BIOADHESION MEETS FUNCTIONAL GENOMICS IN FLATWORMS
BIOADHESION MEETS FUNCTIONAL GENOMICS IN FLATWORMS
Disciplines
Biology (85%); Physics, Astronomy (15%)
Keywords
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Duo Gland System,
Flatworms,
Adhesion,
Biological adhesives,
Bio-Inspired Adhesives
Adhesives are today employed in many areas of industry and medicine. Medical adhesives are mainly used for implants, tissue bonding, dentistry, and wound closure. These adhesives are not biocompatible and they can release cytotoxic substances into the body to cause dermatological, allergic and respiratory problems. Therefore, biocompatibility is one critical challenge for novel medical adhesives. Novel biomimetic adhesives based on natural glues of plants or animals can lead to the development of long-sought novel medical adhesives that have improved biocompatibility. However, most organisms that exhibit adhesive features usually produce little amounts of the adhesive substance. This limited availability often impedes identifications and biochemical analyses. In addition, these organisms are non-model systems that are not amenable for a powerful functional genomic approach. In the present project we aim identifying novel molecules that are involved in biological adhesion and release in the flatworm Macrostomum lignano. M. lignano harbors several features that render this species as particularly well suited to study biological adhesion including the very rapid adhesion-release mechanism, the state- of-the-art methodological toolbox, and the excellent knowledge of the morphology of the tail plate, which harbours the duo-gland adhesive system. In this project we will gradually narrow down the number of candidate genes that are involved in M. lignano adhesion and release. First, we will generate a highly tail-plate specific transcriptome database followed by a whole mount in situ hybridization screen of all tail specific genes. Next, knock-down of selected candidate genes will be performed using RNA interference which will result in a non-adhesive or non-release phenotype. Those phenotypes will then be analyzed by semi-thin sectioning- and ultrastructural analyses. This will allow selecting candidate genes to generate polyclonal antibodies. The antibodies will be used to pull-down the adhesive and release proteins which will then be analyzed by Mass Spectrometry to obtain an overview on post-translational protein modifications which are known to play important roles in adhesion. The carbohydrate components involved in adhesion or release vesicles will additionally be studied using lectin staining. In a proof of concept we have already screened 50 genes and were able to show that the proposed tools and methods can indeed be used to identify genes involved in M. lignano adhesion. We have already identified a non- adhesive phenotype by RNAi affecting a tail-plate specific intermediate filament gene, providing evidence for the suitability of the proposed approach. With the suggested functional genomics approach the project is at the forefront of the exciting research area of biological adhesion. In summary, we take advantage of the biology of the animals combined with the available methods for M. lignano to lay the basis for a future development of a novel glue-detachment system based on the M. lignano adhesion-release mechanism.
Man-made adhesives contain hazardous components which are toxic and cause skin irritations, respiratory problems or they are suspected carcinogens. Furthermore, these adhesives perform poorly in wet environments. In contrast, biological adhesives produced by animals can be considered as non-toxic, tissue compatible, and they are able to function under wet conditions. However, little is known about the mechanisms underlying biological adhesives. The free-living flatworm Macrostomum lignano can attach and release several times within a second on any substrate in seawater. It was the goal of this project to analyze the adhesion mechanism and the components involved in Macrostomum attachment and release. We have performed a detailed analysis of the Macrostomum duo-gland system which consists of an adhesive-, and a releasing gland cell, and the anchor cell. We have identified adhesive proteins using transcriptomics, differential gene expression, Mass Spectrometry, In situ Hybridization screening, Lectin staining and pull-down, specific antibodies, and light- and electron microscopy. We now have identified two key adhesive proteins which result in a non-adhesive phenotype upon RNAi knock-down. We aim for understanding the fundamental mechanisms that mediate adhesion and release in Macrotomum with the goal to generate a flatworm-derived biomimetic glue that can be applied in biomedicine and industry.
