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Wolbachia infection dynamics in evolving Drosophila populations

Wolbachia infection dynamics in evolving Drosophila populations

Christian Schlötterer (ORCID: 0000-0003-4710-6526)
  • Grant DOI 10.55776/P27630
  • Funding program Principal Investigator Projects
  • Status ended
  • Start March 1, 2015
  • End February 29, 2020
  • Funding amount € 333,587
  • Project website

Disciplines

Biology (100%)

Keywords

    Wolbachia, Experimental Evolution, Fitness, Drosophila

Abstract Final report

The infection dynamics of endosymbiont Wolbachia is complex, resulting substantial differences between populations, seasons as well as between strains. The causes of these heterogeneities are not yet understood, partly due to the complexity of natural environments. Preparatory work showed that experimental evolution of a Portuguese D. melanogaster population uncovered environment-specific fitness differences among Wolbachia strains. Based on these results, this proposal aims to characterize the dynamics of Wolbachia infection in different environments. Using whole genome sequencing in combination with SNP genotyping the trajectories of different Wolbachia strains will be followed and their relative fitness will be determined. To shed light on the habitat-specific dynamics, a range of Wolbachia strains will be tested for different fitness parameters in a common genetic background. It is anticipated that the results obtained during this project will have profound impact on the understanding of Wolbachia dynamics in natural populations.

Wolbachia is an intracellular bacterium with a broad range of consequences on its host. In this project, we studied the influence of C virus infection on Wolbachia dynamics in Drosophila melanogaster. Our analyses confirmed that Wolbachia protects its host against Drosophila C virus infection. Of particular relevance to this project was the observation that the degree of protection differs between Wolbachia strains. The same Wolbachia strain that increased during cold temperature treatment also increased during C virus exposure. In combination with the long-term dynamics of Wolbachia in hot environments, where the same Wolbachia strain from clade V increased in frequency during later generations we needed to reconsider the interpretation that the spread of the Wolbachia strain is a direct effect of temperature. Rather, we propose that these dynamics are best explained by different C virus load in the hot and cold environments. Interestingly, we could also show that the Drosophila host can develop similar C virus resistance levels in the absence of Wolbachia as the one observed in Wolbachia infected flies.

Research institution(s)
  • Veterinärmedizinische Universität Wien - 100%
International project participants
  • Luis Teixeira, Instituto Gulbenkian de Ciencia - Portugal
  • Michael Turelli, University of California at Davis - USA
  • Mark A. Beaumont, University of Reading

