Cross-diffusion in chemotaxis and tumor growth models
Cross-diffusion in chemotaxis and tumor growth models
Disciplines
Mathematics (100%)
Keywords
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Cross diffusion models,
Entropy estimates,
Nonlinear parabolic systems,
Existence of solutions,
Long-time behavior of solutions,
Numerical approximation
Cross-diffusion models are typically systems of strongly nonlinear equations in divergence form, whose diffusion matrix is nondiagonal. Such models naturally appear in, for instance, biology, chemistry, and physics in the study of multi-species systems. Cross diffusion may cause segregation of populations or granular materials, pattern formation in reaction-diffusion systems, or aggregation in chemotaxis models. In this project, we intend to analyze certain cross-diffusion models from biology describing chemotaxis or tumor growth. Our studies will include the well-posedness of the initial-boundary-value problems, the qualitative behavior of the solutions, and their numerical approximation. This project is not concerned with the modeling of the biological and chemical phenomena. Instead, the project is concerned with the understanding of the mathematical structure of cross-diffusion models and with the development of refined mathematical tools for their analysis. In the first part of the project, we will study cross-diffusion Keller-Segel-type models for chemotaxis. Chemotaxis is a biological phenomenon describing the change of motion of a population of species (amoebae, bacteria, cells etc.), which reacts in response to an external chemical stimulus spread in the environment of the population. A possible aggregation of the cells is reflected by the fact that the solutions to the multi-dimensional Keller-Segel model may blow up in finite time. We suggest a new extension of the parabolic-parabolic Keller-Segel model possessing weak solutions for all time and for any initial mass. The global existence result is based on new a priori estimates, which are a consequence of a characterization of more general cross-diffusion problems. We specify conditions under which such general problems possess a priori estimates, which we call entropy estimates. These conditions are related to the equivalence between the existence of a Lyapunov functional (mathematical entropy) for the system and the existence of a "symmetrizing" transformation of variables. Furthermore, the classical two-dimensional Keller-Segel model is numerically solved before and after blow up, employing a combination of a particle method (for the singular solution part) and a finite-element moving-mesh method (for the smooth part). In the second part of the project, we will analyze cross-diffusion tumor-growth models. Typically, the first stage of a tumor is the avascular growth (i.e. without blood vessels) which is mostly governed by the proliferation of tumor cells. We analyze two macroscopic avascular growth models from the literature: the model of Casciari et al. (1992), which is based on a drift-diffusion approach for the molar fluxes of the chemical species, and the model of Jackson and Byrne (2002), which describes the evolution of the volume fractions of the tumor cells and the extracellular matrix (i.e. the material surrounding the cells). The understanding of the mathematical structure of these cross- diffusion models is challenging since the diffusion matrices may be nonsymmetric and not positive definite. This problem will be overcome by suitable transformations of variables and corresponding entropy estimates. The objective is to prove the well-posedness of weak solutions and to develop mass-conserving and positivity- preserving numerical schemes.
The main aim of this project was the analysis of cross-diffusion models arising in biological applications like chemotaxis, tumor growth, and multicomponent fluids. Whereas diffusion is expected to smooth out the solution, cross diffusion may lead to a number of counterintuitive effects like up-hill diffusion and pattern formation. The mathematical difficulty is that the diffusion matrix of such systems often does not possess the properties needed for a mathematical analysis (symmetry, positive definiteness). The project was intended to contribute to the understanding of cross-diffusion effects. This goal has been achieved by exploiting a particular structure of the equations (called formal gradient-flow or entropy structure). Inspired by non-equilibrium thermodynamics, we have introduced so-called entropy variables which allow us to formulate the models in such a way that the diffusion matrix becomes (symmetric and) positive definite, hence overcoming the mathematical difficulties. Another advantage of this transformation is that it may be used to design stable numerical schemes which may be employed in biological applications.
