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Fighting Resistance in CLL (FIRE-CLL)

Fighting Resistance in CLL (FIRE-CLL)

Alexander Egle (ORCID: 0000-0003-0648-4416)
  • Grant DOI 10.55776/I2795
  • Funding program International - Multilateral Initiatives
  • Status ended
  • Start March 15, 2016
  • End September 14, 2019
  • Funding amount € 298,500
  • Project website

ERA-NET: TRANSCAN

Disciplines

Biology (10%); Clinical Medicine (20%); Medical-Theoretical Sciences, Pharmacy (70%)

Keywords

    Chronic Lymphocytic Leukemia, Next Generation Sequencing, Tumor Heterogeneity, Therapy Resistance, Microenvironment

Abstract Final report

Chronic lymphocytic leukemia (CLL) is a common cancer an its incidence and burden will further increase in our aging Western society. CLL is clinically very diverse, ranging from death within 2-3 years to indolent disease, which is determined by both, the genetic background of the patient but also from the supporting and protecting microenvironment of the cancer cells. One of the clinical relevant questions and challenges is to predict the prognosis of each single patient and to estimate potential therapy success or relapse. In fact all CLL patients relapse sooner or later as none of the currently used standard chemotherapies or novel, targeted and very efficient immunotherapeutics offer long lasting cure. According to very new research results, mutations in distinct cancer genes may be suitable in predicting the course of disease and are also helpful in identifying patients that may become therapy resistant. The analysis of such mutations on a patient-specific basis and the knowledge of how genetic changes in the cancer cell interfere and shape the microenvironment in its tumorsupporting role, is the main topic that will be addressed by FIRE-CLL. Together with leading experts in the field of CLL, both on the clinical and on the scientific site, we aim to fight resistance in CLL by developing tailored therapy concepts which are based on genetic heterogeneity with the aim to turn CLL into a curable disease.

Our data showed that clonal evolution of leukemic cells in mice is extremely dynamic, particularly upon transfer of primary tumors into syngeneic wildtype recipient mice. This plasticity is not only based on the occurrence of novel subclonal somatic mutations but also on a high initial B cell receptor (BCR) specific heterogeneity. This means, that although most of the leukemic cells of a particular CLL case have the same BCR specificity, there are many minor clones with a distinctive BCR profile and hence, also with a distinctive somatic mutation landscape. These minor clones can dramatically expand upon transfer. Thus, interrogating genetic landscapes of TCL1 tumors alongside immune phenotyping in wildtype, immune compromised or genetically modified hosts or in mice subjected to preclinical treatment studies will definitely yield important insight into cancer-immune/microenvironment crosstalk during disease progression and treatment response. The findings from our IRF4 projects are clinically relevant, as immunotherapies were considered as the only treatment option with the potential to cure the disease in the long term, however, strategies to modulate the immune system were less successful in the clinical practice. Treatment of primary CLL patients with Ibrutinib in vivo downregulated genes involved in immune response, including IRF4 and PDL1 in CLL cells as well as PD1 on T-cells. The new findings might explain why Ibrutinib refractory CLL patients did not respond to PD1 treatment in vivo.

Research institution(s)
  • Paracelsus Med.-Priv.-Univ. Salzburg / SALK - 100%
International project participants
  • Florence Cymbalista, Assistance Publique - Hopitaux de Paris - France
  • Martina Seiffert, Deutsches Krebsforschungszentrum - Germany
  • Stephan Stilgenbauer, Universität Ulm - Germany
  • Idit Shachar, Weizmann Institute of Science - Israel
  • Dimitar Efremov, International Centre for Genetic Engineering and Biotechnology - Italy
  • Eric Eldering, Academic Medical Centre Amsterdam - Netherlands

