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Synthetic TLR4-MD-2-dependent endotoxin mimetics

Synthetic TLR4-MD-2-dependent endotoxin mimetics

Alla Zamyatina (ORCID: 0000-0002-4001-3522)
  • Grant DOI 10.55776/P22116
  • Funding program Principal Investigator Projects
  • Status ended
  • Start March 1, 2010
  • End February 28, 2015
  • Funding amount € 390,316

Disciplines

Chemistry (80%); Health Sciences (10%); Medical-Theoretical Sciences, Pharmacy (10%)

Keywords

    Synthesis, Lipopolysaccharide, Carbohydrates, Lipid A, Glycophospholipid, Glycosylation

Abstract Final report

Endotoxins (LPS, lipopolysaccharides) are unique, highly abundant surface glycolipids of Gram-negative bacteria, which are capable to potently induce proinflammatory responses in mammalian host by TLR4-MD-2 -dependent cell activation. Homodimerization of TLR4, which leads to the activation of the intracellular signaling cascade, is triggered directly by MD-2 - bound LPS, with electrostatic forces and hydrophobic interactions governing the structural adjustment of endotoxin-receptor complex and the geometry of the endotoxically active conformation of lipid A. It remains unclear which conformational rearrangements occur to lipid A upon its binding to TLR4-MD-2 complex, followed by receptor dimerization, wherein acyl chains of lipid A directly participate in the cross-linking of the neighbouring TLR4 and receptor clustering. The spatial arrangement of acyl chains in lipid A significantly depends on the relative orientation of GlcN sugar rings of the lipid A backbone, which, in turn, is reflected by the dihedral angles of hydroxymethyl fragment of reducing GlcN engaged in the 1 6 O-glycosidic linkage. To assess the influence of hydroxymethyl dihedrals of diglucosamine backbone of lipid A on its endotoxic potential by TLR4-MD-2-dependent cell activation, a series of conformationally constrained endotoxin mimetics based on crystal structures of a - a; ß - ß and a - ß trehalose will be synthesised. The trehalose type backbone serves as a scaffold mimicking the spatial arrangement of the carbohydrate backbone of lipid A as seen in the crystal structures of TLR4-MD-2-bound agonistic and antagonistic LPS. For the stereoselective preparation of nonreducing disaccharides the problem of simultaneously controlling the stereochemistry at two anomeric centres while forming a glycosidic linkage will be addressed. Along with conformationally constrained endotoxin mimetics of trehalose type, a number of analogues having the same acylation and phosphorylation pattern but equipped with the flexible C-glycosidic methyloxy linkage will be prepared. This would allow straight comparison of the endotoxic properties of conformationally constrained mimetics vs. flexible analogues mimicking natural lipid A, and, thus, would make possible a direct correlation of hydroxymethyl conformation and relative orientation of GlcN rings, which determines the direction of lipid chains in endotoxically active conformation, to agonistic activity. The project will be carried out within national and international multidisciplinary cooperations. Differential induction of the TLR4-MD-2 MyD88-dependent and -independent signaling pathways by synthetic endotoxin mimetics in relation to chemical structure will be studied in TLR4-MD-2 transfected HEK293 cells and mouse macrophages (cooperations S. Knapp, P. Kovarik). Agonistic lipid A analogues will be further tested for the ability to modulate LPS-induced inflammation as well as induction of LPS tolerance in rodents in vivo (S. Knapp). In- vitro imaging of the TLR4-MD-2-endotoxin complex will be examined by FRET using a set of fluorescently labelled proteins (TLR4, MD-2, MyD88) and azido-functionalized endotoxin mimetics which will be fluorescently labelled in vitro by means of "click chemistry" (cooperation R. Jerala). These data will provide a new insight in the structural determinants of the lipid A endotoxicity and, concurrently, in the mechanisms of LPS - triggered TLR4 activation, which, in turn, will permit improvements in the design of future TLR4-dependent adjuvants and therapeutics.

