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The Energy Supply of the Endoplasmic Reticulum

The Energy Supply of the Endoplasmic Reticulum

Roland Malli (ORCID: 0000-0001-6327-8729)
  • Grant DOI 10.55776/P28529
  • Funding program Principal Investigator Projects
  • Status ended
  • Start January 1, 2016
  • End September 30, 2019
  • Funding amount € 336,042
  • Project website
  • E-mail

Disciplines

Biology (80%); Medical-Theoretical Sciences, Pharmacy (20%)

Keywords

    Adenosine-5'-Triphosphate (Atp) Transport, Endoplasmic Reticulum (Er) Functions, Fluorescence Microscopy, FRET-based genetically encoded sensors, Mitochondria Associated Membranes (Mams), Cell Physiology

Abstract Final report

The endoplasmic reticulum (ER) is a spongiform, highly branched organelle of complex cells. As a central and vital cell organelle the ER regulates many processes in living cells. Dysfunctions of ER- related processes can lead to and maintain different diseases including neuro degeneration, diseases of the cardio-vascular system and cancer. Although many essential components and functions of the ER have been identified, little is known about the energy supply of this important cell organelle. While it is clear that the ER depends on the supply of adenosine triphosphate (ATP), the most important cellular transport form of energy, the molecules and processes that accomplish the transport of ATP to and into the ER are currently largely unidentified. In this project state-of-the-art methods in biochemistry, cell physiology, and cell biology are combined in order to exactly unravel the nature and significance of the energy supply of the ER. An essential technique for this issue is to monitor real-time changes of ATP within the ER. Recently, we were able to perform such measurements by the development of refined ATP probes that consist of fluorescent proteins and provide a specific and real-time readout of ER ATP dynamics in single cells. Based on this sophisticated technique we now plan to investigate how the energy supply of the ER can be manipulated specifically, how alterations of the ER ATP content impacts on cell functions, and if such approaches can be used for the development of novel strategies to successfully treat metabolic diseases, neuro degeneration and cancer.

The Energy Supply of the Endoplasmic Reticulum The endoplasmic reticulum (ER) is a vital cellular organelle, which fulfills multiple important cell functions that depend on an efficient energy supply. Particularly protein folding within the lumen of the ER requires energy supply in the form of adenosine triphosphate (ATP), which is generated within the cytosol and more efficiently within mitochondria, the cellular power plants. The nature and importance of the ER energy supply for cell functions, cell signaling and the cellular metabolic activity is, however, quite poorly understood, despite the assumption that any imbalances of this process might be related to the pathology of several diseases such as cancer. In this research project, we investigated the energy supply of the ER in cancer cells, during cell stress and ageing by using sophisticated fluorescent biosensors. Based on our preliminary data and the novel methods and protocols we have introduced, recently a protein, referred to as SLC35B1, could be identified as an ER ATP transporter in the mammalian system. Very recently, we could confirm the importance of this protein for ER ATP import and unveiled a strong dependency of its action from calcium ions (Ca2 ) in cancer cells. Our research further showed that the uptake of Ca2 by mitochondria as well as their vicinity to the ER is highly regulated in many cancer cell types. Interestingly, also the concentration of potassium ions at enzymes, which are import for the glucose metabolism on the surface of mitochondria, seem highly relevant for the energy metabolism of certain cancer cells. Adequate disturbances of such metabolic settings with different kind of chemical compounds might be used in future as new therapeutic approaches in the treatment of human cancer. In order to gain our understanding of cancer specific peculiarities, we developed novel fluorescent biosensors. These sophisticated probes such as the GEPIIs (genetically encoded fluorescent potassium ion indicators) now allow the very first time to visualize and investigate cell signaling and metabolism with high resolution and in a high content manner. We developed a new fluorescent pH probe, referred to as pH-Lemon, which allows investigating the activity of the acidic lysosomes, which are so important for autophagy and providing substrates for energy recycling. Recently, we also introduced mito-STAR, a tool to visualize the import of a certain protein, which regulates the cellular energy metabolism, into mitochondria or its abundance within the nucleus upon cell stress. With the help of such novel probes and tools we will be able to better understand the peculiarities of cancer cells in cell signaling and metabolism. This research has therefore the potency to come up with novel strategies that are more effective in the personalized diagnosis and therapy of human cancer.

