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MORN repeat proteins and the Trypanosoma brucei bilobe

MORN repeat proteins and the Trypanosoma brucei bilobe

Graham Warren (ORCID: )
  • Grant DOI 10.55776/P22276
  • Funding program Principal Investigator Projects
  • Status ended
  • Start February 1, 2010
  • End February 28, 2013
  • Funding amount € 374,566
  • Project website

Disciplines

Biology (80%); Chemistry (20%)

Keywords

    Golgi, T. brucei, Biogenesis, Bilobe, Three-dimensional structure, MORN repeat protein

Abstract Final report

The protist parasite Trypanosoma brucei, causative agent of African sleeping sickness in man and Nagana in cattle, is an early-branching Eukaryote of fundamental biological interest. We have identified a novel cytoskeletal structure in this organism with a bilobed morphology demarcated by TbCentrins 2 and 4. Centrins are small proteins belonging to the EF-hand superfamily and are highly conserved components of the microtubule organizing centers of Eukaryotic cells. This proposal focuses on a novel component of the bilobe, TbMORN1, which we recently discovered. TbMORN1 is composed of 15 tandem 23-amino acid MORN repeats, which are found throughout the tree of life but whose function is still unclear. It is thought that they are used as protein-protein or protein-lipid interaction domains. TbMORN1 is localized exclusively to the bilobe structure, unlike the TbCentrins which are also present at the basal body and other cytoskeletal architectures. TbMORN1 is also essential for the viability of the bloodstream form of the parasite. Using targeted depletion by RNAi we intend to gain a greater understanding of the biological function of TbMORN1. We also aim to identify other bilobe components by identifying its intracellular binding partners, and gain insight into its mechanism of operation through high resolution structural studies.

This project has led to a major advance in our understanding of a human parasite. The parasite in question is Trypanosoma brucei, a single-celled organism that causes the neglected tropical disease human African trypanosomiasis (HAT, colloquially known as Sleeping Sickness). T. brucei has a two-stage life cycle, alternating between the tsetse fly and mammalian hosts. There is an urgent need for new drugs against T. brucei owing to limited number of options and high toxicity. One of the problems with finding new drug targets against T. brucei is that it is a eukaryote (meaning that its genetic material is enclosed within a nucleus). Humans are also eukaryotes, so it is much more difficult to find a drug which kills T. brucei that is not also toxic to us. This is very different from the situation with prokaryotes (bacteria), which are sufficiently different that antibiotics can be safely used against them.Like all eukaryotic cells, T. brucei has an internal architecture - the cytoskeleton. Numerous studies have shown that the cytoskeleton of T. brucei is essential to its viability and pathogenicity. The work undertaken in this project focused on a newly-discovered component of the T. brucei cytoskeleton called the bilobe. When the project began, only one protein was known to be exclusively present at the bilobe - TbMORN1.By specifically depleting TbMORN1 from cells, it was shown that the bilobe is essential for the viability of the mammalian-infective form of T. brucei. A combination of fluorescence microscopy and electron microscopy was used to study the bilobe at high resolution, which led to a new model for its morphology. By applying a new technique called proximity-dependent biotin identification (BioID), a total of seven new bilobe proteins were identified in T. brucei. This also allowed the delineation of a number of subdomains within the bilobe structure. Finally, the TbMORN1 protein was studied in vitro in order to generate an atomic-resolution structural model using several biochemical and biophysical methods.

Research institution(s)
  • Universität Wien - 100%
International project participants
  • Dmitri I. Svergun, European Molecular Biology Laboratory Hamburg - Germany
  • Markus Engstler, Technische Universität Darmstadt - Germany
  • Cynthia He, National University of Singapore - Singapore
  • Gregor Anderluh, National Institute of Chemistry - Slovenia
  • Elisabetta Ullu, Yale University - USA