Lipopolysaccharide (LPS, Endotoxin) is a large 20 kDa molecule situated in the outer membrane of the cell wall of Gram-negative bacteria. LPS represents a pathogen associated molecular pattern (PAMP) that can be detected by the mammalian innate immune system. Immune cells such as macrophages or dendritic cells possess specific receptor proteins (Toll-like Receptors) which are responsible for the recognition of PAMPs and ensuing initiation of the innate immune response. Minor amounts of LPS are detected by the Toll-like Receptor 4 (TLR4) which, after binding of LPS, triggers a cascade of immune reactions resulting in the release of pro-inflammatory mediators (cytokines). The latter contributes to the establishment of an immediate immune response to infection and eradication of the invading pathogens. TLR4 can recognize and bind only a small amphiphilic part of LPS which is called Lipid A and consists of a carbohydrate backbone substituted by the two anionic phosphate groups and by up to six hydrophobic lipid tails. The degree of TLR4 activation depends mainly on the chemical structure of Lipid A. In this project we explored the structure-function relationships in the ternary Lipid AMD-2TLR4 complex wherein we focused on the three-dimensional molecular shape of the protein-bound ligand as the major structural determinant of endotoxicity. We directed our research on restricting the inherent flexibility of the ß(1?6)-linked diglucosamine backbone of Lipid A by exchanging a flexible three-bond ß(1?6)-glycosidic linkage for a rigid two-bond 1,1-anomerically linked trehalose-type connection. Rational X-ray structure based design and chemical synthesis of a series of Lipid A mimetics (LAMs) based on the 1,1-linked disaccharide backbones having variable anomeric configuration afforded both antagonistic (anti-endotoxic) and agonistic (TLR4 stimulating) TLR4 ligands. The immunostimulating activity of LAMs was dependent on the chemical structure (e.g. number of lipid tails and phosphate groups attached to the carbohydrate backbone) and, most importantly, on the topology and three-dimensional arrangement of the sugar backbone. Lipid A mimetics based on the disaccharide scaffold having planar oriented sugar rings displayed antagonistic properties, whereas LAMs based on the disaccharide scaffold with twisted relative arrangement of sugar rings were highly agonistic. Our data contribute to the comprehension of structure activity relationships in the LPS-TLR4 ligand-receptor complex and provide new insights on the structural requirements to TLR4 specific ligands. Additionally, within a cooperation framework with research groups in Germany, Switzerland, Belgium and Slovenia, the immuno-biological examination of novel synthetic TLR4 ligands was accomplished. Therapeutic potential of novel synthetic TLR4 antagonists and agonists was demonstrated in a variety of immune and non-immune cells, highlighting several compounds from antagonistic series as suitable lead structures for the development of antisepsis drug candidates and the compounds of the agonistic series as immuno-modulators and potential vaccine adjuvants, respectively.

Research institution(s)
  • Universität für Bodenkultur Wien - 100%
International project participants
  • Roman Jerala, National Institute of Chemistry - Slovenia