Research institution(s)
  • Medizinische Universität Graz - 100%

Research Output

  • 1589 Citations
  • 49 Publications
  • 2 Patents
  • 1 Spinouts
  • 4 Methods & Materials
  • 2 Disseminations
  • 3 Fundings
Publications
  • 2016
    Title Filling a GAP—An Optimized Probe for ER Ca2+ Imaging In Vivo
    DOI 10.1016/j.chembiol.2016.06.003
    Type Journal Article
    Author Malli R
    Journal Cell Chemical Biology
    Pages 641-643
    Link Publication
  • 2016
    Title PRMT1-mediated methylation of MICU1 determines the UCP2/3 dependency of mitochondrial Ca2+ uptake in immortalized cells
    DOI 10.1038/ncomms12897
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Nature Communications
    Pages 12897
    Link Publication
  • 2016
    Title Intact mitochondrial Ca2+ uniport is essential for agonist-induced activation of endothelial nitric oxide synthase (eNOS)
    DOI 10.1016/j.freeradbiomed.2016.11.049
    Type Journal Article
    Author Charoensin S
    Journal Free Radical Biology and Medicine
    Pages 248-259
    Link Publication
  • 2016
    Title Na+/Ca2+ exchangers and Orai channels jointly refill endoplasmic reticulum (ER) Ca2+ via ER nanojunctions in vascular endothelial cells
    DOI 10.1101/084285
    Type Preprint
    Author Di Giuro C
    Pages 084285
    Link Publication
  • 2016
    Title Development of novel FP-based probes for live-cell imaging of nitric oxide dynamics
    DOI 10.1038/ncomms10623
    Type Journal Article
    Author Eroglu E
    Journal Nature Communications
    Pages 10623
    Link Publication
  • 2016
    Title Resveratrol Specifically Kills Cancer Cells by a Devastating Increase in the Ca2+ Coupling Between the Greatly Tethered Endoplasmic Reticulum and Mitochondria
    DOI 10.1159/000447844
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Cellular Physiology and Biochemistry
    Pages 1404-1420
    Link Publication
  • 2016
    Title Yes to genetically encoded NO• sensors
    DOI 10.1038/nmeth.3827
    Type Journal Article
    Author Strack R
    Journal Nature Methods
    Pages 288-288
  • 2016
    Title Formation of Nitric Oxide by Aldehyde Dehydrogenase-2 Is Necessary and Sufficient for Vascular Bioactivation of Nitroglycerin*
    DOI 10.1074/jbc.m116.752071
    Type Journal Article
    Author Opelt M
    Journal Journal of Biological Chemistry
    Pages 24076-24084
    Link Publication
  • 2025
    Title Annexin A5 controls VDAC1-dependent mitochondrial Ca2+ homeostasis and determines cellular susceptibility to apoptosis
    DOI 10.1038/s44318-025-00454-9
    Type Journal Article
    Author Oflaz F
    Journal The EMBO Journal
    Pages 1-35
    Link Publication
  • 2021
    Title Dynamic Control of Mitochondrial Ca2+ Levels as a Survival Strategy of Cancer Cells
    DOI 10.3929/ethz-b-000472321
    Type Other
    Author Gottschalk
    Link Publication
  • 2023
    Title Annexin-A5 is fundamental for VDAC1-dependent mitochondrial Ca2+ homeostasis and determines the susceptibility to apoptosis.
    DOI 10.21203/rs.3.rs-3338004/v1
    Type Preprint
    Author Graier W
    Link Publication
  • 2021
    Title Immobilization of Recombinant Fluorescent Biosensors Permits Imaging of Extracellular Ion Signals
    DOI 10.1021/acssensors.1c01369
    Type Journal Article
    Author Burgstaller S
    Journal ACS Sensors
    Pages 3994-4000
    Link Publication
  • 2020
    Title ER-to-Golgi Transport in HeLa Cells Displays High Resilience to Ca2+ and Energy Stresses
    DOI 10.3390/cells9102311
    Type Journal Article
    Author Rauter T
    Journal Cells
    Pages 2311
    Link Publication
  • 2018