- Technische Universität Wien - 100%
- Klemens Fellner, Universität Graz , national collaboration partner
- Benoît Perthame, Sorbonne Université - France
- Jean Dolbeault, Universite de Paris - Dauphine - France
- Norikazu Saito, University of Tokyo - Japan
- Jose Antonio Carrillo, The University of Oxford
Research Output
- 1003 Citations
- 86 Publications
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2014
Title Entropy dissipative one-leg multistep time approximations of nonlinear diffusive equations DOI 10.1002/num.21938 Type Journal Article Author Jüngel A Journal Numerical Methods for Partial Differential Equations Pages 1119-1149 Link Publication -
2014
Title An Asymptotic Limit of a Navier–Stokes System with Capillary Effects DOI 10.1007/s00220-014-1961-9 Type Journal Article Author Jüngel A Journal Communications in Mathematical Physics Pages 725-744 -
2015
Title Analysis of an Incompressible Navier–Stokes–Maxwell–Stefan System DOI 10.1007/s00220-015-2472-z Type Journal Article Author Chen X Journal Communications in Mathematical Physics Pages 471-497 Link Publication -
2015
Title Qualitative behavior of solutions to cross-diffusion systems from population dynamics DOI 10.48550/arxiv.1512.01038 Type Preprint Author Jüngel A -
2015
Title Global existence analysis for degenerate energy-transport models for semiconductors DOI 10.1016/j.jde.2014.12.007 Type Journal Article Author Zamponi N Journal Journal of Differential Equations Pages 2339-2363 Link Publication -
2015
Title A Degenerate Fourth-Order Parabolic Equation Modeling Bose-Einstein Condensation Part II: Finite-Time Blow-Up DOI 10.1080/03605302.2015.1043558 Type Journal Article Author Jüngel A Journal Communications in Partial Differential Equations Pages 1748-1786 Link Publication -
2017
Title A discrete Bakry-Emery method and its application to the porous-medium equation DOI 10.3934/dcds.2017241 Type Journal Article Author Jüngel A Journal Discrete and Continuous Dynamical Systems Pages 5541-5560 Link Publication -
2017
Title A discrete Bakry-Emery method and its application to the porous-medium equation DOI 10.48550/arxiv.1702.03780 Type Preprint Author Jüngel A -
2017
Title Global Existence Analysis of Cross-Diffusion Population Systems for Multiple Species DOI 10.1007/s00205-017-1172-6 Type Journal Article Author Chen X Journal Archive for Rational Mechanics and Analysis Pages 715-747 Link Publication -
2017
Title Uniform L $\infty$ estimates for approximate solutions of the bipolar drift-diffusion system DOI 10.48550/arxiv.1702.06300 Type Preprint Author Bessemoulin-Chatard M -
2017
Title Energy-transport models for spin transport in ferromagnetic semiconductors DOI 10.4310/cms.2017.v15.n6.a3 Type Journal Article Author Jüngel A Journal Communications in Mathematical Sciences Pages 1527-1563 Link Publication -
2017
Title A review for an isotropic Landau model DOI 10.48550/arxiv.1708.02097 Type Preprint Author Gualdani M -
2017
Title Global existence of weak even solutions for an isotropic Landau equation with Coulomb potential DOI 10.48550/arxiv.1708.02095 Type Preprint Author Gualdani M -
2015
Title A Degenerate Fourth-Order Parabolic Equation Modeling Bose–Einstein Condensation. Part I: Local Existence of Solutions DOI 10.1007/s00205-015-0847-0 Type Journal Article Author Jüngel A Journal Archive for Rational Mechanics and Analysis Pages 935-973 -
2015
Title Bounded weak solutions to a matrix drift–diffusion model for spin-coherent electron transport in semiconductors DOI 10.1142/s0218202515500232 Type Journal Article Author Jüngel A Journal Mathematical Models and Methods in Applied Sciences Pages 929-958 Link Publication -
