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Comparative Glycomics of Selected Nematodes

Comparative Glycomics of Selected Nematodes

Katharina Paschinger (ORCID: 0000-0002-3594-7136)
  • Grant DOI 10.55776/P21946
  • Funding program Principal Investigator Projects
  • Status ended
  • Start September 1, 2009
  • End August 31, 2015
  • Funding amount € 241,731
  • Project website

Disciplines

Biology (70%); Health Sciences (10%); Physics, Astronomy (20%)

Keywords

    Nematode, N-Glycan, Parasite, Oesophagostomum

Abstract Final report

Nematodes, unsegmented roundworms, have adapted to various ecological niches through millions of years of evolution. Many members of these organisms are parasites either of humans, vertebrates, invertebrates or plants whereas some nematode species have established a free-living lifestyle. Within the roundworm phylum, parasitism has evolved several times independently and now parasitic members can be found in four out of five clades. Oesophagostomum dentatum, the porcine nodular worm within clade V of the nematode phylum, will be the focus of this study as a model for the strongylids, important parasites of mammals and amongst the closest relatives of Caenorhabditis elegans. The parasite`s surface is adapted to resist the host`s immune system, preventing protective immunity of the host and is known to be a major source for glycoproteins. In this project, the N-glycan epitopes, decorations on the surface of proteins, will be analysed in terms of a differential presentation during the development of Oesophagostomum dentatum. The specific N-glycan epitopes of the invasive third (L3) and the parasitic fourth (L4) larval stages and their excretory/secretory products as well as the gender-specific epitope distribution of the gut-inhabiting adults will be examined in detail using immunochemical, chromatographic and mass spectrometric techniques. In comparison to its closely-related free-living relatives, such as the model organism Caenorhabditis elegans as well as Caenorhabditis briggsae, Caenorhabditis remanei, Caenorhabditis japonica and Pristionchus pacificus, epitopes supporting the parasitic life style will be defined. This study will constitute a basis for an improved understanding of the immunogenic and immunomodulatory glycans of nematodes.

Nematodes, unsegmented roundworms, have adapted to various ecological niches through millions of years of evolution. Many members of these organisms are parasites either of humans, vertebrates, invertebrates or plants whereas some nematode species have established a free-living lifestyle. Within the roundworm phylum, parasitism has evolved several times independently and now parasitic members can be found in four out of five clades. Oesophagostomum dentatum, the porcine nodular worm within clade V of the nematode phylum, was the focus of this study as a model for the strongylids, important parasites of mammals and amongst the closest relatives of Caenorhabditis elegans. The parasites surface is adapted to resist the hosts immune system, preventing protective immunity of the host and is known to be a major source for glycoproteins. In this project, the N-glycan epitopes, decorations on the surface of proteins, were analysed in terms of a differential presentation during the development of Oesophagostomum dentatum. The specific N-glycan epitopes of the invasive third (L3) and the parasitic fourth (L4) larval stages as well as the gender-specific epitope distribution of the gut-inhabiting adults were examined in detail using chromatographic and mass spectrometric techniques. In comparison to its closely-related free-living relatives, such as the model organism Caenorhabditis elegans and Pristionchus pacificus, as well as the parasite Trichuris suis various glycan epitopes were defined. This study therefore constitutes a basis for an improved understanding of the immunogenic and immunomodulatory glycans of nematodes.

Research institution(s)
  • Veterinärmedizinische Universität Wien - 10%
  • Universität für Bodenkultur Wien - 90%
Project participants
  • Anja Joachim, Veterinärmedizinische Universität Wien , associated research partner
International project participants
  • Markus Künzler, Eidgenössische Technische Hochschule Zürich - Switzerland