    Title Real-Time Imaging of Mitochondrial ATP Dynamics Reveals the Metabolic Setting of Single Cells
    DOI 10.1016/j.celrep.2018.09.027
    Type Journal Article
    Author Depaoli M
    Journal Cell Reports
    Link Publication
  • 2018
    Title The enigmatic ATP supply of the endoplasmic reticulum
    DOI 10.1111/brv.12469
    Type Journal Article
    Author Depaoli M
    Journal Biological Reviews
    Pages 610-628
    Link Publication
  • 2018
    Title Intracellular Ca2+ release decelerates mitochondrial cristae dynamics within the junctions to the endoplasmic reticulum
    DOI 10.1007/s00424-018-2133-0
    Type Journal Article
    Author Gottschalk B
    Journal Pflügers Archiv - European Journal of Physiology
    Pages 1193-1203
    Link Publication
  • 2018
    Title Targeting Mitochondria to Counteract Age-Related Cellular Dysfunction
    DOI 10.3390/genes9030165
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Genes
    Pages 165
    Link Publication
  • 2018
    Title Genetic biosensors for imaging nitric oxide in single cells
    DOI 10.1016/j.freeradbiomed.2018.01.027
    Type Journal Article
    Author Eroglu E
    Journal Free Radical Biology and Medicine
    Pages 50-58
    Link Publication
  • 2019
    Title Live-Cell Imaging of Physiologically Relevant Metal Ions Using Genetically Encoded FRET-Based Probes
    DOI 10.3390/cells8050492
    Type Journal Article
    Author Bischof H
    Journal Cells
    Pages 492
    Link Publication
  • 2021
    Title A Co-Culture-Based Multiparametric Imaging Technique to Dissect Local H2O2 Signals with Targeted HyPer7
    DOI 10.3390/bios11090338
    Type Journal Article
    Author Secilmis M
    Journal Biosensors
    Pages 338
    Link Publication
  • 2021
    Title Sigma-1 Receptor Promotes Mitochondrial Bioenergetics by Orchestrating ER Ca2+ Leak during Early ER Stress
    DOI 10.3390/metabo11070422
    Type Journal Article
    Author Koshenov Z
    Journal Metabolites
    Pages 422
    Link Publication
  • 2021
    Title Near-UV Light Induced ROS Production Initiates Spatial Ca2+ Spiking to Fire NFATc3 Translocation
    DOI 10.3390/ijms22158189
    Type Journal Article
    Author Oflaz F
    Journal International Journal of Molecular Sciences
    Pages 8189
    Link Publication
  • 2021
    Title Dynamic Control of Mitochondrial Ca2+ Levels as a Survival Strategy of Cancer Cells
    DOI 10.3389/fcell.2021.614668
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Frontiers in Cell and Developmental Biology
    Pages 614668
    Link Publication
  • 2018
    Title Enhanced inter-compartmental Ca2+ flux modulates mitochondrial metabolism and apoptotic threshold during aging
    DOI 10.1016/j.redox.2018.11.003
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Redox Biology
    Pages 458-466
    Link Publication
  • 2018
    Title Real-Time Imaging of Nitric Oxide Signals in Individual Cells Using geNOps
    DOI 10.1007/978-1-4939-7695-9_3
    Type Book Chapter
    Author Eroglu E
    Publisher Springer Nature
    Pages 23-34
  • 2018
    Title High-Resolution Imaging of STIM/Orai Subcellular Localization Using Array Confocal Laser Scanning Microscopy
    DOI 10.1007/978-1-4939-8704-7_15
    Type Book Chapter
    Author Deak A
    Publisher Springer Nature
    Pages 175-187
  • 2019
    Title Tracking intra- and inter-organelle signaling of mitochondria
    DOI 10.3929/ethz-b-000379999
    Type Other
    Author Madreiter-Sokolowski
    Link Publication
  • 2019
    Title Development and Application of Sub-Mitochondrial Targeted Ca2 + Biosensors
    DOI 10.3929/ethz-b-000373042
    Type Other
    Author Gottschalk