2015
Title Entropy-dissipative discretization of nonlinear diffusion equations and discrete Beckner inequalities* DOI 10.1051/m2an/2015031 Type Journal Article Author Chainais-Hillairet C Journal ESAIM: Mathematical Modelling and Numerical Analysis Pages 135-162 Link Publication -
2020
Title Existence of weak solutions to a continuity equation with space time nonlocal Darcy law DOI 10.1080/03605302.2020.1814325 Type Journal Article Author Caffarelli L Journal Communications in Partial Differential Equations Pages 1799-1819 Link Publication -
2019
Title Global existence for a two-phase flow model with cross diffusion DOI 10.48550/arxiv.1901.07296 Type Preprint Author Daus E -
2019
Title Analysis of a Degenerate and Singular Volume-Filling Cross-Diffusion System Modeling Biofilm Growth DOI 10.1137/18m1185806 Type Journal Article Author Daus E Journal SIAM Journal on Mathematical Analysis Pages 3569-3605 Link Publication -
2018
Title Displacement convexity for the entropy in semi-discrete non-linear Fokker–Planck equations DOI 10.1017/s0956792517000389 Type Journal Article Author Carrillo J Journal European Journal of Applied Mathematics Pages 1103-1122 Link Publication -
2017
Title Existence Analysis for Incompressible Fluid Model of Electrically Charged Chemically Reacting and Heat Conducting Mixtures DOI 10.1137/16m110931x Type Journal Article Author Bulc?Ek M Journal SIAM Journal on Mathematical Analysis Pages 3776-3830 Link Publication -
2017
Title A cross-diffusion system derived from a Fokker–Planck equation with partial averaging DOI 10.1007/s00033-017-0772-1 Type Journal Article Author Jüngel A Journal Zeitschrift für angewandte Mathematik und Physik Pages 28 Link Publication -
2017
Title Uniform Estimates for Approximate Solutions of the Bipolar Drift-Diffusion System DOI 10.1007/978-3-319-57397-7_31 Type Book Chapter Author Bessemoulin-Chatard M Publisher Springer Nature Pages 381-389 -
2017
Title A kinetic equation for economic value estimation with irrationality and herding DOI 10.3934/krm.2017010 Type Journal Article Author Düring B Journal Kinetic and Related Models Pages 239-261 Link Publication -
2018
Title A Review for an Isotropic Landau Model DOI 10.1007/978-3-030-01947-1_6 Type Book Chapter Author Gualdani M Publisher Springer Nature Pages 115-144 -
2018
Title Existence Analysis of a Single-Phase Flow Mixture with van der Waals Pressure DOI 10.1137/16m1107024 Type Journal Article Author Ju¨Ngel A Journal SIAM Journal on Mathematical Analysis Pages 1367-1395 -
2018
Title Analysis of a degenerate and singular volume-filling cross-diffusion system modeling biofilm growth DOI 10.48550/arxiv.1805.02106 Type Preprint Author Daus E -
2018
Title Longtime behavior and weak-strong uniqueness for a nonlocal porous media equation DOI 10.48550/arxiv.1812.07326 Type Preprint Author Daus E -
2018
Title Global Existence of Weak Even Solutions for an Isotropic Landau Equation with Coulomb Potential DOI 10.1137/17m1142685 Type Journal Article Author Gualdani M Journal SIAM Journal on Mathematical Analysis Pages 3676-3714 Link Publication -
2011
Title Lyapunov functionals, weak sequential stability, and uniqueness analysis for energy-transport systems DOI 10.1007/s11565-011-0136-2 Type Journal Article Author Jüngel A Journal ANNALI DELL'UNIVERSITA' DI FERRARA Pages 89-100 -
2011
