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Mathematical modeling of trace gas exhalation kinetics

Mathematical modeling of trace gas exhalation kinetics

Karl Unterkofler (ORCID: )
  • Grant DOI 10.55776/P24736
  • Funding program Principal Investigator Projects
  • Status ended
  • Start July 1, 2012
  • End December 31, 2015
  • Funding amount € 359,263

Disciplines

Mathematics (100%)

Keywords

    Mathematical Modeling, Breath Gas Analysis, PTR-MS, VOC, Blood-Gas Kinetics, Isoprene, Acetone

Abstract Final report

Due to its broad scope and applicability, breath gas analysis holds great promise as a versatile framework for general bio-monitoring applications and diagnostics. While sufficiently accurate and fast instrumental techniques are vital for fully exploiting this huge potential, also several methodological issues need to be addressed before breath gas analysis can become the ``new blood test``. Specifically, a crucial yet underestimated aspect of breath gas analysis concerns the blood-gas kinetics of the VOCs under scrutiny as well as their systemic distribution and physiological flow within the human body. The concentrations of blood-borne VOCs in exhaled breath are primarily influenced by: breathing patterns and pulmonary blood flow, affecting gas exchange in the alveolar space diffusion mechanisms in the conducting airways the systemic concentrations of the compound, governed by endogenous production, metabolism, and distribution. In two recent papers1,2 we have developed two mathematical models for the breath behavior of two specific VOCs, i.e., acetone and isoprene. Due to the fact that these substances reflect a relatively wide spectrum of distinct physico-chemical characteristics, the results we have obtained so far are an excellent starting point for extending the quantitative knowledge of VOC exhalation kinetics to a wider range of experimental scenarios as well as to other classes of endogenous and exogenously administered trace gases. Within the proposed project we suggest to extend the 3-compartment model for isoprene into a more detailed pharmacokinetic compartment model including, e.g., the lungs, liver, fat, richly perfused tissue, resting muscles, and working muscles. Together with the accompanying experimental investigations this is expected to provide further insights into the novel hypothesis that a peripheral (muscle) tissue group acts as an explicit extrahepatic production site of isoprene in the body, thus indicating a new metabolic pathway for this most abundant hydrocarbon in human breath. Finally, this model will be combined with our existing acetone model yielding a unified model which is intended to serve as a general mechanistic basis for quantitative VOC analyses (e.g., the estimation of endogenous production and metabolism rates or the reconstruction of blood and tissue concentrations from observable breath levels). Particularly, as a prototypic test case within a realistic clinical setting we shall apply the proposed model for real- time assessments of the anesthetic state on the basis of exhaled breath measurements. The work packages embrace several theoretical and experimental investigations for achieving this goal. Our mathematical simulation models are based on the causal physical laws of mass balance differential equations. The mathematical methods employed for that purpose include, e.g., identifiability/observability, Hermann-Krener rank criterion, multiple shooting, and sensitivity analysis. J. King, H. Koc, K. Unterkofler, P. Mochalski, A. Kupferthaler, G. Teschl, S. Teschl, H. Hinterhuber, and A. Amann: Physiological modeling of isoprene dynamics in exhaled breath, J. Theoret. Biol. 267 (2010) 626-637. J. King, K. Unterkofler, G. Teschl, S. Teschl, H. Koc, H. Hinterhuber, and A. Amann, A mathematical model for breath gas analysis of volatile organic compounds with special emphasis on acetone, J. Math. Biol 63 (2011), 959- 999.