    Link Publication
  • 2019
    Title Glycogen Synthase Kinase 3 Beta Controls Presenilin-1-Mediated Endoplasmic Reticulum Ca2+ Leak Directed to Mitochondria in Pancreatic Islets and beta-Cells
    DOI 10.33594/000000005
    Type Journal Article
    Author Klec C
    Journal Cellular Physiology & Biochemistry
    Pages 57-75
    Link Publication
  • 2019
    Title Mitochondria supply ATP to the ER through a mechanism antagonized by cytosolic Ca2+
    DOI 10.1101/591685
    Type Preprint
    Author Yong J
    Pages 591685
    Link Publication
  • 2019
    Title pH-Lemon, a Fluorescent Protein-Based pH Reporter for Acidic Compartments
    DOI 10.1021/acssensors.8b01599
    Type Journal Article
    Author Burgstaller S
    Journal ACS Sensors
    Pages 883-891
    Link Publication
  • 2019
    Title Development and Application of Sub-Mitochondrial Targeted Ca2 + Biosensors
    DOI 10.3389/fncel.2019.00449
    Type Journal Article
    Author Waldeck-Weiermair M
    Journal Frontiers in Cellular Neuroscience
    Pages 449
    Link Publication
  • 2019
    Title Presenilin-1 Established ER-Ca2+ Leak: a Follow Up on Its Importance for the Initial Insulin Secretion in Pancreatic Islets and ß-Cells Upon Elevated Glucose
    DOI 10.33594/000000158
    Type Journal Article
    Author Klec C
    Journal Cellular Physiology & Biochemistry
    Pages 573-586
    Link Publication
  • 2019
    Title MICU1 controls cristae junction and spatially anchors mitochondrial Ca2+ uniporter complex
    DOI 10.1038/s41467-019-11692-x
    Type Journal Article
    Author Gottschalk B
    Journal Nature Communications
    Pages 3732
    Link Publication
  • 2019
    Title Mitochondria supply ATP to the ER through a mechanism antagonized by cytosolic Ca2+
    DOI 10.7554/elife.49682
    Type Journal Article
    Author Yong J
    Journal eLife
    Link Publication
  • 2019
    Title Visualization of Sirtuin 4 Distribution between Mitochondria and the Nucleus, Based on Bimolecular Fluorescence Self-Complementation
    DOI 10.3390/cells8121583
    Type Journal Article
    Author Ramadani-Muja J
    Journal Cells
    Pages 1583
    Link Publication
  • 2019
    Title Tracking intra- and inter-organelle signaling of mitochondria
    DOI 10.1111/febs.15103
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal The FEBS Journal
    Pages 4378-4401
    Link Publication
  • 2020
    Title Metabolic Profiling of Single Cancer Cells Using Mitochondrial ATP Probes
    DOI 10.1016/j.xpro.2020.100048
    Type Journal Article
    Author Rauter T
    Journal STAR Protocols
    Pages 100048
    Link Publication
  • 2019
    Title Mitochondrial–Endoplasmic Reticulum Interplay: A Lifelong On–Off Relationship?
    DOI 10.1177/2515256419861227
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Contact
    Pages 2515256419861227
    Link Publication
  • 2019
    Title Live cell imaging of signaling and metabolic activities
    DOI 10.1016/j.pharmthera.2019.06.003
    Type Journal Article
    Author Depaoli M
    Journal Pharmacology & Therapeutics
    Pages 98-119
    Link Publication
  • 2019
    Title Purification and Application of Genetically Encoded Potassium Ion Indicators for Quantification of Potassium Ion Concentrations within Biological Samples
    DOI 10.1002/cpch.71
    Type Journal Article
    Author Bischof H
    Journal Current Protocols in Chemical Biology
    Link Publication
  • 2022
    Title MICU1 controls spatial membrane potential gradients and guides Ca2+ fluxes within mitochondrial substructures
    DOI 10.1038/s42003-022-03606-3
    Type Journal Article
    Author Gottschalk B
