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Function and Inhibition of Oncogenic Transcription Factors

Function and Inhibition of Oncogenic Transcription Factors

Klaus Bister (ORCID: )
  • Grant DOI 10.55776/P23652
  • Funding program Principal Investigator Projects
  • Status ended
  • Start September 1, 2011
  • End August 31, 2016
  • Funding amount € 316,638
  • Project website

Disciplines

Biology (70%); Medical-Theoretical Sciences, Pharmacy (15%); Medical Biotechnology (15%)

Keywords

    Cellular Proliferation Control, Carcinogenesis, Oncogene, Tumor Suppressor Gene, Transcription Factor, Protein-DNA Interaction

Abstract Final report

The principal goal of our research is to elucidate the molecular mechanisms of cellular proliferation control and carcinogenesis. Specifically, we focus on the analysis of oncogenes and the definition of possible antagonists of oncogene function. The c-myc proto-oncogene encodes a transcription factor (Myc) with oncogenic potential. Myc and its dimerization partner Max are bHLH-Zip DNA binding proteins controlling fundamental cellular processes. Deregulation of c-myc leads to tumorigenesis and is a hallmark of many human cancers. We have recently identified ancestral forms of myc (myc1, myc2) and max genes from the early diploblastic cnidarian Hydra, the most basal metazoan organism employed so far for the analysis of these genes [Hartl et al., PNAS 107:4051-4056 (2010)]. Hydra myc1 is specifically activated in all rapidly proliferating cell types of the interstitial stem cell system. The ancestral Hydra Myc1 and Max proteins share the principal design and biochemical properties with their vertebrate derivatives, and Hydra Myc1 even displays basic oncogenic potential. Our results suggest that the principal functions of the Myc master regulator arose very early in metazoan evolution, allowing their dissection in a simple model organism. We will now also characterize in detail the structure and specific expression of the myc2 gene. Notably, we will analyze the role of these genes in Hydra development and stem cell biology by gene silencing procedures. Furthermore, we will identify and analyze effector genes downstream of Hydra Myc and compare these pathways with those proposed for the role of Myc in growth control or carcinogenesis in higher organisms. We will also extend our analyses to the putative non-transcriptional functions of Myc, e.g. control of DNA replication. Myc-induced cell transformation involves transcriptional activation or suppression of specific target genes. We have recently identified the BASP1 gene as a novel target suppressed by Myc [Hartl et al., PNAS 106:5604-5609 (2009)]. The acidic 25 kDa BASP1 protein was originally isolated as a cytoskeleton-associated protein from rat and chicken brain, but has also been found in other tissues and subcellular locations. BASP1 mRNA and protein expression is specifically suppressed in avian fibroblasts transformed by the v myc oncogene. Ectopic expression of BASP1 renders fibroblasts resistant to subsequent cell transformation by v myc. Mutational analysis showed that the basic N-terminal domain containing a myristoylation site, a calmodulin binding domain, and a putative nuclear localization signal is essential for the inhibitory function of the BASP1 protein. Our results suggest that downregulation of the BASP1 gene is a necessary event in myc-induced oncogenesis and define the BASP1 protein as a potential tumor suppressor. We will now reassess the apparent antagonism of Myc and BASP1 in mammalian systems, including human tumor cells. Furthermore, we will explore the possibility to use BASP1-derived small peptides as putative inhibitors of Myc function and myc-induced tumorigenesis.

Our research is focused on the molecular mechanisms of cellular proliferation control and carcinogenesis. Specifically, we analyze the function of oncogenes and search for possible antagonists and mechanisms for the inhibition of oncogene function. Cell transformation and tumor induction by activated oncogenes (mutated proto-oncogenes) or inactivated tumor suppressor genes involve changes in transcriptional control with subsequent alterations in gene expression patterns. One of the critical transcription factors (Myc) is encoded by a prominent proto-oncogene, c-MYC. Myc and its dimerization partner Max are bHLH-LZ DNA binding proteins controlling fundamental cellular processes. Deregulation of the master regulator c-MYC leads to tumorigenesis and is a hallmark of many human cancers. The specific aims of the project funded by this grant were focused on (i) the definition of basic functions of Myc homologs in very simple metazoan organisms, (ii) the identification of novel Myc transcriptional targets and protein interaction partners, and (iii) the identification of molecules and mechanisms to inhibit Myc function as a strategy towards therapeutic intervention in carcinogenesis. (i) We identified and fully characterized novel homologs of human c-MYC in the simple metazoan Hydra (myc1 and myc2), with different developmental expression patterns and different control by Wnt signaling. Studies of Myc function in very basic organisms may provide further insights into relevant Myc functions in more complex organisms, including man. (ii) We identified genes encoding components of the DNA replication machinery as direct transcriptional targets of Myc, implicating Myc in the transcriptional control of DNA replication. This is of particular interest since previous studies had reported that DNA replication is also under non-transcriptional control by Myc. We also identified the calcium sensor calmodulin as a novel protein-protein interaction partner of Myc, pointing to a possible synergism of Ca2+ and Myc signaling. (iii) In collaborative studies with the Scripps Research Institute in California, we identified and fully characterized small- molecule inhibitors of Myc:Max dimerization that work in the nanomolar range and are currently developed into potential therapeutic agents. In addition to these major project areas, we continued structural analyses of cancer-relevant proteins encoded by Myc transcriptional targets in cooperation with the University of Vienna, and established new methods of transcriptional silencing of cancer-relevant genes in cooperation with colleagues from the University of Innsbruck.

