Wolbachia infection dynamics in evolving Drosophila populations
Wolbachia infection dynamics in evolving Drosophila populations
Disciplines
Biology (100%)
Keywords
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Wolbachia,
Experimental Evolution,
Fitness,
Drosophila
The infection dynamics of endosymbiont Wolbachia is complex, resulting substantial differences between populations, seasons as well as between strains. The causes of these heterogeneities are not yet understood, partly due to the complexity of natural environments. Preparatory work showed that experimental evolution of a Portuguese D. melanogaster population uncovered environment-specific fitness differences among Wolbachia strains. Based on these results, this proposal aims to characterize the dynamics of Wolbachia infection in different environments. Using whole genome sequencing in combination with SNP genotyping the trajectories of different Wolbachia strains will be followed and their relative fitness will be determined. To shed light on the habitat-specific dynamics, a range of Wolbachia strains will be tested for different fitness parameters in a common genetic background. It is anticipated that the results obtained during this project will have profound impact on the understanding of Wolbachia dynamics in natural populations.
Wolbachia is an intracellular bacterium with a broad range of consequences on its host. In this project, we studied the influence of C virus infection on Wolbachia dynamics in Drosophila melanogaster. Our analyses confirmed that Wolbachia protects its host against Drosophila C virus infection. Of particular relevance to this project was the observation that the degree of protection differs between Wolbachia strains. The same Wolbachia strain that increased during cold temperature treatment also increased during C virus exposure. In combination with the long-term dynamics of Wolbachia in hot environments, where the same Wolbachia strain from clade V increased in frequency during later generations we needed to reconsider the interpretation that the spread of the Wolbachia strain is a direct effect of temperature. Rather, we propose that these dynamics are best explained by different C virus load in the hot and cold environments. Interestingly, we could also show that the Drosophila host can develop similar C virus resistance levels in the absence of Wolbachia as the one observed in Wolbachia infected flies.
- Luis Teixeira, Instituto Gulbenkian de Ciencia - Portugal
- Michael Turelli, University of California at Davis - USA
- Mark A. Beaumont, University of Reading
Research Output
- 762 Citations
- 24 Publications
- 9 Datasets & models
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2021
Title Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.1098/rspb.2021.2193 Type Journal Article Author Mazzucco R Journal Proceedings of the Royal Society B Pages 20212193 Link Publication -
2020
Title Transcription-coupled repair in Drosophila melanogaster is independent of the mismatch repair pathway DOI 10.1101/2020.04.07.029033 Type Preprint Author Törmä L Pages 2020.04.07.029033 Link Publication -
2020
Title Polygenic adaptation: a unifying framework to understand positive selection DOI 10.1038/s41576-020-0250-z Type Journal Article Author Barghi N Journal Nature Reviews Genetics Pages 769-781 -
2019
Title Benchmarking software tools for detecting and quantifying selection in Evolve and Resequencing studies DOI 10.1101/641852 Type Preprint Author Vlachos C Pages 641852 Link Publication -
2021
Title The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.1186/s13059-021-02425-9 Type Journal Article Author Otte K Journal Genome Biology Pages 211 Link Publication -
2021
Title Additional file 3 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.6084/m9.figshare.14998772.v1 Type Other Author Nolte V Link Publication -
2021
Title Additional file 3 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.6084/m9.figshare.14998772 Type Other Author Nolte V Link Publication -
2021
Title Additional file 1 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.6084/m9.figshare.14998766.v1 Type Other Author Nolte V Link Publication -
2021
Title Additional file 1 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.6084/m9.figshare.14998766 Type Other Author Nolte V Link Publication -
2021
Title Supplemental text & figures from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121660 Type Other Author Mazzucco R Link Publication -
2025
Title Diet-induced transgenerational effects on Drosophila dormancy are not mediated by the microbiome. DOI 10.1242/jeb.250069 Type Journal Article Author Lirakis M Journal The Journal of experimental biology -
2020
Title Detecting selected haplotype blocks in evolve and resequence experiments DOI 10.1111/1755-0998.13244 Type Journal Article Author Otte K Journal Molecular Ecology Resources Pages 93-109 Link Publication -
2019
Title A generalised approach to detect selected haplotype blocks in Evolve and Resequence experiments DOI 10.1101/691659 Type Preprint Author Otte K Pages 691659 Link Publication -
2019
Title Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies DOI 10.1186/s13059-019-1770-8 Type Journal Article Author Vlachos C Journal Genome Biology Pages 169 Link Publication -
2019
Title Additional file 1 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies DOI 10.6084/m9.figshare.9637280.v1 Type Other Author Burny C Link Publication -
2019
Title Additional file 1 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies DOI 10.6084/m9.figshare.9637280 Type Other Author Burny C Link Publication -
2019
Title Additional file 2 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies DOI 10.6084/m9.figshare.9637286 Type Other Author Burny C Link Publication -
2019
Title Additional file 2 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies DOI 10.6084/m9.figshare.9637286.v1 Type Other Author Burny C Link Publication -
2020
Title The adaptive architecture is shaped by population ancestry and not by selection regime DOI 10.1101/2020.06.25.170878 Type Preprint Author Otte K Pages 2020.06.25.170878 Link Publication -
2020
Title Long-Term Dynamics Among Wolbachia Strains During Thermal Adaptation of Their Drosophila melanogaster Hosts DOI 10.3389/fgene.2020.00482 Type Journal Article Author Mazzucco R Journal Frontiers in Genetics Pages 482 Link Publication -
2016
Title Drosophila Adaptation to Viral Infection through Defensive Symbiont Evolution DOI 10.1371/journal.pgen.1006297 Type Journal Article Author Faria V Journal PLOS Genetics Link Publication -
2015
Title Genes from scratch – the evolutionary fate of de novo genes DOI 10.1016/j.tig.2015.02.007 Type Journal Article Author Schlötterer C Journal Trends in Genetics Pages 215-219 Link Publication -
2017
Title Unexpected high genetic diversity in small populations suggests maintenance by associative overdominance DOI 10.1111/mec.14262 Type Journal Article Author Schou M Journal Molecular Ecology Pages 6510-6523 -
2018
Title Readapting to DCV Infection without Wolbachia: Frequency Changes of Drosophila Antiviral Alleles Can Replace Endosymbiont Protection DOI 10.1093/gbe/evy137 Type Journal Article Author Faria V Journal Genome Biology and Evolution Pages 1783-1791 Link Publication
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2021
Link
Title Additional file 2 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.6084/m9.figshare.14998769 Type Database/Collection of data Public Access Link Link -
2021
Link
Title Data set info from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121654 Type Database/Collection of data Public Access Link Link -
2021
Link
Title Kraken2 files from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121663 Type Database/Collection of data Public Access Link Link -
2021
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Title Model summaries by replicate from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121645 Type Database/Collection of data Public Access Link Link -
2021
Link
Title Model summaries from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121666 Type Database/Collection of data Public Access Link Link -
2021
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Title More model information from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121657 Type Database/Collection of data Public Access Link Link -
2021
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Title R code used in the analysis from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121651 Type Database/Collection of data Public Access Link Link -
2021
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Title The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime DOI 10.5061/dryad.np5hqbzsp Type Database/Collection of data Public Access Link Link -
2021
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Title Bracken files from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level DOI 10.6084/m9.figshare.17121648 Type Database/Collection of data Public Access Link Link