Title On the Feasibility of Spherical Harmonics Expansions of the Boltzmann Transport Equation for Three-Dimensional Device Geometries DOI 10.1109/iedm.2011.6131667 Type Conference Proceeding Abstract Author Rupp K Pages 34.1.1-34.1.4 -
2020
Title Global existence for a two-phase flow model with cross-diffusion DOI 10.3934/dcdsb.2019198 Type Journal Article Author Daus E Journal Discrete and Continuous Dynamical Systems - B Pages 957-979 Link Publication -
2020
Title Longtime behavior and weak-strong uniqueness for a nonlocal porous media equation DOI 10.1016/j.jde.2019.09.029 Type Journal Article Author Daus E Journal Journal of Differential Equations Pages 1820-1839 Link Publication -
2016
Title A meeting point of entropy and bifurcations in cross-diffusion herding†DOI 10.1017/s0956792516000346 Type Journal Article Author Jüngel A Journal European Journal of Applied Mathematics Pages 317-356 Link Publication -
2016
Title Qualitative behavior of solutions to cross-diffusion systems from population dynamics DOI 10.1016/j.jmaa.2016.03.076 Type Journal Article Author Jüngel A Journal Journal of Mathematical Analysis and Applications Pages 794-809 Link Publication -
2015
Title A meeting point of entropy and bifurcations in cross-diffusion herding DOI 10.48550/arxiv.1504.07555 Type Preprint Author Jüngel A -
2015
Title The boundedness-by-entropy method for cross-diffusion systems DOI 10.1088/0951-7715/28/6/1963 Type Journal Article Author Jüngel A Journal Nonlinearity Pages 1963-2001 Link Publication -
2012
Title Compact families of piecewise constant functions in Lp(0,T;B) DOI 10.1016/j.na.2011.12.004 Type Journal Article Author Dreher M Journal Nonlinear Analysis: Theory, Methods & Applications Pages 3072-3077 -
2012
Title CROSS DIFFUSION AND NONLINEAR DIFFUSION PREVENTING BLOW UP IN THE KELLER–SEGEL MODEL DOI 10.1142/s0218202512500418 Type Journal Article Author Carrillo J Journal Mathematical Models and Methods in Applied Sciences Pages 1250041 Link Publication -
2012
Title ENTROPY STRUCTURE OF A CROSS-DIFFUSION TUMOR-GROWTH MODEL DOI 10.1142/s0218202512500091 Type Journal Article Author Jüngel A Journal Mathematical Models and Methods in Applied Sciences Pages 1250009 -
2012
Title Transient Schrödinger-Poisson Simulations of a High-Frequency Resonant Tunneling Diode Oscillator DOI 10.48550/arxiv.1211.0821 Type Preprint Author Mennemann J -
2012
Title Stable blow up dynamics for energy supercritical wave equations DOI 10.48550/arxiv.1207.7046 Type Preprint Author Donninger R -
2012
Title Existence analysis for a simplified transient energy-transport model for semiconductors DOI 10.1002/mma.2715 Type Journal Article Author Jüngel A Journal Mathematical Methods in the Applied Sciences Pages 1701-1712 Link Publication -
2012
Title Flatness-based planning for semilinear parabolic PDEs. Type Conference Proceeding Abstract Author Jüngel A Et Al -
2012
Title Stable self-similar blow up for energy subcritical wave equations DOI 10.48550/arxiv.1201.4337 Type Preprint Author Donninger R -
2012
Title Existence analysis for a simplified transient energy-transport model for semiconductors DOI 10.48550/arxiv.1206.5722 Type Preprint Author Jüngel A -
2012
Title Entropy-stable and entropy-dissipative approximations of a fourth-order quantum diffusion equation DOI 10.48550/arxiv.1208.5474 Type Preprint Author Bukal M -
2012
Title Flatness-based trajectory planning for semilinear parabolic PDEs DOI 10.1109/cdc.2012.6426310 Type Conference Proceeding Abstract Author Schörkhuber B Pages 3538-3543 -
2012
