Evolution of secondary metabolite synthesis in lichens
Evolution of secondary metabolite synthesis in lichens
Disciplines
Biology (100%)
Keywords
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Evolution,
Lichens,
Melanin,
Anthraquinone,
Paralogy,
Polyketide Synthase
Lichen mycobionts recall miniature chemical laboratories producing a vast variety of more than 800 different secondary metabolites. They represent ideal model organims to investigate the evolution of secondary chemistry. One focus in this project will be the diversity and evolution of polyketide synthase genes which are involved-in major secondary metabolite pathways. By comparison with the organismal phylogenees based on ribosomal DNA sequences, we will assess the patterns of homology and paralogy of these genes. A genomic library will be used to investigated the diversity of polyketide synthase genes in a selected lichen mycobiont and to explore other genes responsible for the production of anthraquinones in this model organism. In other lichens we will elucidate the phylogeny of genes which are involved in the melanin and anthraquinone biosynthetic pathways by primer-based approaches. Co-phylogenetic studies with several genes will be used to analyse the evolution of biosynthetic pathways.
Lichen mycobionts recall miniature chemical laboratories producing a vast variety of more than 800 different secondary metabolites. They represent ideal model organims to investigate the evolution of secondary chemistry. One focus in this project will be the diversity and evolution of polyketide synthase genes which are involved-in major secondary metabolite pathways. By comparison with the organismal phylogenees based on ribosomal DNA sequences, we will assess the patterns of homology and paralogy of these genes. A genomic library will be used to investigated the diversity of polyketide synthase genes in a selected lichen mycobiont and to explore other genes responsible for the production of anthraquinones in this model organism. In other lichens we will elucidate the phylogeny of genes which are involved in the melanin and anthraquinone biosynthetic pathways by primer-based approaches. Co-phylogenetic studies with several genes will be used to analyse the evolution of biosynthetic pathways.
- Universität Graz - 100%
- Sandra Scherrer, University of Zurich - Switzerland
Research Output
- 44 Citations
- 2 Publications
-
2008
Title A transcribed polyketide synthase gene from Xanthoria elegans DOI 10.1016/j.mycres.2008.08.007 Type Journal Article Author Brunauer G Journal Mycological Research Pages 82-92 -
2007
Title Purifying selection is a prevailing motif in the evolution of ketoacyl synthase domains of polyketide synthases from lichenized fungi DOI 10.1016/j.mycres.2007.08.020 Type Journal Article Author Muggia L Journal Mycological Research Pages 277-288