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Role of lake-catchment-atmosphere linkages for bacteria

Role of lake-catchment-atmosphere linkages for bacteria

Ruben Sommaruga (ORCID: 0000-0002-1055-2461)
  • Grant DOI 10.55776/P19245
  • Funding program Principal Investigator Projects
  • Status ended
  • Start August 1, 2006
  • End March 31, 2011
  • Funding amount € 284,948
  • Project website

Disciplines

Biology (100%)

Keywords

    Aquatic microbial ecology, Allochthonous input, Heterotrophic bacteria, Lake metabolism, Single-cell activity, Alpine lakes

Abstract Final report

Alpine lakes are characterized by small catchment areas and dissolved organic carbon (DOC) concentrations generally below 1 mg L-1 . Consequently, their waters are very transparent to solar ultraviolet radiation (UVR). Although being remote these ecosystems are particularly sensitive to climate change and can be influenced by long-range transport of nutrients and microorganisms associated to aerosols. The increase in air temperatures as a consequence of climate warming seems to enhance the linkages between atmosphere, catchment, and high- mountain lakes. Because of their very low nutrient and DOC content, allochthonous dissolved organic matter (DOM) inputs might have particularly marked consequences for the bacterial assemblage of alpine lakes. The community structure and functioning of heterotrophic bacteria in high-mountain lake remains still poorly understood. Recent methodological developments have permitted to determine that the bacterial community from these ecosystems is often dominated by few bacterial groups, particularly Actinobacteria and the R-BT group of ß- Proteobacteria appear to be key actors in these systems, yet exhibiting a different strategy. Nevertheless, knowledge on the consequences of compositional changes for the functioning (production, respiration) of the heterotrophic bacterial assemblage is still scarce in these and other type of lakes. During the 3-year project, we aim to evaluate the importance of the atmospheric and terrestrial compartments as a source of organic nutrients and heterotrophic bacteria to two alpine lakes, as well as to assess how the autochthonous bacterial assemblage respond to these allochthonous inputs. In addition, we will assess to which extend temporal shifts in the bacterial community structure relate to the functioning of the lake and how UVR may affect the balance between bacterial production and respiration. To test the five hypotheses defined in this project, we will conduct both field and laboratory activities using a combination of methods to estimate the abundance (flow cytometry), activity (microautoradiography), growth efficiency (calculated from bacterial production and respiration measurements), and composition of bacterioplankton as tracked by the CARD- FISH method. Results obtained in this project will fundamentally contribute to understand the importance of linkages between the terrestrial, atmospheric, and aquatic compartment and their consequences for the heterotrophic bacterial assemblage, and thus for the biogeochemical cycle of carbon in alpine lakes.

Alpine lakes are characterized by small catchment areas and dissolved organic carbon (DOC) concentrations generally below 1 mg L-1 . Consequently, their waters are very transparent to solar ultraviolet radiation (UVR). Although being remote these ecosystems are particularly sensitive to climate change and can be influenced by long-range transport of nutrients and microorganisms associated to aerosols. The increase in air temperatures as a consequence of climate warming seems to enhance the linkages between atmosphere, catchment, and high- mountain lakes. Because of their very low nutrient and DOC content, allochthonous dissolved organic matter (DOM) inputs might have particularly marked consequences for the bacterial assemblage of alpine lakes. The community structure and functioning of heterotrophic bacteria in high-mountain lake remains still poorly understood. Recent methodological developments have permitted to determine that the bacterial community from these ecosystems is often dominated by few bacterial groups, particularly Actinobacteria and the R-BT group of ß- Proteobacteria appear to be key actors in these systems, yet exhibiting a different strategy. Nevertheless, knowledge on the consequences of compositional changes for the functioning (production, respiration) of the heterotrophic bacterial assemblage is still scarce in these and other type of lakes. During the 3-year project, we aim to evaluate the importance of the atmospheric and terrestrial compartments as a source of organic nutrients and heterotrophic bacteria to two alpine lakes, as well as to assess how the autochthonous bacterial assemblage respond to these allochthonous inputs. In addition, we will assess to which extend temporal shifts in the bacterial community structure relate to the functioning of the lake and how UVR may affect the balance between bacterial production and respiration. To test the five hypotheses defined in this project, we will conduct both field and laboratory activities using a combination of methods to estimate the abundance (flow cytometry), activity (microautoradiography), growth efficiency (calculated from bacterial production and respiration measurements), and composition of bacterioplankton as tracked by the CARD- FISH method. Results obtained in this project will fundamentally contribute to understand the importance of linkages between the terrestrial, atmospheric, and aquatic compartment and their consequences for the heterotrophic bacterial assemblage, and thus for the biogeochemical cycle of carbon in alpine lakes.