Research Output

  • 203 Citations
  • 9 Publications
  • 2 Methods & Materials
  • 1 Datasets & models
  • 1 Disseminations
  • 1 Medical Products
  • 1 Fundings
Publications
  • 2020
    Title The Effect of SF3B1 Mutation on the DNA Damage Response and Nonsense-Mediated mRNA Decay in Cancer
    DOI 10.5167/uzh-202796
    Type Other
    Author Derks
    Link Publication
  • 2021
    Title The Effect of SF3B1 Mutation on the DNA Damage Response and Nonsense-Mediated mRNA Decay in Cancer
    DOI 10.3389/fonc.2020.609409
    Type Journal Article
    Author Leeksma A
    Journal Frontiers in Oncology
    Pages 609409
    Link Publication
  • 2019
    Title B-cell–specific IRF4 deletion accelerates chronic lymphocytic leukemia development by enhanced tumor immune evasion
    DOI 10.1182/blood.2019000973
    Type Journal Article
    Author Asslaber D
    Journal Blood
    Pages 1717-1729
    Link Publication
  • 2019
    Title BIRC3 Expression Predicts CLL Progression and Defines Treatment Sensitivity via Enhanced NF-?B Nuclear Translocation
    DOI 10.1158/1078-0432.ccr-18-1548
    Type Journal Article
    Author Asslaber D
    Journal Clinical Cancer Research
    Pages 1901-1912
    Link Publication
  • 2018
    Title Exome sequencing of the TCL1 mouse model for CLL reveals genetic heterogeneity and dynamics during disease development
    DOI 10.1038/s41375-018-0260-4
    Type Journal Article
    Author Zaborsky N
    Journal Leukemia
    Pages 957-968
    Link Publication
  • 2018
    Title Fludarabine and rituximab with escalating doses of lenalidomide followed by lenalidomide/rituximab maintenance in previously untreated chronic lymphocytic leukaemia (CLL): the REVLIRIT CLL-5 AGMT phase I/II study
    DOI 10.1007/s00277-018-3380-z
    Type Journal Article
    Author Egle A
    Journal Annals of Hematology
    Pages 1825-1839
    Link Publication
  • 2020
    Title Stromal cell protein kinase C-ß inhibition enhances chemosensitivity in B cell malignancies and overcomes drug resistance
    DOI 10.1126/scitranslmed.aax9340
    Type Journal Article
    Author Park E
    Journal Science Translational Medicine
    Link Publication
  • 2018
    Title Correction to: Fludarabine and rituximab with escalating doses of lenalidomide followed by lenalidomide/rituximab maintenance in previously untreated chronic lymphocytic leukaemia (CLL): the REVLIRIT CLL-5 AGMT phase I/II study
    DOI 10.1007/s00277-018-3403-9
    Type Journal Article
    Author Egle A
    Journal Annals of Hematology
    Pages 1745-1745
    Link Publication
  • 2017
    Title TIGIT expressing CD4+T cells represent a tumor-supportive T cell subset in chronic lymphocytic leukemia
    DOI 10.1080/2162402x.2017.1371399
    Type Journal Article
    Author Catakovic K
    Journal OncoImmunology
    Link Publication
Methods & Materials
  • 2018 Link
    Title BCR Sequencing in murine B cells
    Type Technology assay or reagent
    Public Access
    Link Link
  • 2018 Link
    Title next generation sequencing of mouse samples
    Type Improvements to research infrastructure
    Public Access
    Link Link
Datasets & models
  • 2018 Link
    Title Exome sequencing of mouse CLL samples
    Type Database/Collection of data
    Public Access
    Link Link
Disseminations
  • 2017
    Title Transcan Meeting
    Type Participation in an activity, workshop or similar
Medical Products
  • 2016 Link
    Title Explorative trial on Lenalidomide added to chemoimmunotherapy including molecular analyses
    Type Therapeutic Intervention - Drug
    Link Link
Fundings
  • 2020
    Title Analysis of Chronic Lymphocytic Leukemia-immune interactions to understand clonal evolution and anti-cancer immunity
    Type Research grant (including intramural programme)
    Start of Funding 2020

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