Research Output

  • 846 Citations
  • 28 Publications
Publications
  • 2019
    Title Anionic and zwitterionic moieties as widespread glycan modifications in non-vertebrates
    DOI 10.1007/s10719-019-09874-2
    Type Journal Article
    Author Paschinger K
    Journal Glycoconjugate Journal
    Pages 27-40
    Link Publication
  • 2019
    Title Comparisons of N-glycans across invertebrate phyla
    DOI 10.1017/s0031182019000398
    Type Journal Article
    Author Paschinger K
    Journal Parasitology
    Pages 1733-1742
    Link Publication
  • 2018
    Title Glycomics Studies on Nematodes Elucidate Conserved Functional Epitopes and Biosynthetic Pathways
    DOI 10.1096/fasebj.2018.32.1_supplement.673.17
    Type Journal Article
    Author Yan S
    Journal The FASEB Journal
    Pages 673.17-673.17
  • 2020
    Title Biochemical Characterization of Oyster and Clam Galectins: Selective Recognition of Carbohydrate Ligands on Host Hemocytes and Perkinsus Parasites
    DOI 10.3389/fchem.2020.00098
    Type Journal Article
    Author Vasta G
    Journal Frontiers in Chemistry
    Pages 98
    Link Publication
  • 2018
    Title Ablation of N-acetylglucosaminyltransferases in Caenorhabditis induces expression of unusual intersected and bisected N-glycans
    DOI 10.1016/j.bbagen.2018.07.002
    Type Journal Article
    Author Yan S
    Journal Biochimica et Biophysica Acta (BBA) - General Subjects
    Pages 2191-2203
    Link Publication
  • 2015
    Title Comparisons of Caenorhabditis Fucosyltransferase Mutants Reveal a Multiplicity of Isomeric N-Glycan Structures
    DOI 10.1021/acs.jproteome.5b00746
    Type Journal Article
    Author Yan S
    Journal Journal of Proteome Research
    Pages 5291-5305
    Link Publication
  • 2015
    Title Sweet secrets of a therapeutic worm: mass-spectrometric N-glycomic analysis of Trichuris suis
    DOI 10.1007/s00216-015-9154-8
    Type Journal Article
    Author Wilson I
    Journal Analytical and Bioanalytical Chemistry
    Pages 461-471
    Link Publication
  • 2015
    Title Comparison of RP-HPLC modes to analyse the N-glycome of the free-living nematode Pristionchus pacificus
    DOI 10.1002/elps.201400528
    Type Journal Article
    Author Yan S
    Journal ELECTROPHORESIS
    Pages 1314-1329
    Link Publication
  • 2015
    Title Two types of galactosylated fucose motifs are present on N-glycans of Haemonchus contortus
    DOI 10.1093/glycob/cwv015
    Type Journal Article
    Author Paschinger K
    Journal Glycobiology
    Pages 585-590
    Link Publication
  • 2016
    Title Structure and biosynthesis of complex N-glycan cores and antennae in nematodes
    DOI 10.1096/fasebj.30.1_supplement.843.4
    Type Journal Article
    Author Wilson I
    Journal The FASEB Journal
    Link Publication
  • 2016
    Title Gender and developmental specific N-glycomes of the porcine parasite Oesophagostomum dentatum
    DOI 10.1016/j.bbagen.2016.10.011
    Type Journal Article
    Author Jiménez-Castells C
    Journal Biochimica et Biophysica Acta (BBA) - General Subjects
    Pages 418-430
    Link Publication
  • 2016
    Title Analysis of zwitterionic and anionic N-linked glycans from invertebrates and protists by mass spectrometry
    DOI 10.1007/s10719-016-9650-x
    Type Journal Article
    Author Paschinger K
    Journal Glycoconjugate Journal
    Pages 273-283
    Link Publication
  • 2017
    Title Core Richness of N-Glycans of Caenorhabditis elegans: A Case Study on Chemical and Enzymatic Release
    DOI 10.1021/acs.analchem.7b03898
    Type Journal Article
    Author Yan S
    Journal Analytical Chemistry
    Pages 928-935
    Link Publication
  • 2015
    Title The fucomic potential of mosquitoes: Fucosylated N-glycan epitopes and their cognate fucosyltransferases
    DOI 10.1016/j.ibmb.2015.11.001
    Type Journal Article
    Author Kurz S
    Journal Insect Biochemistry and Molecular Biology
