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Proton gradients in bacterial protein translocation

Proton gradients in bacterial protein translocation

Denis Knyazev (ORCID: 0000-0003-3197-1849)
  • Grant DOI 10.55776/P29841
  • Funding program Principal Investigator Projects
  • Status ended
  • Start December 1, 2016
  • End November 30, 2021
  • Funding amount € 387,354
  • Project website

Disciplines

Biology (100%)

Keywords

    SecYEG, Arrest Peptide, Proton-Motive Force, Single Dye Tracing, Single Channel Electrophysiology, Protein Reconstitution

Abstract Final report

The bacterial translocon SecYEG transports bacterial proteins across the plasma membrane. As any directed movement, translocation requires energy. It may come from ATP (adenosine triphosphate) hydrolysis that enables the motor protein SecA to push proteins through SecYEG channels. Alternatively translocation may directly be driven by the transmembrane proton gradient. This appears to be more efficient than first using this proton gradient to produce ATP. The project aims at exploring how the proton gradient drives protein translocation. We will use state of the art techniques, which allow monitoring single translocation complexes both optically and electrically in a single experiment. Insight into the role of protons may be used to manipulate the protein translocation rate for biotechnological purposes or to be able to monitor folding of membrane proteins.

Proton gradients in bacterial protein translocation The bacterial translocon SecYEG transports bacterial proteins across the plasma membrane. As any directed movement, translocation requires energy. It may come from ATP (adenosine triphosphate) hydrolysis that enables the motor protein SecA to push proteins through SecYEG channels. Alternatively, translocation may be directly driven by the transmembrane proton gradient, the so-called proton-motive force, PMF. The project studied the regulation of SecYEG by the components of PMF, the transmembrane electrical potential, and the difference in pH across the cell membrane. We developed a state-of-the-art technique that allows monitoring the dynamics of a single translocation complex. This technique enabled us to identify regions in the translocon which sense the PMF. The obtained insight may be used to manipulate the protein translocation rate for biotechnological purposes.

Research institution(s)
  • Universität Linz - 95%
  • FH Oberösterreich - 5%
Project participants
  • Birgit Plochberger, FH Oberösterreich , associated research partner

Research Output

  • 58 Citations
  • 8 Publications
Publications
  • 2023
    Title Biophysical quantification of unitary solute and solvent permeabilities to enable translation to membrane science
    DOI 10.1016/j.memsci.2022.121308
    Type Journal Article
    Author Wachlmayr J
    Journal Journal of Membrane Science
    Pages 121308
    Link Publication
  • 2023
    Title Steady-state polypeptide transfer from the translocon to the membrane
    DOI 10.1101/2023.01.10.523415
    Type Preprint
    Author Knyazev D
    Pages 2023.01.10.523415
    Link Publication
  • 2023
    Title YidC from Escherichia coli Forms an Ion-Conducting Pore upon Activation by Ribosomes
    DOI 10.3390/biom13121774
    Type Journal Article
    Author Knyazev D
    Journal Biomolecules
    Pages 1774
    Link Publication
  • 2023
    Title YidC from Escherichia coli forms an ion-conducting pore upon activation by ribosomes
    DOI 10.1101/2023.05.10.540180
    Type Preprint
    Author Knyazev D
    Pages 2023.05.10.540180
    Link Publication
  • 2020
    Title Voltage Sensing in Bacterial Protein Translocation
    DOI 10.3390/biom10010078
    Type Journal Article
    Author Knyazev D
    Journal Biomolecules
    Pages 78
    Link Publication
  • 2018
    Title Driving Forces of Translocation Through Bacterial Translocon SecYEG
    DOI 10.1007/s00232-017-0012-9
    Type Journal Article
    Author Knyazev D
    Journal The Journal of Membrane Biology
    Pages 329-343
    Link Publication
  • 2020
    Title Voltage Sensing in Bacterial Protein Translocation
    DOI 10.17169/refubium-26309
    Type Other
    Author Knyazev D
    Link Publication
  • 2019
    Title Modelling of conformational transitions of fluorescent-labelled proteins
    Type PhD Thesis
    Author Ekaterina Sobakinskaja
    Link Publication

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