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Analyses of inner brain Opsins in the vertebrate CNS

Analyses of inner brain Opsins in the vertebrate CNS

Kristin Tessmar-Raible (ORCID: 0000-0002-8038-1741)
  • Grant DOI 10.55776/P28970
  • Funding program Principal Investigator Projects
  • Status ended
  • Start January 1, 2016
  • End December 31, 2019
  • Funding amount € 345,146

Disciplines

Biology (100%)

Keywords

    Photoreceptors, Opsin, Brain, Zebrafish, Medaka, Evolution

Abstract

Opsins are light receptive proteins expressed in vertebrate eyes mediating vision and circadian entrainment. Yet, Opsins are also present in many cells outside the eyes. Over recent years, work by multiple groups has shown that many- if not the majority- of these non-visual Opsins can also function as light receptors. Consistently, several studies established that measurable amounts of light penetrate vertebrates brains. Here, we focus on the functional investigation of a particularly slowly evolving group of ciliary- type Opsins, the encephalopsin/ tmt-opsin (ETO) group in zebrafish and medakafish. Our previous work revealed so far that vertebrate brains express these Opsins in specific subsets of interneurons and motorneurons. We also showed that light can change the membrane potential of neurons at the position of tmtopsin expressing cells in medaka fish tectal slices. This led us to hypothesize that environmental light impacts on the information processing in the vertebrate brain by modulating the membrane potential of Opsin-expressing neurons, and hence might lead to light-dependent behavioural alterations. We meanwhile generated mutations in medakafish tmtopsin1b and 2. First analyses of different tmtopsin1b mutant alleles revealed a consistent behavioral phenotype, as well as changes in the levels of a specific preprohormone. With this principle evidence of functional importance at hand, we now aim to further explore these mutants on additional behavioral, molecular and cellular levels. The behavioral analyses include assays on different behaviors, as well as circadian entrainment tests. The molecular analyses will expand on the already uncovered preprohormone target, but also include additional quantitative sequencing approaches. The cellular level aims at unraveling the neuronal projections of tmtopsin cells in vivo to obtain a better understanding of the input and output areas of these cells. The labeled tmtopsin+ neurons will also allow us to perform electrophysiological experiments under different light conditions, as well as in wildtype vs. mutant fish. This combination of approaches will allow us to gain a more comprehensive understanding of the function of Opsins outside the eyes. In order to discriminate between species-specific and more widely conserved functions, we also added an evolutionary dimension to our proposal. Zebrafish and medaka inhabit different habitats and are separated by about the same evolutionary distance like birds versus mammals. We aim to compare the function of a selected set of orthologous ETO family members between both species. With our work we likely gain a better understanding of the function of non-visual photoreception, a phenomenon present across the vertebrate phylum. This should also allow a better judgement of the impact of light pollution (artificial light at the wrong time and place) on animals. Last, but not least, the non-visual Opsins under study here might also be useful for new optogenetic applications in the future.