    Pages 52-63
    Link Publication
  • 2015
    Title Bisecting Galactose as a Feature of N-Glycans of Wild-type and Mutant Caenorhabditis elegans * [S]
    DOI 10.1074/mcp.m115.049817
    Type Journal Article
    Author Yan S
    Journal Molecular & Cellular Proteomics
    Pages 2111-2125
    Link Publication
  • 2015
    Title Targeted release and fractionation reveal glucuronylated and sulphated N- and O-glycans in larvae of dipteran insects
    DOI 10.1016/j.jprot.2015.05.030
    Type Journal Article
    Author Kurz S
    Journal Journal of Proteomics
    Pages 172-188
    Link Publication
  • 2014
    Title N-glycomic profiling of a glucosidase II mutant of Dictyostelium discoideum by ‘‘off-line’’ liquid chromatography and mass spectrometry
    DOI 10.1002/elps.201300612
    Type Journal Article
    Author Hykollari A
    Journal ELECTROPHORESIS
    Pages 2116-2129
    Link Publication
  • 2014
    Title Comparative Glycobiology
    DOI 10.1007/978-4-431-54836-2_153-1
    Type Book Chapter
    Author Paschinger K
    Publisher Springer Nature
    Pages 1-10
  • 2011
    Title Glycomarkers in parasitic infections and allergy
    DOI 10.1042/bst0390360
    Type Journal Article
    Author Hoffmann-Sommergruber K
    Journal Biochemical Society Transactions
    Pages 360-364
  • 2011
    Title The N-glycans of Trichomonas vaginalis contain variable core and antennal modifications
    DOI 10.1093/glycob/cwr149
    Type Journal Article
    Author Paschinger K
    Journal Glycobiology
    Pages 300-313
    Link Publication
  • 2013
    Title Hemocytes and Plasma of the Eastern Oyster (Crassostrea virginica) Display a Diverse Repertoire of Sulfated and Blood Group A-modified N-Glycans*
    DOI 10.1074/jbc.m113.478933
    Type Journal Article
    Author Kurz S
    Journal Journal of Biological Chemistry
    Pages 24410-24428
    Link Publication
  • 2014
    Title Comparative Glycobiology
    DOI 10.1007/978-4-431-54841-6_153
    Type Book Chapter
    Author Paschinger K
    Publisher Springer Nature
    Pages 795-805
  • 2013
    Title Array-assisted Characterization of a Fucosyltransferase Required for the Biosynthesis of Complex Core Modifications of Nematode N-Glycans*
    DOI 10.1074/jbc.m113.479147
    Type Journal Article
    Author Yan ?? S
    Journal Journal of Biological Chemistry
    Pages 21015-21028
    Link Publication
  • 2013
    Title Mass Spectrometric Analysis of Neutral and Anionic N-Glycans from a Dictyostelium discoideum Model for Human Congenital Disorder of Glycosylation CDG IL
    DOI 10.1021/pr300806b
    Type Journal Article
    Author Hykollari A
    Journal Journal of Proteome Research
    Pages 1173-1187
    Link Publication
  • 2012
    Title Mass spectrometric analysis of the immunodominant glycan epitope of Echinococcus granulosus antigen Ag5
    DOI 10.1016/j.ijpara.2012.01.002
    Type Journal Article
    Author Paschinger K
    Journal International Journal for Parasitology
    Pages 279-285
    Link Publication
  • 2012
    Title Galactosylated Fucose Epitopes in Nematodes INCREASED EXPRESSION IN A CAENORHABDITIS MUTANT ASSOCIATED WITH ALTERED LECTIN SENSITIVITY AND OCCURRENCE IN PARASITIC SPECIES*
    DOI 10.1074/jbc.m112.353128
    Type Journal Article
    Author Yan S
    Journal Journal of Biological Chemistry
    Pages 28276-28290
    Link Publication
  • 2012
    Title Complicated N-linked glycans in simple organisms
    DOI 10.1515/hsz-2012-0150
    Type Journal Article
    Author Schiller B
    Journal Biological chemistry
    Pages 661-673
    Link Publication
  • 2011
    Title Presence of galactosylated core fucose on N-glycans in the planaria Dugesia japonica
    DOI 10.1002/jms.1925
    Type Journal Article
    Author Paschinger K
    Journal Journal of Mass Spectrometry
    Pages 561-567
    Link Publication

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