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Preclinical imaging of the rodent eye with multi-functional optical coherence tomography

Preclinical imaging of the rodent eye with multi-functional optical coherence tomography

Bernhard Baumann (ORCID: 0000-0001-6419-1932)
  • Grant DOI 10.55776/P25823
  • Funding program Principal Investigator Projects
  • Status ended
  • Start July 1, 2013
  • End May 31, 2018
  • Funding amount € 347,067

Disciplines

Biology (20%); Clinical Medicine (60%); Physics, Astronomy (20%)

Keywords

    Optical Coherence Tomography, Polarization-Sensitive Devices, Rodent Model, Retina, Age-Related Macular Degeneration, Glaucoma

Abstract Final report

Major causes of blindness are still not entirely understood which complicates early diagnosis and hinders the development of proper treatment. In order to understand the pathogenesis of vision threatening diseases such as age-related macular degeneration (AMD) or glaucoma, a variety of small animal models have been developed. The gold standard for such preclinical investigations is histology which provides microscopic images of anatomic details and tissue microstructure. However, animals have to be killed in order to perform histology. Hence, there is a great demand for non-invasive imaging methods in order to enable the measurement of anatomical and physiological parameters in vivo and in situ, to reduce the number of animals required, and to enable longitudinal studies in the same animal. It is the aim of this project to develop multi-functional optical coherence tomography (OCT) as a non-invasive alternative to histology in preclinical research in rodent models. OCT is an emerging optical technology which performs high-resolution, cross-sectional and three-dimensional (3D) imaging of tissue morphology in situ and in real time. OCT has become a clinical standard in human ophthalmology and was recently demonstrated as a feasible tool for imaging the rodent retina. Functional OCT methods such as polarization sensitive (PS) OCT and Doppler OCT provide additional information about tissue structure (polarization properties) and function (blood flow) that is inaccessible with standard OCT technology images based solely on the intensity of backscattered light. The additional contrast provided by functional OCT methods extends and improves image contrast and enables quantitative measurements. In this project, a novel multi-functional OCT system will be developed and optimized for both PS- and Doppler OCT imaging in a single system in the mouse and rat eye. Using this system, the following properties and parameters of healthy rodent eyes will be investigated in order to set the base for investigations in disease models: Quantitative mapping of melanin pigmentation based on depolarization of light Measurement of retinal nerve fiber layer birefringence Measurement of scleral fiber orientation and birefringence Mapping retinal vasculature and blood flow measurement For validation, the results will be correlated with state-of-the-art confocal, two photon and electron microscopy of histological sections of the same structures. Finally, relevant rodent models in AMD and glaucoma research will be investigated with the multi-functional OCT system in order to study the pathogeneses and to identify early disease markers. Quantitative functional imaging will provide access to a set of anatomical and physiological parameters that cannot be accessed using any other previously reported techniques. Furthermore, since future biomedical research based on OCT supports the principle of the "Three R`s," to Replace, Reduce and Refine the use of animals for scientific purposes.

In this project, a novel prototype for optical imaging in rodent eyes was developed and employed in several preclinical studies of small animal models for ocular diseases. The prototype provides non-invasive in-vivo micrometer-scale imaging of the rodent retina at rapid acquisition rates and with multi-functional contrast. In addition to morphological imaging based on the reflectivity of different tissues, our prototype simultaneously also reveals tissue polarization properties and 3D angiography of microvasculature. This threefold contrast was exploited to perform quantitative imaging including retinal layer thickness mapping, localized measurements of melanin pigmentation density and perfusion mapping. After specification measurements and imaging experiments in healthy rodents, we employed the prototype for several short-term and longitudinal studies in disease models of ocular pathology. We showed that both structural and functional changes can be monitored and measured in vivo when the intraocular pressure is changed. Important aspects of age-related macular degeneration (AMD) such as the development of abnormal retinal vessels and subtle changes of outer retinal structures were detected and quantitatively assessed in longitudinal studies of two mouse models. The results from the high-resolution imaging studies were correlated with gold standard histological work-up. However, unlike histology, which requires that animals be killed, our optical imaging approach can be performed repeatedly at the exact same eye location as animals age and therefore enables in-vivo and in-situ investigations of lesion development over time. Therefore, the methodology developed in this project not only supports the Three Rs to replace, reduce and refine but also represents a powerful technology for longitudinal studies of rodent models focusing on improved diagnostics and treatment of major causes of blindness affecting millions of humans worldwide.