Research institution(s)
  • Universität Innsbruck - 100%
International project participants
  • Isabel Reche, Universidad de Granada - Spain

Research Output

  • 2727 Citations
  • 25 Publications
Publications
  • 2007
    Title Interactive effects of solar radiation and dissolved organic matter on bacterial activity and community structure
    DOI 10.1111/j.1462-2920.2007.01334.x
    Type Journal Article
    Author Pérez M
    Journal Environmental Microbiology
    Pages 2200-2210
    Link Publication
  • 2007
    Title Suitability of Flow Cytometry for Estimating Bacterial Biovolume in Natural Plankton Samples: Comparison with Microscopy Data
    DOI 10.1128/aem.00733-07
    Type Journal Article
    Author Felip M
    Journal Applied and Environmental Microbiology
    Pages 4508-4514
    Link Publication
  • 2007
    Title Crash of a population of the marine heterotrophic flagellate Cafeteria roenbergensis by viral infection
    DOI 10.1111/j.1462-2920.2007.01378.x
    Type Journal Article
    Author Massana R
    Journal Environmental Microbiology
    Pages 2660-2669
  • 2015
    Title Dissolved organic monomer partitioning among bacterial groups in two oligotrophic lakes
    DOI 10.1111/1758-2229.12240
    Type Journal Article
    Author Pérez M
    Journal Environmental Microbiology Reports
    Pages 265-272
    Link Publication
  • 2014
    Title Bacterial diversity and composition during rain events with and without Saharan dust influence reaching a high mountain lake in the Alps
    DOI 10.1111/1758-2229.12175
    Type Journal Article
    Author Peter H
    Journal Environmental Microbiology Reports
    Pages 618-624
    Link Publication
  • 2013
    Title Identification of bone morphogenetic protein 7 (BMP7) as an instructive factor for human epidermal Langerhans cell differentiation
    DOI 10.1084/jem.20130275
    Type Journal Article
    Author Yasmin N
    Journal Journal of Experimental Medicine
    Pages 2597-2610
    Link Publication
  • 2012
    Title Identification of Axl as a downstream effector of TGF-ß1 during Langerhans cell differentiation and epidermal homeostasis
    DOI 10.1084/jem.20120493
    Type Journal Article
    Author Bauer T
    Journal Journal of Experimental Medicine
    Pages 2033-2047
    Link Publication
  • 2011
    Title Dust inputs and bacteria influence dissolved organic matter in clear alpine lakes
    DOI 10.1038/ncomms1411
    Type Journal Article
    Author Mladenov N
    Journal Nature Communications
    Pages 405
    Link Publication
  • 2011
    Title Temporal changes in the dominance of major planktonic bacterial groups in an alpine lake: discrepancy with their contribution to bacterial production
    DOI 10.3354/ame01505
    Type Journal Article
    Author Pérez M
    Journal Aquatic Microbial Ecology
    Pages 161-170
    Link Publication
  • 2013
    Title ß-Catenin Promotes the Differentiation of Epidermal Langerhans Dendritic Cells
    DOI 10.1038/jid.2012.481
    Type Journal Article
    Author Yasmin N
    Journal Journal of Investigative Dermatology
    Pages 1250-1259
    Link Publication
  • 2013
    Title Away from darkness: a review on the effects of solar radiation on heterotrophic bacterioplankton activity
    DOI 10.3389/fmicb.2013.00131
    Type Journal Article
    Author Ruiz-González C
    Journal Frontiers in Microbiology
    Pages 131
    Link Publication
  • 2013
    Title Temporal Changes and Altitudinal Distribution of Aerobic Anoxygenic Phototrophs in Mountain Lakes
    DOI 10.1128/aem.01526-13
    Type Journal Article
    Author Cuperová Z
    Journal Applied and Environmental Microbiology
    Pages 6439-6446
    Link Publication
  • 2009