Title Stable self-similar blow up for energy subcritical wave equations DOI 10.4310/dpde.2012.v9.n1.a3 Type Journal Article Author Donninger R Journal Dynamics of Partial Differential Equations Pages 63-87 Link Publication -
2012
Title A finite volume scheme for a Keller-Segel model with additional cross-diffusion DOI 10.48550/arxiv.1208.0309 Type Preprint Author Bessemoulin-Chatard M -
2012
Title Existence analysis of Maxwell-Stefan systems for multicomponent mixtures DOI 10.48550/arxiv.1211.2394 Type Preprint Author Jüngel A -
2019
Title Two spinorial drift-diffusion models for quantum electron transport in graphene DOI 10.48550/arxiv.1905.10186 Type Preprint Author Zamponi N -
2013
Title Flatness of Semilinear Parabolic PDEs—A Generalized Cauchy–Kowalevski Approach DOI 10.1109/tac.2013.2256013 Type Journal Article Author Schorkhuber B Journal IEEE Transactions on Automatic Control Pages 2277-2291 Link Publication -
2013
Title Stable blow up dynamics for energy supercritical wave equations DOI 10.1090/s0002-9947-2013-06038-2 Type Journal Article Author Donninger R Journal Transactions of the American Mathematical Society Pages 2167-2189 Link Publication -
2013
Title A finite volume scheme for a Keller–Segel model with additional cross-diffusion DOI 10.1093/imanum/drs061 Type Journal Article Author Bessemoulin-Chatard M Journal Ima Journal of Numerical Analysis Pages 96-122 Link Publication -
2013
Title Existence Analysis of Maxwell--Stefan Systems for Multicomponent Mixtures DOI 10.1137/120898164 Type Journal Article Author Ju¨Ngel A Journal SIAM Journal on Mathematical Analysis Pages 2421-2440 Link Publication -
2013
Title Entropy dissipative one-leg multistep time approximations of nonlinear diffusive equations DOI 10.48550/arxiv.1311.7540 Type Preprint Author Jüngel A -
2013
Title An asymptotic limit of a Navier-Stokes system with capillary effects DOI 10.48550/arxiv.1302.1299 Type Preprint Author Jüngel A -
2013
Title A note on Aubin-Lions-Dubinskii lemmas DOI 10.48550/arxiv.1305.6235 Type Preprint Author Chen X -
2013
Title Entropy-dissipative discretization of nonlinear diffusion equations and discrete Beckner inequalities DOI 10.48550/arxiv.1303.3791 Type Preprint Author Chainais-Hillairet C -
2013
Title Perfectly Matched Layers versus discrete transparent boundary conditions in quantum device simulations DOI 10.48550/arxiv.1312.1565 Type Preprint Author Mennemann J -
2013
Title Bounded weak solutions to matrix drift-diffusion model for spin-coherent electron transport in semiconductors DOI 10.48550/arxiv.1312.2461 Type Preprint Author Jüngel A -
2014
Title Boundedness of weak solutions to cross-diffusion systems from population dynamics DOI 10.48550/arxiv.1404.6054 Type Preprint Author Jüngel A -
2014
Title The boundedness-by-entropy principle for cross-diffusion systems DOI 10.48550/arxiv.1403.5419 Type Preprint Author Jüngel A -
2014
Title A degenerate fourth-order parabolic equation modeling Bose-Einstein condensation. Part II: Finite-time blow-up DOI 10.48550/arxiv.1401.0911 Type Preprint Author Jüngel A -
2014
Title A degenerate fourth-order parabolic equation modeling Bose-Einstein condensation. Part I: Local existence of solutions DOI 10.48550/arxiv.1401.0910 Type Preprint Author Jüngel A -
2014
Title Analysis of a drift–diffusion model with velocity saturation for spin-polarized transport in semiconductors DOI 10.1016/j.jmaa.2014.06.065 Type Journal Article Author Zamponi N Journal Journal of Mathematical Analysis and Applications Pages 1167-1181 Link Publication -
2014