Research Output

  • 1097 Citations
  • 31 Publications
Publications
  • 2012
    Title Morphology of the Trypanosome Bilobe, a Novel Cytoskeletal Structure
    DOI 10.1128/ec.05287-11
    Type Journal Article
    Author Esson H
    Journal Eukaryotic Cell
    Pages 761-772
    Link Publication
  • 2019
    Title HspB1 phosphorylation regulates its intramolecular dynamics and mechanosensitive molecular chaperone interaction with filamin C
    DOI 10.1126/sciadv.aav8421
    Type Journal Article
    Author Collier M
    Journal Science Advances
    Link Publication
  • 2018
    Title Phosphorylation of HspB1 regulates its mechanosensitive molecular chaperone interaction with native filamin C
    DOI 10.1101/325712
    Type Preprint
    Author Collier M
    Pages 325712
    Link Publication
  • 2016
    Title Structure and calcium-binding studies of calmodulin-like domain of human non-muscle a-actinin-1
    DOI 10.1038/srep27383
    Type Journal Article
    Author Drmota Prebil S
    Journal Scientific Reports
    Pages 27383
    Link Publication
  • 2014
    Title Manipulating Conserved Heme Cavity Residues of Chlorite Dismutase: Effect on Structure, Redox Chemistry, and Reactivity
    DOI 10.1021/bi401042z
    Type Journal Article
    Author Hofbauer S
    Journal Biochemistry
    Pages 77-89
    Link Publication
  • 2012
    Title Novel Bilobe Components in Trypanosoma brucei Identified Using Proximity-Dependent Biotinylation
    DOI 10.1128/ec.00326-12
    Type Journal Article
    Author Morriswood B
    Journal Eukaryotic Cell
    Pages 356-367
    Link Publication
  • 2021
    Title Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with a-actinin
    DOI 10.1126/sciadv.abg7653
    Type Journal Article
    Author Sponga A
    Journal Science Advances
    Link Publication
  • 2021
    Title FLNC-Associated Myofibrillar Myopathy
    DOI 10.1212/nxg.0000000000000590
    Type Journal Article
    Author Kley R
    Journal Neurology: Genetics
    Link Publication
  • 2021
    Title Molecular basis of F-actin regulation and sarcomere assembly via myotilin
    DOI 10.1371/journal.pbio.3001148
    Type Journal Article
    Author Kostan J
    Journal PLOS Biology
    Link Publication
  • 2023
    Title Unlocking Predictive Power: A Machine Learning Tool Derived from In-Depth Analysis to Forecast the Impact of Missense Variants in Human Filamin C
    DOI 10.1101/2023.08.05.552086
    Type Preprint
    Author Nagy M
    Pages 2023.08.05.552086
    Link Publication
  • 2020
    Title In-depth interrogation of protein thermal unfolding data with MoltenProt
    DOI 10.1002/pro.3986
    Type Journal Article
    Author Kotov V
    Journal Protein Science
    Pages 201-217
    Link Publication
  • 2020
    Title X-ray–induced photoreduction of heme metal centers rapidly induces active-site perturbations in a protein-independent manner
    DOI 10.1074/jbc.ra120.014087
    Type Journal Article
    Author Pfanzagl V
    Journal Journal of Biological Chemistry
    Pages 13488-13501
    Link Publication
  • 2020
    Title Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats
    DOI 10.1371/journal.pone.0242677
    Type Journal Article
    Author Sajko S
    Journal PLOS ONE
    Link Publication
  • 2022
    Title A Potential Citrate Shunt in Erythrocytes of PKAN Patients Caused by Mutations in Pantothenate Kinase 2
    DOI 10.3390/biom12020325
    Type Journal Article
    Author Werning M
    Journal Biomolecules
    Pages 325
    Link Publication
  • 2019
    Title Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats
    DOI 10.1101/826180
    Type Preprint
    Author Sajko S
    Pages 826180
    Link Publication
  • 2020
    Title PHF3 regulates neuronal gene expression through the new Pol II CTD reader domain SPOC
    DOI 10.1101/2020.02.11.943159
    Type Preprint
    Author Appel L
    Pages 2020.02.11.943159
    Link Publication