- Herbert Lindner, Medizinische Universität Innsbruck , associated research partner
- Patrick Flammang, Université de Mons - Belgium
- Eugene Berezikov, European Research Institute for the Biology of Ageing - Netherlands
- Lukas Schärer, Universität Basel - Switzerland
Research Output
- 877 Citations
- 20 Publications
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2018
Title A targeted in situ hybridization screen identifies putative seminal fluid proteins in a simultaneously hermaphroditic flatworm DOI 10.1186/s12862-018-1187-0 Type Journal Article Author Weber M Journal BMC Evolutionary Biology Pages 81 Link Publication -
2016
Title Profiling of adhesive-related genes in the freshwater cnidarian Hydra magnipapillata by transcriptomics and proteomics DOI 10.1080/08927014.2016.1233325 Type Journal Article Author Rodrigues M Journal Biofouling Pages 1115-1129 Link Publication -
2016
Title Salinity stress from the perspective of the energy-redox axis: Lessons from a marine intertidal flatworm DOI 10.1016/j.redox.2016.09.012 Type Journal Article Author Rivera-Ingraham G Journal Redox Biology Pages 53-64 Link Publication -
2016
Title Adhesive organ regeneration in Macrostomum lignano DOI 10.1186/s12861-016-0121-1 Type Journal Article Author Lengerer B Journal BMC Developmental Biology Pages 20 Link Publication -
2015
Title Experimental strategies for the identification and characterization of adhesive proteins in animals: a review DOI 10.1098/rsfs.2014.0064 Type Journal Article Author Hennebert E Journal Interface Focus Pages 20140064 Link Publication -
2017
Title Efficient transgenesis and annotated genome sequence of the regenerative flatworm model Macrostomum lignano DOI 10.1038/s41467-017-02214-8 Type Journal Article Author Wudarski J Journal Nature Communications Pages 2120 Link Publication -
2017
Title A platform for efficient transgenesis in Macrostomum lignano, a flatworm model organism for stem cell research DOI 10.1101/151654 Type Preprint Author Wudarski J Pages 151654 Link Publication -
2017
Title Mechanical adaptability of sea cucumber Cuvierian tubules involves a mutable collagenous tissue DOI 10.1242/jeb.145706 Type Journal Article Author Demeuldre M Journal Journal of Experimental Biology Pages 2108-2119 Link Publication -
2017
Title Organ specific gene expression in the regenerating tail of Macrostomum lignano DOI 10.1016/j.ydbio.2017.07.021 Type Journal Article Author Lengerer B Journal Developmental Biology Pages 448-460 Link Publication -
2018
Title Papillae revisited and the nature of the adhesive secreting collocytes DOI 10.1016/j.ydbio.2018.11.012 Type Journal Article Author Zeng F Journal Developmental Biology Pages 183-198 Link Publication -
2020
Title Integrative Transcriptome and Proteome Analysis of the Tube Foot and Adhesive Secretions of the Sea Urchin Paracentrotus lividus DOI 10.3390/ijms21030946 Type Journal Article Author Pjeta R Journal International Journal of Molecular Sciences Pages 946 Link Publication -
2019
Title Sex allocation plasticity on a transcriptome scale: Socially sensitive gene expression in a simultaneous hermaphrodite DOI 10.1111/mec.15077 Type Journal Article Author Ramm S Journal Molecular Ecology Pages 2321-2341 Link Publication -
2019
Title A mechanism for temporary bioadhesion DOI 10.1073/pnas.1814230116 Type Journal Article Author Wunderer J Journal Proceedings of the National Academy of Sciences Pages 4297-4306 Link Publication -
2014
Title Sea star tenacity mediated by a protein that fragments, then aggregates DOI 10.1073/pnas.1400089111 Type Journal Article Author Hennebert E Journal Proceedings of the National Academy of Sciences Pages 6317-6322 Link Publication -
2014
Title Biological adhesion of the flatworm Macrostomum lignano relies on a duo-gland system and is mediated by a cell type-specific intermediate filament protein DOI 10.1186/1742-9994-11-12 Type Journal Article Author Lengerer B Journal Frontiers in Zoology Pages 12 Link Publication -
2016
Title The cellular basis of bioadhesion of the freshwater polyp Hydra DOI 10.1186/s40850-016-0005-7 Type Journal Article Author Rodrigues M Journal BMC Zoology Pages 3 Link Publication -
2015
Title An integrated transcriptomic and proteomic analysis of sea star epidermal secretions identifies proteins involved in defense and adhesion DOI 10.1016/j.jprot.2015.07.002 Type Journal Article Author Hennebert E Journal Journal of Proteomics Pages 83-91 Link Publication -
2015
Title Positional RNA-Seq identifies candidate genes for phenotypic engineering of sexual traits DOI 10.1186/s12983-015-0106-0 Type Journal Article Author Arbore R Journal Frontiers in Zoology Pages 14 Link Publication -
2015
Title Genome and transcriptome of the regeneration-competent flatworm, Macrostomum lignano DOI 10.1073/pnas.1516718112 Type Journal Article Author Wasik K Journal Proceedings of the National Academy of Sciences Pages 12462-12467 Link Publication -
2014
Title Molecular biology approaches in bioadhesion research DOI 10.3762/bjnano.5.112 Type Journal Article Author Rodrigues M Journal Beilstein Journal of Nanotechnology Pages 983-993 Link Publication