Research institution(s)
  • Universität Innsbruck - 100%
International project participants
  • Ulf R. Rapp, Max-Planck-Gesellschaft - Germany
  • Peter K. Vogt, The Scripps Research Institute - USA

Research Output

  • 884 Citations
  • 30 Publications
Publications
  • 2017
    Title Chapter Three Targeting the Architecture of Deregulated Protein Complexes in Cancer
    DOI 10.1016/bs.apcsb.2017.07.001
    Type Book Chapter
    Author Stefan E
    Publisher Elsevier
    Pages 101-132
  • 2017
    Title MYC and RAF: Key Effectors in Cellular Signaling and Major Drivers in Human Cancer
    DOI 10.1007/82_2017_4
    Type Book Chapter
    Author Stefan E
    Publisher Springer Nature
    Pages 117-151
    Link Publication
  • 2014
    Title Inhibitor of MYC identified in a Kröhnke pyridine library
    DOI 10.1073/pnas.1319488111
    Type Journal Article
    Author Hart J
    Journal Proceedings of the National Academy of Sciences
    Pages 12556-12561
    Link Publication
  • 2014
    Title In vivo quantification and perturbation of Myc-Max interactions and the impact on oncogenic potential
    DOI 10.18632/oncotarget.2588
    Type Journal Article
    Author Raffeiner P
    Journal Oncotarget
    Pages 8869-8878
    Link Publication
  • 2014
    Title Hydra myc2, a unique pre-bilaterian member of the myc gene family, is activated in cell proliferation and gametogenesis
    DOI 10.1242/bio.20147005
    Type Journal Article
    Author Hartl M
    Journal Biology Open
    Pages 397-407
    Link Publication
  • 2017
    Title ß-Catenin acts in a position-independent regeneration response in the simple eumetazoan Hydra
    DOI 10.1016/j.ydbio.2017.09.005
    Type Journal Article
    Author Gufler S
    Journal Developmental Biology
    Pages 310-323
  • 2017
    Title Viruses, Genes, and Cancer - Curr Top Microbiol Immunol, Vol. 407
    Type Book
    Author ---
    editors Hunter E, Bister K
    Publisher Springer International Publishing
    Link Publication
  • 2015
    Title Stopping MYC in its tracks
    DOI 10.18632/aging.100780
    Type Journal Article
    Author Stefan E
    Journal Aging (Albany NY)
    Pages 463-464
    Link Publication
  • 2016
    Title Calcium-dependent binding of Myc to calmodulin
    DOI 10.18632/oncotarget.13759
    Type Journal Article
    Author Raffeiner P
    Journal Oncotarget
    Pages 3327-3343
    Link Publication
  • 2015
    Title Expanding the Scope of 2'-SCF3 Modified RNA
    DOI 10.1002/chem.201500415
    Type Journal Article
    Author Jud L
    Journal Chemistry – A European Journal
    Pages 10400-10407
    Link Publication
  • 2019
    Title Differential regulation of myc homologs by Wnt/ß-Catenin signaling in the early metazoan Hydra
    DOI 10.1111/febs.14812
    Type Journal Article
    Author Hartl M
    Journal The FEBS Journal
    Pages 2295-2310
    Link Publication
  • 2021
    Title MYC Analysis in Cancer and Evolution
    DOI 10.1007/978-1-0716-1476-1_6
    Type Book Chapter
    Author Hartl M
    Publisher Springer Nature
    Pages 87-117
  • 2019
    Title Gully Head-Cut Distribution Modeling Using Machine Learning Methods—A Case Study of N.W. Iran
    DOI 10.3390/w12010016
    Type Journal Article
    Author Arabameri A
    Journal Water
    Pages 16
    Link Publication
  • 2020
    Title The brain acid-soluble protein 1 (BASP1) interferes with the oncogenic capacity of MYC and its binding to calmodulin
    DOI 10.1002/1878-0261.12636
    Type Journal Article
    Author Hartl M
    Journal Molecular Oncology
    Pages 625-644
    Link Publication
  • 2013
    Title Efficient Access to 3'-Terminal Azide-Modified RNA for Inverse Click-Labeling Patterns
    DOI 10.1021/bc400513z
    Type Journal Article
    Author Santner T