Research institution(s)
  • Universität Wien - 100%

Research Output

  • 780 Citations
  • 30 Publications
  • 3 Artistic Creations
  • 4 Datasets & models
  • 3 Scientific Awards
  • 2 Fundings
Publications
  • 2022
    Title Melanopsin elevates locomotor activity during the wake state of the diurnal zebrafish
    DOI 10.15252/embr.202051528
    Type Journal Article
    Author Dekens M
    Journal The EMBO Reports
    Link Publication
  • 2021
    Title The Nereid on the rise: Platynereis as a model system.
    DOI 10.17863/cam.78076
    Type Journal Article
    Author Randel N
    Link Publication
  • 2021
    Title TMT-Opsins differentially modulate medaka brain function in a context-dependent manner.
    DOI 10.1371/journal.pbio.3001012
    Type Journal Article
    Author Fontinha Bm
    Journal PLoS biology
  • 2021
    Title The Nereid on the rise: Platynereis as a model system
    DOI 10.17863/cam.76093
    Type Other
    Author Randel N
    Link Publication
  • 2021
    Title The Nereid on the rise: Platynereis as a model system.
    DOI 10.17863/cam.77524
    Type Other
    Author Randel N
    Link Publication
  • 2021
    Title The Nereid on the rise: Platynereis as a model system
    DOI 10.5281/zenodo.4907399
    Type Other
    Author Ozpolat B
    Link Publication
  • 2021
    Title The Nereid on the rise: Platynereis as a model system
    DOI 10.5281/zenodo.4907400
    Type Other
    Author Ozpolat B
    Link Publication
  • 2021
    Title Timing requires the right amount and type of light
    DOI 10.1038/s41559-020-01373-0
    Type Journal Article
    Author Hüppe L
    Journal Nature Ecology & Evolution
  • 2021
    Title Seasonal variation in UVA light drives hormonal and behavioural changes in a marine annelid via a ciliary opsin.
    DOI 10.1038/s41559-020-01356-1
    Type Journal Article
    Author Häfker Ns
    Journal Nature ecology & evolution
    Pages 204-218
  • 2021
    Title Characterization of cephalic and non-cephalic sensory cell types provides insight into joint photo- and mechanoreceptor evolution
    DOI 10.1101/2021.01.10.426124
    Type Preprint
    Author Revilla-I-Domingo R
    Pages 2021.01.10.426124
    Link Publication
  • 2020
    Title A versatile depigmentation, clearing, and labeling method for exploring nervous system diversity
    DOI 10.1126/sciadv.aba0365
    Type Journal Article
    Author Pende M
    Journal Science Advances
    Link Publication
  • 2021
    Title The Nereid on the rise: Platynereis as a model system
    DOI 10.1186/s13227-021-00180-3
    Type Journal Article
    Author Özpolat B
    Journal EvoDevo
    Pages 10
    Link Publication
  • 2021
    Title Characterization of tmt-opsin2 in Medaka Fish Provides Insight Into the Interplay of Light and Temperature for Behavioral Regulation
    DOI 10.3389/fphys.2021.726941
    Type Journal Article
    Author Zekoll T
    Journal Frontiers in Physiology
    Pages 726941
    Link Publication
  • 2021
    Title Characterization of cephalic and non-cephalic sensory cell types provides insight into joint photo- and mechanoreceptor evolution
    DOI 10.7554/elife.66144
    Type Journal Article
    Author Revilla-I-Domingo R
    Journal eLife
    Link Publication
  • 2022
    Title The cation exchanger Letm1, circadian rhythms, and NAD(H) levels interconnect in diurnal zebrafish
    DOI 10.26508/lsa.202101194
    Type Journal Article
    Author Dao P
    Journal Life Science Alliance
    Link Publication
  • 2019
    Title Differential impacts of the head on Platynereis dumerilii peripheral circadian rhythms
    DOI 10.1101/593772
    Type Preprint
    Author Arboleda E
    Pages 593772
    Link Publication
  • 2019
    Title Combined transcriptome and proteome profiling reveals specific molecular brain signatures for sex, maturation and circalunar clock phase
    DOI 10.7554/elife.41556
    Type Journal Article
    Author Schenk S
    Journal eLife
    Link Publication
  • 2019
    Title Rhythms of behavior: are the times changin’?
    DOI 10.1016/j.conb.2019.10.005
    Type Journal Article
    Author Häfker N
    Journal Current Opinion in Neurobiology
    Pages 55-66
    Link Publication
  • 2019
    Title TMT-Opsins differentially modulate medaka brain function in a context-dependent manner
    DOI 10.1101/698480
    Type Preprint
    Author Fontinha B
    Pages 698480
    Link Publication
  • 2019
    Title Differential Impacts of the Head on Platynereis dumerilii Peripheral Circadian Rhythms
    DOI 10.3389/fphys.2019.00900
    Type Journal Article
    Author Arboleda E
    Journal Frontiers in Physiology
    Pages 900