    Journal Communications Biology
    Pages 649
    Link Publication
  • 2022
    Title Sigma-1 Receptor Modulation by Ligands Coordinates Cancer Cell Energy Metabolism
    DOI 10.3390/biom12060762
    Type Journal Article
    Author Oflaz F
    Journal Biomolecules
    Pages 762
    Link Publication
  • 2017
    Title Application of Genetically Encoded Fluorescent Nitric Oxide (NO•) Probes, the geNOps, for Real-time Imaging of NO• Signals in Single Cells
    DOI 10.3791/55486
    Type Journal Article
    Author Eroglu E
    Journal Journal of Visualized Experiments : JoVE
    Pages 55486
    Link Publication
  • 2017
    Title Novel genetically encoded fluorescent probes enable real-time detection of potassium in vitro and in vivo
    DOI 10.1038/s41467-017-01615-z
    Type Journal Article
    Author Bischof H
    Journal Nature Communications
    Pages 1422
    Link Publication
  • 2017
    Title Real-time visualization of distinct nitric oxide generation of nitric oxide synthase isoforms in single cells
    DOI 10.1016/j.niox.2017.09.001
    Type Journal Article
    Author Eroglu E
    Journal Nitric Oxide
    Pages 59-67
    Link Publication
  • 2017
    Title UCP2 and PRMT1 are key prognostic markers for lung carcinoma patients
    DOI 10.18632/oncotarget.20571
    Type Journal Article
    Author Madreiter-Sokolowski C
    Journal Oncotarget
    Pages 80278-80285
    Link Publication
  • 2017
    Title The Role of Mitochondria in the Activation/Maintenance of SOCE: The Contribution of Mitochondrial Ca2+ Uptake, Mitochondrial Motility, and Location to Store-Operated Ca2+ Entry
    DOI 10.1007/978-3-319-57732-6_16
    Type Book Chapter
    Author Malli R
    Publisher Springer Nature
    Pages 297-319
  • 2017
    Title Application of Genetically Encoded Fluorescent Nitric Oxide (NO•) Probes, the geNOps, for Real-time Imaging of NO• Signals in Single Cells
    DOI 10.3791/55486-v
    Type Journal Article
    Author Eroglu E
    Journal Journal of Visualized Experiments
    Link Publication
Patents
  • 2018 Patent Id: CA3062431
    Title GENETICALLY ENCODED POTASSIUM ION INDICATORS
    Type Patent application published
    patentId CA3062431
    Website Link
  • 2016 Patent Id: WO2016066647
    Title GENETICALLY ENCODED NITROGEN MONOXIDE SENSORS (GENOPS)
    Type Patent application published
    patentId WO2016066647
    Website Link
Spinouts
  • 2016 Link
    Title NGFI GmbH
    Link Link
Methods & Materials
  • 2019 Link
    Title pH-Lemon
    Type Technology assay or reagent
    Public Access
    Link Link
  • 2017 Link
    Title Genetically encoded fluorescent potassium ion indicators (GEPIIs)
    Type Technology assay or reagent
    Public Access
    Link Link
  • 2016 Link
    Title Genetically encoded Nitric Oxide Probes (geNOps)
    Type Technology assay or reagent
    Public Access
    Link Link
  • 0 Link
    Title mito-STAR
    Type Technology assay or reagent
    Link Link
Disseminations
  • 0
    Title Interview for local/regional news
    Type A magazine, newsletter or online publication
  • 0
    Title School Visit
    Type A talk or presentation
Fundings
  • 2017
    Title Insulin-mediated ROS/RNS signaling in cardiac myocytes
    Type Other
    Start of Funding 2017
    Funder Austrian Science Fund (FWF)
  • 2018
    Title Mitochondrial calcium homeostasis and aging
    Type Other
    Start of Funding 2018
    Funder Austrian Science Fund (FWF)
  • 2018
    Title Development of genetically encoded fluorescent K+ probes
    Type Other
    Start of Funding 2018
    Funder Austrian Science Fund (FWF)

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