    Journal Bioconjugate Chemistry
    Pages 188-195
    Link Publication
  • 2013
    Title Transcriptional control of DNA replication licensing by Myc
    DOI 10.1038/srep03444
    Type Journal Article
    Author Valovka T
    Journal Scientific Reports
    Pages 3444
    Link Publication
  • 2013
    Title Oncogenes
    DOI 10.1016/b978-0-12-374984-0.01089-5
    Type Book Chapter
    Author Hartl M
    Publisher Elsevier
    Pages 164-166
  • 2012
    Title 1H, 13C, and 15N backbone and side chain resonance assignments of the C-terminal DNA binding and dimerization domain of v-Myc
    DOI 10.1007/s12104-012-9437-3
    Type Journal Article
    Author Kizilsavas G
    Journal Biomolecular NMR Assignments
    Pages 321-324
    Link Publication
  • 2012
    Title 2'-Azido RNA, a Versatile Tool for Chemical Biology: Synthesis, X-ray Structure, siRNA Applications, Click Labeling
    DOI 10.1021/cb200510k
    Type Journal Article
    Author Fauster K
    Journal ACS Chemical Biology
    Pages 581-589
    Link Publication
  • 2015
    Title In-vivo detection of binary PKA network interactions upon activation of endogenous GPCRs
    DOI 10.1038/srep11133
    Type Journal Article
    Author Röck R
    Journal Scientific Reports
    Pages 11133
    Link Publication
  • 2015
    Title Discovery of oncogenes: The advent of molecular cancer research
    DOI 10.1073/pnas.1521145112
    Type Journal Article
    Author Bister K
    Journal Proceedings of the National Academy of Sciences
    Pages 15259-15260
    Link Publication
  • 2015
    Title Impact of kinase activating and inactivating patient mutations on binary PKA interactions
    DOI 10.3389/fphar.2015.00170
    Type Journal Article
    Author Röck R
    Journal Frontiers in Pharmacology
    Pages 170
    Link Publication
  • 2011
    Title Electron Detachment Dissociation for Top-Down Mass Spectrometry of Acidic Proteins
    DOI 10.1002/chem.201003709
    Type Journal Article
    Author Ganisl B
    Journal Chemistry – A European Journal
    Pages 4460-4469
    Link Publication
  • 2011
    Title Lipocalin Q83 Reveals a Dual Ligand Binding Mode with Potential Implications for the Functions of Siderocalins
    DOI 10.1021/bi201115q
    Type Journal Article
    Author Coudevylle N
    Journal Biochemistry
    Pages 9192-9199
  • 2011
    Title The Metastasis-Associated Extracellular Matrix Protein Osteopontin Forms Transient Structure in Ligand Interaction Sites
    DOI 10.1021/bi200291e
    Type Journal Article
    Author Platzer G
    Journal Biochemistry
    Pages 6113-6124
  • 2013
    Title Analyzing Myc in Cell Transformation and Evolution
    DOI 10.1007/978-1-62703-429-6_3
    Type Book Chapter
    Author Hartl M
    Publisher Springer Nature
    Pages 21-49
    Link Publication
  • 2013
    Title Reciprocal regulation of PKA and Rac signaling
    DOI 10.1073/pnas.1215902110
    Type Journal Article
    Author Bachmann V
    Journal Proceedings of the National Academy of Sciences
    Pages 8531-8536
    Link Publication
  • 2013
    Title MC29 Avian Myelocytomatosis Virus
    DOI 10.1016/b978-0-12-374984-0.00913-x
    Type Book Chapter
    Author Bister K
    Publisher Elsevier
    Pages 330-332
  • 2013
    Title Interplay of PKA and Rac
    DOI 10.4161/sgtp.27281
    Type Journal Article
    Author Bachmann V
    Journal Small GTPases
    Pages 247-251
    Link Publication
  • 2010
    Title Chemical Synthesis of Site-Specifically 2'-Azido-Modified RNA and Potential Applications for Bioconjugation and RNA Interference
    DOI 10.1002/cbic.201000646
    Type Journal Article
    Author Aigner M
    Journal ChemBioChem
    Pages 47-51
    Link Publication

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