Research institution(s)
  • Medizinische Universität Wien - 95%
  • Veterinärmedizinische Universität Wien - 5%
Project participants
  • Martin Glösmann, Veterinärmedizinische Universität Wien , associated research partner

Research Output

  • 764 Citations
  • 35 Publications
Publications
  • 2019
    Title Polarization-sensitive imaging with simultaneous bright- and dark-field optical coherence tomography.
    DOI 10.1364/ol.44.004040
    Type Journal Article
    Author Eugui P
    Journal Optics letters
    Pages 4040-4043
    Link Publication
  • 2022
    Title Pulsatile tissue deformation dynamics of the murine retina and choroid mapped by 4D optical coherence tomography
    DOI 10.1364/boe.445093
    Type Journal Article
    Author Baumann B
    Journal Biomedical Optics Express
    Pages 647-661
    Link Publication
  • 2016
    Title Polarization properties of single layers in the posterior eyes of mice and rats investigated using high resolution polarization sensitive optical coherence tomography
    DOI 10.1364/boe.7.001479
    Type Journal Article
    Author Fialová S
    Journal Biomedical Optics Express
    Pages 1479-1495
    Link Publication
  • 2015
    Title Melanin Pigmentation in Rat Eyes: In Vivo Imaging by Polarization-Sensitive Optical Coherence Tomography and Comparison to HistologyMelanin Pigmentation in Rat Eyes
    DOI 10.1167/iovs.15-17742
    Type Journal Article
    Author Baumann B
    Journal Investigative Ophthalmology & Visual Science
    Pages 7462-7472
  • 2015
    Title High-resolution polarization sensitive OCT for ocular imaging in rodents
    DOI 10.1117/12.2081229
    Type Conference Proceeding Abstract
    Author Fialová S
  • 2015
    Title In Vivo Imaging of Retinal and Choroidal Vasculature in the Rodent Eye using Optical Coherence Tomography
    DOI 10.1364/ecbo.2015.95410o
    Type Conference Proceeding Abstract
    Author Augustin M
  • 2017
    Title Spectroscopic imaging with spectral domain visible light optical coherence microscopy in Alzheimer’s disease brain samples
    DOI 10.1364/boe.8.004007
    Type Journal Article
    Author Woehrer A
    Journal Biomedical Optics Express
    Pages 4007-4025
    Link Publication
  • 2017
    Title Ocular fundus pulsations within the posterior rat eye: Chorioscleral motion and response to elevated intraocular pressure
    DOI 10.1038/s41598-017-09310-1
    Type Journal Article
    Author Augustin M
    Journal Scientific Reports
    Pages 8780
    Link Publication
  • 2017
    Title Strategic Talk in Film
    DOI 10.1080/01969722.2017.1407282
    Type Journal Article
    Author Payr S
    Journal Cybernetics and Systems
    Pages 576-596
    Link Publication
  • 2017
    Title Multimode fiber for angle-resolved optical coherence tomography
    DOI 10.1364/boda.2017.bom4a.3
    Type Conference Proceeding Abstract
    Author Eugui P
  • 2017
    Title Visible light spectral domain optical coherence microscopy system for ex vivo brain imaging
    DOI 10.1364/boda.2017.jtu4a.16
    Type Conference Proceeding Abstract
    Author Lichtenegger A
  • 2017
    Title Polarization-sensitive optical coherence microscopy of human brain samples
    DOI 10.1364/brain.2017.brw4b.3
    Type Conference Proceeding Abstract
    Author Baumann B
  • 2017
    Title Visualization of neuritic plaques in Alzheimer’s disease by polarization-sensitive optical coherence microscopy
    DOI 10.1038/srep43477
    Type Journal Article
    Author Baumann B
    Journal Scientific Reports
    Pages 43477
    Link Publication
  • 2017
    Title Polarization Sensitive Optical Coherence Tomography: A Review of Technology and Applications
    DOI 10.3390/app7050474
    Type Journal Article
    Author Baumann B
    Journal Applied Sciences
    Pages 474
    Link Publication
  • 2016
    Title Posterior rat eye during acute intraocular pressure elevation studied using polarization sensitive optical coherence tomography
    DOI 10.1364/boe.8.000298
    Type Journal Article
    Author Fialová S
    Journal Biomedical Optics Express
    Pages 298-314
    Link Publication
  • 2018
    Title Beyond backscattering: optical neuroimaging by BRAD
    DOI 10.1364/boe.9.002476
    Type Journal Article
    Author Eugui P
    Journal Biomedical Optics Express
    Pages 2476-2494
    Link Publication
  • 2020
    Title Optical Coherence Tomography Findings in the Retinas of SOD1 Knockout Mice
    DOI 10.1167/tvst.9.4.15
    Type Journal Article
    Author Augustin M
    Journal Translational Vision Science & Technology
    Pages 15-15
    Link Publication
  • 2020
    Title Indocyanine green provides absorption and spectral contrast for optical coherence tomography at 840??nm in vivo.