Research Output

  • 366 Citations
  • 20 Publications
Publications
  • 2018
    Title Disaccharide-Based Anionic Amphiphiles as Potent Inhibitors of Lipopolysaccharide-Induced Inflammation
    DOI 10.1002/cmdc.201800505
    Type Journal Article
    Author Borio A
    Journal ChemMedChem
    Pages 2317-2331
  • 2018
    Title Synthetic glycan-based TLR4 agonists targeting caspase-4/11 for the development of adjuvants and immunotherapeutics
    DOI 10.1039/c7sc05323a
    Type Journal Article
    Author Adanitsch F
    Journal Chemical Science
    Pages 3957-3963
    Link Publication
  • 2018
    Title Aminosugar-based immunomodulator lipid A: synthetic approaches
    DOI 10.3762/bjoc.14.3
    Type Journal Article
    Author Zamyatina A
    Journal Beilstein Journal of Organic Chemistry
    Pages 25-53
    Link Publication
  • 2012
    Title Synthesis of 1,1'-alpha, alpha-disaccharides en route to Lipid A mimetics.
    Type Conference Proceeding Abstract
    Author Adanitsch F
    Conference Poster: 26th International Carbohydrate Symposium, Madrid, July 22-27, In: Jimenez-Barbero, J. (Ed.), Book of Abstracts
  • 2012
    Title Synthesis of antagonistic conformationally constrained Lipid A mimetics.
    Type Conference Proceeding Abstract
    Author Oblak A Et Al
    Conference Poster: 26th International Carbohydrate Symposium, Madrid, July 22-27 In: Jimenez-Barbero, J. (Ed.), Book of Abstracts
  • 2014
    Title Synthetic ligands as probes for LPS-protein interactions.
    Type Conference Proceeding Abstract
    Author Kosma P
    Conference Lecture: 6th Baltic Meeting on Microbial carbohydrates, Gdansk, SEPT 7-10, In: University of Gdansk, Book of Abstracts
  • 2014
    Title Anti-endotoxic activity and structural basis for human MD-2·TLR4 antagonism of tetraacylated lipid A mimetics based on ßGlcN(1?1)aGlcN scaffold
    DOI 10.1177/1753425914550426
    Type Journal Article
    Author Garate J
    Journal Innate Immunity
    Pages 490-503
    Link Publication
  • 2013
    Title Conformationally constrained lipid A mimetics for elucidation of TLR4 activation by endotoxin.
    Type Conference Proceeding Abstract
    Author Zamyatina A
    Conference Lecture: ( 2013), 15th International Congress of Immunology, SM 7, Milan, In: Granucci F., Peri, W., Weiss, J., Book of Abstracts
  • 2015
    Title Lipopolysaccharide & Co. - Synthetic endeavour into the realm of innate immunity.
    Type Conference Proceeding Abstract
    Author Zamyatina A
    Conference Keynote lecture: 18th European Carbohydrate Symposium, Moscow, August 2- 7, In: Yuri Knirel (Ed.), Book of Abstracts.
  • 2014
    Title Chemistry of Lipid A: At the Heart of Innate Immunity
    DOI 10.1002/chem.201403923
    Type Journal Article
    Author Molinaro A
    Journal Chemistry – A European Journal
    Pages 500-519
  • 2014
    Title Development of aGlcN(1?1)aMan-Based Lipid A Mimetics as a Novel Class of Potent Toll-like Receptor 4 Agonists
    DOI 10.1021/jm500946r
    Type Journal Article
    Author Adanitsch F
    Journal Journal of Medicinal Chemistry
    Pages 8056-8071
    Link Publication
  • 2015
    Title A Synthesis of Lipid A analogues as prospective anti-inflammatory agents.
    Type Conference Proceeding Abstract
    Author Borio A
    Conference Poster: (2015), 18th European Carbohydrate Symposium, Moscow, August 2- 7, 2015, In: Yuri Knirel (Ed.), Book of Abstracts
  • 2015
    Title Species and mediator specific TLR4 antagonism in primary human and murine immune cells by ßGlcN(1?1)aGlc based lipid A mimetics
    DOI 10.1016/j.molimm.2015.07.037
    Type Journal Article
    Author Chebrolu C
    Journal Molecular Immunology
    Pages 636-641
    Link Publication
  • 2012
    Title Synthesis of a non-reducing disaccharide scaffold for novel lipid A mimetics.
    Type Conference Proceeding Abstract
    Author Adanitsch F
    Conference Lecture: (2012): 4th EuCheMs Chemistrs Congress, Prague, August 26-30, Chem Listy
  • 2012
    Title Synthetic Lipid A mimetics as ligands for modulation of innate and adaptive immunity.
    Type Conference Proceeding Abstract
    Author Hofbauer K Et Al
    Conference Lecture: 26th International Carbohydrate Symposium, Madrid, JULY 22-27, In: Jimenez-Barbero, J. (Ed.), Book of Abstracts
  • 2013
    Title Conformationally Constrained Lipid A Mimetics for Exploration of Structural Basis of TLR4/MD-2 Activation by Lipopolysaccharide
    DOI 10.1021/cb4003199
    Type Journal Article
    Author Artner D
    Journal ACS Chemical Biology
    Pages 2423-2432
    Link Publication
  • 2011
    Title Chemical Synthesis of Lipopolysaccharide Core
    DOI 10.1007/978-3-7091-0733-1_5
    Type Book Chapter
    Author Kosma P
    Publisher Springer Nature
    Pages 131-161
  • 2013
    Title Synthesis of trehalose type lipid A mimetics.
    Type Conference Proceeding Abstract
    Author Adanitsch F
    Conference Poster: (2013), 17th European Carbohydrate Symposium, Tel Aviv, July 7-11, 2013, In: Timor Baasov (Ed.), Book of Abstracts
  • 2013
    Title Novel Lipid A mimetics based on a 1,1'-alpha, alphaDisaccharide scaffold.
    Type Conference Proceeding Abstract
    Author Adanitsch F
    Conference Lecture: 245th American Chemical Society National Meeting, New Orleans, April 7-11, 2013 In: Am. Chem. Soc., Abstracts 245th ACS Meeting
  • 2013
    Title Synthetic glycophospholipids targeting TLR4 mediated immune signaling.
    Type Conference Proceeding Abstract
    Author Hofbauer K Et Al
    Conference Lecture: 17th European Carbohydrate Symposium, Tel Aviv, July 7-11, 2013. In:Timor Baasov (Ed.), Book of Abstracts

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