Research Output

  • 762 Citations
  • 24 Publications
  • 9 Datasets & models
Publications
  • 2021
    Title Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.1098/rspb.2021.2193
    Type Journal Article
    Author Mazzucco R
    Journal Proceedings of the Royal Society B
    Pages 20212193
    Link Publication
  • 2020
    Title Transcription-coupled repair in Drosophila melanogaster is independent of the mismatch repair pathway
    DOI 10.1101/2020.04.07.029033
    Type Preprint
    Author Törmä L
    Pages 2020.04.07.029033
    Link Publication
  • 2020
    Title Polygenic adaptation: a unifying framework to understand positive selection
    DOI 10.1038/s41576-020-0250-z
    Type Journal Article
    Author Barghi N
    Journal Nature Reviews Genetics
    Pages 769-781
  • 2019
    Title Benchmarking software tools for detecting and quantifying selection in Evolve and Resequencing studies
    DOI 10.1101/641852
    Type Preprint
    Author Vlachos C
    Pages 641852
    Link Publication
  • 2021
    Title The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.1186/s13059-021-02425-9
    Type Journal Article
    Author Otte K
    Journal Genome Biology
    Pages 211
    Link Publication
  • 2021
    Title Additional file 3 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.6084/m9.figshare.14998772.v1
    Type Other
    Author Nolte V
    Link Publication
  • 2021
    Title Additional file 3 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.6084/m9.figshare.14998772
    Type Other
    Author Nolte V
    Link Publication
  • 2021
    Title Additional file 1 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.6084/m9.figshare.14998766.v1
    Type Other
    Author Nolte V
    Link Publication
  • 2021
    Title Additional file 1 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.6084/m9.figshare.14998766
    Type Other
    Author Nolte V
    Link Publication
  • 2021
    Title Supplemental text & figures from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121660
    Type Other
    Author Mazzucco R
    Link Publication
  • 2025
    Title Diet-induced transgenerational effects on Drosophila dormancy are not mediated by the microbiome.
    DOI 10.1242/jeb.250069
    Type Journal Article
    Author Lirakis M
    Journal The Journal of experimental biology
  • 2020
    Title Detecting selected haplotype blocks in evolve and resequence experiments
    DOI 10.1111/1755-0998.13244
    Type Journal Article
    Author Otte K
    Journal Molecular Ecology Resources
    Pages 93-109
    Link Publication
  • 2019
    Title A generalised approach to detect selected haplotype blocks in Evolve and Resequence experiments
    DOI 10.1101/691659
    Type Preprint
    Author Otte K
    Pages 691659
    Link Publication
  • 2019
    Title Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies
    DOI 10.1186/s13059-019-1770-8
    Type Journal Article
    Author Vlachos C
    Journal Genome Biology
    Pages 169
    Link Publication
  • 2019
    Title Additional file 1 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies
    DOI 10.6084/m9.figshare.9637280.v1
    Type Other
    Author Burny C
    Link Publication
  • 2019
    Title Additional file 1 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies
    DOI 10.6084/m9.figshare.9637280
    Type Other
    Author Burny C
    Link Publication
  • 2019
    Title Additional file 2 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies
    DOI 10.6084/m9.figshare.9637286
    Type Other
    Author Burny C
    Link Publication
  • 2019
    Title Additional file 2 of Benchmarking software tools for detecting and quantifying selection in evolve and resequencing studies
    DOI 10.6084/m9.figshare.9637286.v1
    Type Other
    Author Burny C
    Link Publication
  • 2020
    Title The adaptive architecture is shaped by population ancestry and not by selection regime
    DOI 10.1101/2020.06.25.170878
    Type Preprint
    Author Otte K
    Pages 2020.06.25.170878
    Link Publication
  • 2020
    Title Long-Term Dynamics Among Wolbachia Strains During Thermal Adaptation of Their Drosophila melanogaster Hosts
    DOI 10.3389/fgene.2020.00482
    Type Journal Article
    Author Mazzucco R
    Journal Frontiers in Genetics
    Pages 482
    Link Publication
  • 2016
    Title Drosophila Adaptation to Viral Infection through Defensive Symbiont Evolution
    DOI 10.1371/journal.pgen.1006297
    Type Journal Article
    Author Faria V
    Journal PLOS Genetics
    Link Publication
  • 2015
    Title Genes from scratch – the evolutionary fate of de novo genes
    DOI 10.1016/j.tig.2015.02.007
    Type Journal Article
    Author Schlötterer C
    Journal Trends in Genetics
    Pages 215-219
    Link Publication
  • 2017
    Title Unexpected high genetic diversity in small populations suggests maintenance by associative overdominance
    DOI 10.1111/mec.14262
    Type Journal Article
    Author Schou M
    Journal Molecular Ecology
    Pages 6510-6523
  • 2018
    Title Readapting to DCV Infection without Wolbachia: Frequency Changes of Drosophila Antiviral Alleles Can Replace Endosymbiont Protection
    DOI 10.1093/gbe/evy137
    Type Journal Article
    Author Faria V
    Journal Genome Biology and Evolution
    Pages 1783-1791
    Link Publication
Datasets & models
  • 2021 Link
    Title Additional file 2 of The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.6084/m9.figshare.14998769
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Data set info from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121654
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Kraken2 files from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121663
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Model summaries by replicate from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121645
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Model summaries from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121666
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title More model information from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121657
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title R code used in the analysis from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121651
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime
    DOI 10.5061/dryad.np5hqbzsp
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Bracken files from Long-term gut microbiome dynamics in Drosophila melanogaster reveal environment-specific associations between bacterial taxa at the family level
    DOI 10.6084/m9.figshare.17121648
    Type Database/Collection of data
    Public Access
    Link Link

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