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BIOADHESION MEETS FUNCTIONAL GENOMICS IN FLATWORMS

BIOADHESION MEETS FUNCTIONAL GENOMICS IN FLATWORMS

Peter Ladurner (ORCID: 0000-0002-0323-9266)
  • Grant DOI 10.55776/P25404
  • Funding program Principal Investigator Projects
  • Status ended
  • Start February 1, 2013
  • End November 30, 2017
  • Funding amount € 330,857
  • Project website

Disciplines

Biology (85%); Physics, Astronomy (15%)

Keywords

    Duo Gland System, Flatworms, Adhesion, Biological adhesives, Bio-Inspired Adhesives

Abstract Final report

Adhesives are today employed in many areas of industry and medicine. Medical adhesives are mainly used for implants, tissue bonding, dentistry, and wound closure. These adhesives are not biocompatible and they can release cytotoxic substances into the body to cause dermatological, allergic and respiratory problems. Therefore, biocompatibility is one critical challenge for novel medical adhesives. Novel biomimetic adhesives based on natural glues of plants or animals can lead to the development of long-sought novel medical adhesives that have improved biocompatibility. However, most organisms that exhibit adhesive features usually produce little amounts of the adhesive substance. This limited availability often impedes identifications and biochemical analyses. In addition, these organisms are non-model systems that are not amenable for a powerful functional genomic approach. In the present project we aim identifying novel molecules that are involved in biological adhesion and release in the flatworm Macrostomum lignano. M. lignano harbors several features that render this species as particularly well suited to study biological adhesion including the very rapid adhesion-release mechanism, the state- of-the-art methodological toolbox, and the excellent knowledge of the morphology of the tail plate, which harbours the duo-gland adhesive system. In this project we will gradually narrow down the number of candidate genes that are involved in M. lignano adhesion and release. First, we will generate a highly tail-plate specific transcriptome database followed by a whole mount in situ hybridization screen of all tail specific genes. Next, knock-down of selected candidate genes will be performed using RNA interference which will result in a non-adhesive or non-release phenotype. Those phenotypes will then be analyzed by semi-thin sectioning- and ultrastructural analyses. This will allow selecting candidate genes to generate polyclonal antibodies. The antibodies will be used to pull-down the adhesive and release proteins which will then be analyzed by Mass Spectrometry to obtain an overview on post-translational protein modifications which are known to play important roles in adhesion. The carbohydrate components involved in adhesion or release vesicles will additionally be studied using lectin staining. In a proof of concept we have already screened 50 genes and were able to show that the proposed tools and methods can indeed be used to identify genes involved in M. lignano adhesion. We have already identified a non- adhesive phenotype by RNAi affecting a tail-plate specific intermediate filament gene, providing evidence for the suitability of the proposed approach. With the suggested functional genomics approach the project is at the forefront of the exciting research area of biological adhesion. In summary, we take advantage of the biology of the animals combined with the available methods for M. lignano to lay the basis for a future development of a novel glue-detachment system based on the M. lignano adhesion-release mechanism.

Man-made adhesives contain hazardous components which are toxic and cause skin irritations, respiratory problems or they are suspected carcinogens. Furthermore, these adhesives perform poorly in wet environments. In contrast, biological adhesives produced by animals can be considered as non-toxic, tissue compatible, and they are able to function under wet conditions. However, little is known about the mechanisms underlying biological adhesives. The free-living flatworm Macrostomum lignano can attach and release several times within a second on any substrate in seawater. It was the goal of this project to analyze the adhesion mechanism and the components involved in Macrostomum attachment and release. We have performed a detailed analysis of the Macrostomum duo-gland system which consists of an adhesive-, and a releasing gland cell, and the anchor cell. We have identified adhesive proteins using transcriptomics, differential gene expression, Mass Spectrometry, In situ Hybridization screening, Lectin staining and pull-down, specific antibodies, and light- and electron microscopy. We now have identified two key adhesive proteins which result in a non-adhesive phenotype upon RNAi knock-down. We aim for understanding the fundamental mechanisms that mediate adhesion and release in Macrotomum with the goal to generate a flatworm-derived biomimetic glue that can be applied in biomedicine and industry.

Research institution(s)
  • Universität Innsbruck - 95%
  • Medizinische Universität Innsbruck - 5%
Project participants
  • Herbert Lindner, Medizinische Universität Innsbruck , associated research partner
International project participants
  • Patrick Flammang, Université de Mons - Belgium
  • Eugene Berezikov, European Research Institute for the Biology of Ageing - Netherlands
  • Lukas Schärer, Universität Basel - Switzerland