    Title Differences in UV transparency and thermal structure between alpine and subalpine lakes: implications for organisms
    DOI 10.1039/b905616e
    Type Journal Article
    Author Rose K
    Journal Photochemical & Photobiological Sciences
    Pages 1244-1256
    Link Publication
  • 2008
    Title An evaluation of methods to study the gut bacterial community composition of freshwater zooplankton
    DOI 10.1093/plankt/fbn061
    Type Journal Article
    Author Peter H
    Journal Journal of Plankton Research
    Pages 997-1006
    Link Publication
  • 2008
    Title Spatiotemporal drivers of dissolved organic matter in high alpine lakes: Role of Saharan dust inputs and bacterial activity
    DOI 10.1029/2008jg000699
    Type Journal Article
    Author Mladenov N
    Journal Journal of Geophysical Research: Biogeosciences
    Link Publication
  • 2010
    Title Contribution of mycosporine-like amino acids and colored dissolved and particulate matter to sea ice optical properties and ultraviolet attenuation
    DOI 10.4319/lo.2010.55.2.0703
    Type Journal Article
    Author Uusikivi J
    Journal Limnology and Oceanography
    Pages 703-713
    Link Publication
  • 2010
    Title Contribution of mycosporine-like amino acids and colored dissolved and particulate matter to sea ice optical properties and ultraviolet attenuation.
    DOI 10.4319/lo.2009.55.2.0703
    Type Journal Article
    Author Uusikivi J
    Journal Limnology and oceanography
    Pages 703-713
    Link Publication
  • 2009
    Title Bacterial ‘cosmopolitanism’ and importance of local environmental factors for community composition in remote high-altitude lakes
    DOI 10.1111/j.1365-2427.2008.02146.x
    Type Journal Article
    Author Sommaruga R
    Journal Freshwater Biology
    Pages 994-1005
    Link Publication
  • 2009
    Title Contrasting ability to take up leucine and thymidine among freshwater bacterial groups: implications for bacterial production measurements
    DOI 10.1111/j.1462-2920.2009.02043.x
    Type Journal Article
    Author Pérez M
    Journal Environmental Microbiology
    Pages 74-82
    Link Publication
  • 2009
    Title Lakes as sentinels of climate change
    DOI 10.4319/lo.2009.54.6_part_2.2283
    Type Journal Article
    Author Adrian R
    Journal Limnology and Oceanography
    Pages 2283-2297
    Link Publication
  • 2009
    Title Alteration of chromophoric dissolved organic matter by solar UV radiation causes rapid changes in bacterial community composition
    DOI 10.1039/b905040j
    Type Journal Article
    Author Piccini C
    Journal Photochemical & Photobiological Sciences
    Pages 1321-1328
    Link Publication
  • 2009
    Title Perspectives and research on environmental effects of ultraviolet radiation
    DOI 10.1039/b915307c
    Type Journal Article
    Author Sommaruga R
    Journal Photochemical & Photobiological Sciences
    Pages 1217-1217
    Link Publication
  • 2010
    Title Contrasting effects of ultraviolet radiation on the growth efficiency of freshwater bacteria
    DOI 10.1007/s10452-010-9341-9
    Type Journal Article
    Author Hörtnagl P
    Journal Aquatic Ecology
    Pages 125-136
    Link Publication
  • 2010
    Title The bacterial community composition of the surface microlayer in a high mountain lake
    DOI 10.1111/j.1574-6941.2010.00904.x
    Type Journal Article
    Author Hörtnagl P
    Journal FEMS Microbiology Ecology
    Pages 458-467
    Link Publication
  • 2010
    Title Living at the border: A community and single-cell assessment of lake bacterioneuston activity
    DOI 10.4319/lo.2010.55.3.1134
    Type Journal Article
    Author Hörtnagl P
    Journal Limnology and Oceanography
    Pages 1134-1144
    Link Publication

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