    Link Publication
  • 2017
    Title Instrument design and protocol for the study of light controlled processes in aquatic organisms, and its application to examine the effect of infrared light on zebrafish
    DOI 10.5445/ir/1000067302
    Type Other
    Author Dekens M
    Link Publication
  • 2018
    Title Additional file 5: of A Go-type opsin mediates the shadow reflex in the annelid Platynereis dumerilii
    DOI 10.6084/m9.figshare.6158174
    Type Other
    Author Ayers T
    Link Publication
  • 2018
    Title Additional file 6: of A Go-type opsin mediates the shadow reflex in the annelid Platynereis dumerilii
    DOI 10.6084/m9.figshare.6158189.v1
    Type Other
    Author Ayers T
    Link Publication
  • 2018
    Title Ciliary and rhabdomeric photoreceptor-cell circuits form a spectral depth gauge in marine zooplankton
    DOI 10.1101/251686
    Type Preprint
    Author Verasztó C
    Pages 251686
    Link Publication
  • 2018
    Title Ciliary and rhabdomeric photoreceptor-cell circuits form a spectral depth gauge in marine zooplankton
    DOI 10.7554/elife.36440
    Type Journal Article
    Author Verasztó C
    Journal eLife
    Link Publication
  • 2020
    Title The Still Dark Side of the Moon: Molecular Mechanisms of Lunar-Controlled Rhythms and Clocks
    DOI 10.1016/j.jmb.2020.03.009
    Type Journal Article
    Author Andreatta G
    Journal Journal of Molecular Biology
    Pages 3525-3546
    Link Publication
  • 2018
    Title A Go-type opsin mediates the shadow reflex in the annelid Platynereis dumerilii
    DOI 10.1186/s12915-018-0505-8
    Type Journal Article
    Author Ayers T
    Journal BMC Biology
    Pages 41
    Link Publication
  • 2017
    Title An Overview of Monthly Rhythms and Clocks
    DOI 10.3389/fneur.2017.00189
    Type Journal Article
    Author Raible F
    Journal Frontiers in Neurology
    Pages 189
    Link Publication
  • 2017
    Title Instrument design and protocol for the study of light controlled processes in aquatic organisms, and its application to examine the effect of infrared light on zebrafish
    DOI 10.1371/journal.pone.0172038
    Type Journal Article
    Author Dekens M
    Journal PLOS ONE
    Link Publication
  • 2017
    Title Virtual reality for freely moving animals
    DOI 10.1038/nmeth.4399
    Type Journal Article
    Author Stowers J
    Journal Nature Methods
    Pages 995-1002
    Link Publication
Artistic Creations
  • 2018 Link
    Title Additional file 4: of A Go-type opsin mediates the shadow reflex in the annelid Platynereis dumerilii
    DOI 10.6084/m9.figshare.6158165
    Type Image
    Link Link
  • 2018 Link
    Title Additional file 3: of A Go-type opsin mediates the shadow reflex in the annelid Platynereis dumerilii
    DOI 10.6084/m9.figshare.6158144
    Type Image
    Link Link
  • 2018 Link
    Title Additional file 2: of A Go-type opsin mediates the shadow reflex in the annelid Platynereis dumerilii
    DOI 10.6084/m9.figshare.6158129
    Type Image
    Link Link
Datasets & models
  • 2021 Link
    Title Additional file 2 of The Nereid on the rise: Platynereis as a model system
    DOI 10.6084/m9.figshare.16689648.v1
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Additional file 2 of The Nereid on the rise: Platynereis as a model system
    DOI 10.6084/m9.figshare.16689648
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Additional file 1 of The Nereid on the rise: Platynereis as a model system
    DOI 10.6084/m9.figshare.16689645.v1
    Type Database/Collection of data
    Public Access
    Link Link
  • 2021 Link
    Title Additional file 1 of The Nereid on the rise: Platynereis as a model system
    DOI 10.6084/m9.figshare.16689645
    Type Database/Collection of data
    Public Access
    Link Link
Scientific Awards
  • 2019
    Title Board of Reviewing Editors eLife
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International
  • 2019
    Title 21st Stephen M. Schütze Memorial Award, Columbia University, New York
    Type Research prize
    Level of Recognition Continental/International
  • 2018
    Title Associate editor: Frontiers in Physiology, special section Chronobiology
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International
Fundings
  • 2020
    Title ERC-CoG2018 Mari.Time
    Type Research grant (including intramural programme)
    Start of Funding 2020
  • 2020
    Title SFB #78, Project: The impact of circadian clock genes on progenitor differentiation and adult stem cells
    Type Research grant (including intramural programme)
    Start of Funding 2020

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