Title Perfectly Matched Layers versus discrete transparent boundary conditions in quantum device simulations DOI 10.1016/j.jcp.2014.06.049 Type Journal Article Author Mennemann J Journal Journal of Computational Physics Pages 1-24 Link Publication -
2013
Title Entropy-stable and entropy-dissipative approximations of a fourth-order quantum diffusion equation DOI 10.1007/s00211-013-0588-7 Type Journal Article Author Bukal M Journal Numerische Mathematik Pages 365-396 -
2013
Title A multidimensional nonlinear sixth-order quantum diffusion equation DOI 10.1016/j.anihpc.2012.08.003 Type Journal Article Author Bukal M Journal Annales de l'Institut Henri Poincare (C) Non Linear Analysis Pages 337-365 Link Publication -
2013
Title A Note on Aubin-Lions-Dubinskii Lemmas DOI 10.1007/s10440-013-9858-8 Type Journal Article Author Chen X Journal Acta Applicandae Mathematicae Pages 33-43 Link Publication -
2011
Title A New Derivation of the Quantum Navier–Stokes Equations in the Wigner–Fokker–Planck Approach DOI 10.1007/s10955-011-0388-3 Type Journal Article Author Jüngel A Journal Journal of Statistical Physics Pages 1661-1673 -
2011
Title Cross diffusion and nonlinear diffusion preventing blow up in the Keller-Segel model DOI 10.48550/arxiv.1110.3525 Type Preprint Author Carrillo J -
2011
Title Entropies for radially symmetric higher-order nonlinear diffusion equations DOI 10.4310/cms.2011.v9.n2.a2 Type Journal Article Author Bukal M Journal Communications in Mathematical Sciences Pages 353-382 Link Publication -
2011
Title Cross Diffusion Preventing Blow-Up in the Two-Dimensional KellerSegel Model DOI 10.1137/100813191 Type Journal Article Author Hittmeir S Journal SIAM Journal on Mathematical Analysis Pages 997-1022 -
2013
Title Two spinorial drift-diffusion models for quantum electron transport in graphene DOI 10.4310/cms.2013.v11.n3.a7 Type Journal Article Author Jüngel A Journal Communications in Mathematical Sciences Pages 807-830 Link Publication -
2013
Title Transient Schrödinger–Poisson simulations of a high-frequency resonant tunneling diode oscillator DOI 10.1016/j.jcp.2012.12.009 Type Journal Article Author Mennemann J Journal Journal of Computational Physics Pages 187-205 Link Publication -
2013
Title Global existence analysis for degenerate energy-transport models for semiconductors DOI 10.48550/arxiv.1310.3377 Type Preprint Author Zamponi N -
2013
Title Analysis of an incompressible Navier-Stokes-Maxwell-Stefan system DOI 10.48550/arxiv.1310.3376 Type Preprint Author Chen X -
2016
Title Displacement convexity for the entropy in semidiscrete nonlinear Fokker-Planck equations DOI 10.48550/arxiv.1611.04716 Type Preprint Author Carrillo J -
2016
Title A kinetic equation for economic value estimation with irrationality and herding DOI 10.48550/arxiv.1601.03244 Type Preprint Author Düring B -
2016
Title A cross-diffusion system derived from a Fokker-Planck equation with partial averaging DOI 10.48550/arxiv.1601.05039 Type Preprint Author Jüngel A -
2016
Title Existence analysis of a single-phase flow mixture model with van der Waals pressure DOI 10.48550/arxiv.1612.04161 Type Preprint Author Jüngel A -
2016
Title Existence analysis for incompressible fluid model of electrically charged chemically reacting and heat conducting mixtures DOI 10.48550/arxiv.1612.08120 Type Preprint Author BulÃcek M -
2016
Title Energy-transport models for spin transport in ferromagnetic semiconductors DOI 10.48550/arxiv.1604.05480 Type Preprint Author Jüngel A -
2016
Title Global existence analysis of cross-diffusion population systems for multiple species DOI 10.48550/arxiv.1608.03696 Type Preprint Author Chen X