail using innovative mass spectrometry and cloud-based data processing methodology. The combined treatment with a current standard anti-cancer drug (letrozole) as well as the impact of two estrogens which occur naturally in our food were evaluated. To measure the response of breast cancer cells on the different treatments we used highly innovative and comprehensive analytical platforms, which were able to detect a myriad of small molecules simultaneously. These so-called metabolomics platforms enabled us to directly look into the metabolism of cancer cells. Applying these new techniques, we found that amino acid metabolism, the central energy metabolism and lipid metabolism are the key points of significant alterations upon the combined cancer therapy. Moreover, we saw a very distinct effect of two model dietary estrogens, the plan hormone genistein and the mycotoxin zearalenone, on several of the affected metabolites. The project resulted in a deeper knowledge of the mode of action of the novel combined breast cancer treatment and the impact of dietary estrogens. As a long-term goal it is hoped that the new insights gained will contribute to a more effective development of breast cancer therapies and lead to science-based nutritional recommendations for cancer patients.

Research institution(s)
  • The Scripps Research Institute - 100%

Research Output

  • 346 Citations
  • 10 Publications
Publications
  • 2019
    Title Palbociclib and Fulvestrant Act in Synergy to Modulate Central Carbon Metabolism in Breast Cancer Cells
    DOI 10.3390/metabo9010007
    Type Journal Article
    Author Warth B
    Journal Metabolites
    Pages 7
    Link Publication
  • 2019
    Title A fiber-deprived diet disturbs the fine-scale spatial architecture of the murine colon microbiome
    DOI 10.1038/s41467-019-12413-0
    Type Journal Article
    Author Riva A
    Journal Nature Communications
    Pages 4366
    Link Publication
  • 2020
    Title Metabolomics Profiles of Smokers from Two Ethnic Groups with Differing Lung Cancer Risk
    DOI 10.1021/acs.chemrestox.0c00064
    Type Journal Article
    Author Dator R
    Journal Chemical Research in Toxicology
    Pages 2087-2098
    Link Publication
  • 2018
    Title Metabolomics Reveals that Dietary Xenoestrogens Alter Cellular Metabolism Induced by Palbociclib/Letrozole Combination Cancer Therapy
    DOI 10.1016/j.chembiol.2017.12.010
    Type Journal Article
    Author Warth B
    Journal Cell Chemical Biology
    Link Publication
  • 2017
    Title Metabolizing Data in the Cloud
    DOI 10.1016/j.tibtech.2016.12.010
    Type Journal Article
    Author Warth B
    Journal Trends in Biotechnology
    Pages 481-483
    Link Publication
  • 2018
    Title Palbociclib and fulvestrant act in synergy to modulate central carbon metabolism in breast cancer cells
    DOI 10.1101/348722
    Type Preprint
    Author Warth B
    Pages 348722
    Link Publication
  • 2017
    Title Exposing the Exposome with Global Metabolomics and Cognitive Computing
    DOI 10.1101/145722
    Type Preprint
    Author Warth B
    Pages 145722
    Link Publication
  • 2017
    Title Exposome-Scale Investigations Guided by Global Metabolomics, Pathway Analysis, and Cognitive Computing
    DOI 10.1021/acs.analchem.7b02759
    Type Journal Article
    Author Warth B
    Journal Analytical Chemistry
    Pages 11505-11513
    Link Publication
  • 2017
    Title Metabolomics reveals that dietary xenoestrogens alter cellular metabolism induced by palbociclib/letrozole combination cancer therapy
    DOI 10.1101/188102
    Type Preprint
    Author Warth B
    Pages 188102
    Link Publication
  • 2021
    Title Elucidation of xenoestrogen metabolism by non-targeted, stable isotope-assisted mass spectrometry in breast cancer cells
    DOI 10.1016/j.envint.2021.106940
    Type Journal Article
    Author Flasch M
    Journal Environment International
    Pages 106940
    Link Publication

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