  • 2021
    Title PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
    DOI 10.1038/s41467-021-26360-2
    Type Journal Article
    Author Appel L
    Journal Nature Communications
    Pages 6078
    Link Publication
  • 2017
    Title Conformational plasticity and evolutionary analysis of the myotilin tandem Ig domains
    DOI 10.1038/s41598-017-03323-6
    Type Journal Article
    Author Puž V
    Journal Scientific Reports
    Pages 3993
    Link Publication
  • 2017
    Title Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies
    DOI 10.1021/acscatal.7b01749
    Type Journal Article
    Author Schaffner I
    Journal ACS Catalysis
    Pages 7962-7976
    Link Publication
  • 2014
    Title Direct interaction of actin filaments with F-BAR protein pacsin2
    DOI 10.15252/embr.201439267
    Type Journal Article
    Author Kostan J
    Journal The EMBO Reports
    Pages 1154-1162
    Link Publication
  • 2014
    Title The Structure and Regulation of Human Muscle a-Actinin
    DOI 10.1016/j.cell.2014.10.056
    Type Journal Article
    Author De Almeida Ribeiro E
    Journal Cell
    Pages 1447-1460
    Link Publication
  • 2014
    Title Transiently Produced Hypochlorite Is Responsible for the Irreversible Inhibition of Chlorite Dismutase
    DOI 10.1021/bi500401k
    Type Journal Article
    Author Hofbauer S
    Journal Biochemistry
    Pages 3145-3157
    Link Publication
  • 2017
    Title a-Actinin/titin interaction: A dynamic and mechanically stable cluster of bonds in the muscle Z-disk
    DOI 10.1073/pnas.1612681114
    Type Journal Article
    Author Grison M
    Journal Proceedings of the National Academy of Sciences
    Pages 1015-1020
    Link Publication
  • 2017
    Title Deciphering the BAR code of membrane modulators
    DOI 10.1007/s00018-017-2478-0
    Type Journal Article
    Author Salzer U
    Journal Cellular and Molecular Life Sciences
    Pages 2413-2438
    Link Publication
  • 2015
    Title Dimeric chlorite dismutase from the nitrogen-fixing cyanobacterium Cyanothece sp. PCC7425
    DOI 10.1111/mmi.12989
    Type Journal Article
    Author Schaffner I
    Journal Molecular Microbiology
    Pages 1053-1068
    Link Publication
  • 2020
    Title Calcium modulates the domain flexibility and function of an a-actinin similar to the ancestral a-actinin
    DOI 10.1073/pnas.1917269117
    Type Journal Article
    Author Pinotsis N
    Journal Proceedings of the National Academy of Sciences
    Pages 22101-22112
    Link Publication
  • 2020
    Title Molecular basis of F-actin regulation and sarcomere assembly via myotilin
    DOI 10.1101/2020.09.25.310029
    Type Preprint
    Author Kostan J
    Pages 2020.09.25.310029
    Link Publication
  • 2015
    Title Structure and heme-binding properties of HemQ (chlorite dismutase-like protein) from Listeria monocytogenes
    DOI 10.1016/j.abb.2015.01.010
    Type Journal Article
    Author Hofbauer S
    Journal Archives of Biochemistry and Biophysics
    Pages 36-48
    Link Publication
  • 2015
    Title Structural Insights into Ca2+-Calmodulin Regulation of Plectin 1a-Integrin ß4 Interaction in Hemidesmosomes
    DOI 10.1016/j.str.2015.01.011
    Type Journal Article
    Author Song J
    Journal Structure
    Pages 558-570
    Link Publication
  • 2016
    Title Congenital macrothrombocytopenia-linked mutations in the actin-binding domain of a-actinin-1 enhance F-actin association
    DOI 10.1002/1873-3468.12101
    Type Journal Article
    Author Murphy A
    Journal FEBS Letters
    Pages 685-695
    Link Publication
  • 2016
    Title The structure and DNA-binding properties of Mgm101 from a yeast with a linear mitochondrial genome
    DOI 10.1093/nar/gkv1529
    Type Journal Article
    Author Pevala V
    Journal Nucleic Acids Research
    Pages 2227-2239
    Link Publication

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