    DOI 10.1364/ol.380051
    Type Journal Article
    Author Merkle C
    Journal Optics letters
    Pages 2359-2362
    Link Publication
  • 2022
    Title Degeneration of Melanin-Containing Structures Observed Longitudinally in the Eyes of SOD1-/- Mice Using Intensity, Polarization, and Spectroscopic OCT
    DOI 10.1167/tvst.11.10.28
    Type Journal Article
    Author Merkle C
    Journal Translational Vision Science & Technology
    Pages 28
    Link Publication
  • 2019
    Title The impact of powerful authorities and trustful taxpayers: evidence for the extended slippery slope framework from Austria, Finland, and Hungary
    DOI 10.1080/01442872.2019.1577375
    Type Journal Article
    Author Gangl K
    Journal Policy Studies
    Pages 98-111
    Link Publication
  • 2019
    Title Signal averaging improves signal-to-noise in OCT images: But which approach works best, and when?
    DOI 10.1364/boe.10.005755
    Type Journal Article
    Author Baumann B
    Journal Biomedical Optics Express
    Pages 5755-5775
    Link Publication
  • 2019
    Title Hyperspectral optical coherence tomography for in vivo visualization of melanin in the retinal pigment epithelium
    DOI 10.1002/jbio.201900153
    Type Journal Article
    Author Harper D
    Journal Journal of Biophotonics
    Link Publication
  • 2014
    Title Spectral degree of polarization uniformity for polarization-sensitive OCT
    DOI 10.1080/09500340.2014.945501
    Type Journal Article
    Author Baumann B
    Journal Journal of Modern Optics
    Pages 1758-1763
    Link Publication
  • 2014
    Title Peripapillary Rat Sclera Investigated In Vivo With Polarization-Sensitive Optical Coherence TomographyPS-OCT Investigation of Peripapillary Rat Sclera
    DOI 10.1167/iovs.14-15037
    Type Journal Article
    Author Baumann B
    Journal Investigative Ophthalmology & Visual Science
    Pages 7686-7696
  • 2016
    Title Multi-Functional OCT Enables Longitudinal Study of Retinal Changes in a VLDLR Knockout Mouse Model
    DOI 10.1371/journal.pone.0164419
    Type Journal Article
    Author Augustin M
    Journal PLOS ONE
    Link Publication
  • 2016
    Title Multi-Functional OCT Image Processing for Rodent Eyes
    DOI 10.1364/ots.2016.oth4c.2
    Type Conference Proceeding Abstract
    Author Augustin M
  • 2018
    Title In Vivo Characterization of Spontaneous Retinal Neovascularization in the Mouse Eye by Multifunctional Optical Coherence Tomography
    DOI 10.1167/iovs.17-23208
    Type Journal Article
    Author Augustin M
    Journal Investigative Ophthalmology & Visual Science
    Pages 2054-2068
    Link Publication
  • 2018
    Title White light polarization sensitive optical coherence tomography for sub-micron axial resolution and spectroscopic contrast in the murine retina
    DOI 10.1364/boe.9.002115
    Type Journal Article
    Author Harper D
    Journal Biomedical Optics Express
    Pages 2115-2129
    Link Publication
  • 2018
    Title Optical Coherence Tomography for Brain Imaging
    DOI 10.1007/978-981-10-9020-2_2
    Type Book Chapter
    Author Baumann B
    Publisher Springer Nature
    Pages 49-68
  • 2018
    Title Multimodal Optical Medical Imaging Concepts Based on Optical Coherence Tomography
    DOI 10.3389/fphy.2018.00114
    Type Journal Article
    Author Leitgeb R
    Journal Frontiers in Physics
    Pages 114
    Link Publication
  • 2018
    Title Polarization-sensitive optical coherence tomography imaging of the anterior mouse eye
    DOI 10.1117/1.jbo.23.8.086005
    Type Journal Article
    Author Baumann B
    Journal Journal of Biomedical Optics
    Pages 086005-086005
    Link Publication
  • 2018
    Title Segmentation of Retinal Layers in OCT Images of the Mouse Eye Utilizing Polarization Contrast
    DOI 10.1007/978-3-030-00949-6_37
    Type Book Chapter
    Author Augustin M
    Publisher Springer Nature
    Pages 310-318
  • 2018
    Title Simultaneous Bright and Dark Field Optical Coherence Tomography Using Few-Mode Fiber Detection for Neuropathology Imaging
    DOI 10.1364/ots.2018.oth2d.3
    Type Conference Proceeding Abstract
    Author Eugui P
  • 2018
    Title Polarization-sensitive optical coherence tomography in the anterior mouse eye (Conference Presentation)
    DOI 10.1117/12.2287334
    Type Conference Proceeding Abstract
    Author Baumann B
    Pages 7
  • 2020
    Title Retinal analysis of a mouse model of Alzheimer’s disease with multicontrast optical coherence tomography
    DOI 10.1117/1.nph.7.1.015006
    Type Journal Article
    Author Harper D
    Journal Neurophotonics
    Pages 015006-015006
    Link Publication

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