Research Output

  • 877 Citations
  • 20 Publications
Publications
  • 2018
    Title A targeted in situ hybridization screen identifies putative seminal fluid proteins in a simultaneously hermaphroditic flatworm
    DOI 10.1186/s12862-018-1187-0
    Type Journal Article
    Author Weber M
    Journal BMC Evolutionary Biology
    Pages 81
    Link Publication
  • 2016
    Title Profiling of adhesive-related genes in the freshwater cnidarian Hydra magnipapillata by transcriptomics and proteomics
    DOI 10.1080/08927014.2016.1233325
    Type Journal Article
    Author Rodrigues M
    Journal Biofouling
    Pages 1115-1129
    Link Publication
  • 2016
    Title Salinity stress from the perspective of the energy-redox axis: Lessons from a marine intertidal flatworm
    DOI 10.1016/j.redox.2016.09.012
    Type Journal Article
    Author Rivera-Ingraham G
    Journal Redox Biology
    Pages 53-64
    Link Publication
  • 2016
    Title Adhesive organ regeneration in Macrostomum lignano
    DOI 10.1186/s12861-016-0121-1
    Type Journal Article
    Author Lengerer B
    Journal BMC Developmental Biology
    Pages 20
    Link Publication
  • 2015
    Title Experimental strategies for the identification and characterization of adhesive proteins in animals: a review
    DOI 10.1098/rsfs.2014.0064
    Type Journal Article
    Author Hennebert E
    Journal Interface Focus
    Pages 20140064
    Link Publication
  • 2017
    Title Efficient transgenesis and annotated genome sequence of the regenerative flatworm model Macrostomum lignano
    DOI 10.1038/s41467-017-02214-8
    Type Journal Article
    Author Wudarski J
    Journal Nature Communications
    Pages 2120
    Link Publication
  • 2017
    Title A platform for efficient transgenesis in Macrostomum lignano, a flatworm model organism for stem cell research
    DOI 10.1101/151654
    Type Preprint
    Author Wudarski J
    Pages 151654
    Link Publication
  • 2017
    Title Mechanical adaptability of sea cucumber Cuvierian tubules involves a mutable collagenous tissue
    DOI 10.1242/jeb.145706
    Type Journal Article
    Author Demeuldre M
    Journal Journal of Experimental Biology
    Pages 2108-2119
    Link Publication
  • 2017
    Title Organ specific gene expression in the regenerating tail of Macrostomum lignano
    DOI 10.1016/j.ydbio.2017.07.021
    Type Journal Article
    Author Lengerer B
    Journal Developmental Biology
    Pages 448-460
    Link Publication
  • 2018
    Title Papillae revisited and the nature of the adhesive secreting collocytes
    DOI 10.1016/j.ydbio.2018.11.012
    Type Journal Article
    Author Zeng F
    Journal Developmental Biology
    Pages 183-198
    Link Publication
  • 2020
    Title Integrative Transcriptome and Proteome Analysis of the Tube Foot and Adhesive Secretions of the Sea Urchin Paracentrotus lividus
    DOI 10.3390/ijms21030946
    Type Journal Article
    Author Pjeta R
    Journal International Journal of Molecular Sciences
    Pages 946
    Link Publication
  • 2019
    Title Sex allocation plasticity on a transcriptome scale: Socially sensitive gene expression in a simultaneous hermaphrodite
    DOI 10.1111/mec.15077
    Type Journal Article
    Author Ramm S
    Journal Molecular Ecology
    Pages 2321-2341
    Link Publication
  • 2019
    Title A mechanism for temporary bioadhesion
    DOI 10.1073/pnas.1814230116
    Type Journal Article
    Author Wunderer J
    Journal Proceedings of the National Academy of Sciences
    Pages 4297-4306
    Link Publication
  • 2014
    Title Sea star tenacity mediated by a protein that fragments, then aggregates
    DOI 10.1073/pnas.1400089111
    Type Journal Article
    Author Hennebert E
    Journal Proceedings of the National Academy of Sciences
    Pages 6317-6322
    Link Publication
  • 2014
    Title Biological adhesion of the flatworm Macrostomum lignano relies on a duo-gland system and is mediated by a cell type-specific intermediate filament protein
    DOI 10.1186/1742-9994-11-12
    Type Journal Article
    Author Lengerer B
    Journal Frontiers in Zoology
    Pages 12
    Link Publication
  • 2016
    Title The cellular basis of bioadhesion of the freshwater polyp Hydra
    DOI 10.1186/s40850-016-0005-7
    Type Journal Article
    Author Rodrigues M
    Journal BMC Zoology
    Pages 3
    Link Publication
  • 2015
    Title An integrated transcriptomic and proteomic analysis of sea star epidermal secretions identifies proteins involved in defense and adhesion
    DOI 10.1016/j.jprot.2015.07.002
    Type Journal Article
    Author Hennebert E
    Journal Journal of Proteomics
    Pages 83-91
    Link Publication
  • 2015
    Title Positional RNA-Seq identifies candidate genes for phenotypic engineering of sexual traits
    DOI 10.1186/s12983-015-0106-0
    Type Journal Article
    Author Arbore R
    Journal Frontiers in Zoology
    Pages 14
    Link Publication
  • 2015
    Title Genome and transcriptome of the regeneration-competent flatworm, Macrostomum lignano
    DOI 10.1073/pnas.1516718112
    Type Journal Article
    Author Wasik K
    Journal Proceedings of the National Academy of Sciences
    Pages 12462-12467
    Link Publication
  • 2014
    Title Molecular biology approaches in bioadhesion research
    DOI 10.3762/bjnano.5.112
    Type Journal Article
    Author Rodrigues M
    Journal Beilstein Journal of Nanotechnology
    Pages 983-993
    Link Publication

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