Endogenous volatile organic compounds (VOCs) are released within the human organism either as a result of normal metabolic activity or due to pathological disorders. They enter the blood stream and are eventually metabolized or excreted via exhalation, skin emission, urine, etc. Breath sampling presents a golden opportunity for a non-invasive means of extracting information on these topics. Other advantages lie in the possibility to extract breath samples as often as desired, and in the fact that exhalation can be measured in real time, even in breath-to-breath resolution. All together, these factors render breath analysis to be an ideal choice for the purpose of obtaining ongoing information on the current metabolic and physiological state of an individual.In that process, the identification and quantification of potential disease biomarkers serve as the driving force in that analysis of exhaled breath. Moreover, future applications for medical diagnosis and therapy control with dynamic assessments of normal physiological function or pharmacodynamics are intended. Exogenous VOCs, substances that penetrate the body as a result of environmental exposure, furthermore, can be ultimately utilized to quantify body burden. Finally, breath tests are often based on the ingestion of isotopically labeled precursors, producing isotopically labeled carbon dioxide as well as the possibility of many other labeled metabolites.Yet, due to a whole host of confounding factors biasing the concentrations of volatiles in the breath, breath sampling currently stands far-removed from the ranks of standardized procedure. These factors are related to both the breath sampling protocols as well as to the complex physiological mechanisms underlying pulmonary gas exchange. Even under resting conditions, exhaled breath concentrations of VOCs can strongly be influenced by specific physiological parameters such as cardiac output and breathing patterns, depending on the physico-chemical properties of the compound under study. Understanding the influence of all these factors and harnessing their control are therefore central to achieving an accurate standardization of breath sample collection and for the correct deduction of the corresponding blood concentration levels, and ultimately paving the way for the routinization of breath sampling.In this project we developed new and extended our previously developed models and verified them experimentally. These models allow the determination of blood concentrations from their breath concentration. In addition they enable to calculate production rates and metabolic rates from breath concentration.Furthermore, in a series of investigations the knowledge on the human volatilome was extended:(i) An investigation of blood and breath volatiles quantified altogether 74 compounds occurring in both types of samples.(ii) By measuring emissions of volatile organic compounds from skin we created a databank of human-borne volatiles having a high potential as markers of human presence, which could be used for early location of entrapped victims in rescue operations during earthquakes.(iii) Finally, assessment, origin, and implementation of breath volatile cancer markers were investigated.A total of 25 articles were published in journals with high impact factors.

Research institution(s)
  • FH Vorarlberg - 49%
  • Universität Innsbruck - 51%
Project participants
  • Karl Unterkofler, FH Vorarlberg , associated research partner
International project participants
  • Wolfram Miekisch, Universität Rostock - Germany
  • Gunnar Johanson, Karolinska Institutet - Sweden

Research Output

  • 2317 Citations
  • 33 Publications
Publications
  • 2019
    Title PTR-MS studies of the reactions of H3O+ with a number of deuterated volatile organic compounds and the subsequent sequential reactions of the primary product ions with water under normal and humid drift tube conditions: Implications for use of deuter
    DOI 10.1016/j.ijms.2018.11.007
    Type Journal Article
    Author Mochalski P
    Journal International Journal of Mass Spectrometry
    Pages 65-70
    Link Publication
  • 2018
    Title Ex vivo emission of volatile organic compounds from gastric cancer and non-cancerous tissue
    DOI 10.1088/1752-7163/aacbfb
    Type Journal Article
    Author Mochalski P
    Journal Journal of Breath Research
    Pages 046005
    Link Publication
  • 2016
    Title Prediction of blood:air and fat:air partition coefficients of volatile organic compounds for the interpretation of data in breath gas analysisDedicated to the memory of our friend, colleague, and mentor Anton Amann.
    DOI 10.1088/1752-7155/10/1/017103
    Type Journal Article
    Author Kramer C
    Journal Journal of Breath Research
    Pages 017103
    Link Publication
  • 2015
    Title Potential of volatile organic compounds as markers of entrapped humans for use in urban search-and-rescue operations
    DOI 10.1016/j.trac.2015.02.013
    Type Journal Article
    Author Mochalski P
    Journal TrAC Trends in Analytical Chemistry
    Pages 88-106
    Link Publication
  • 2015
    Title Exhaled methane concentration profiles during exercise on an ergometer
    DOI 10.1088/1752-7155/9/1/016009
    Type Journal Article
    Author Szabó A
    Journal Journal of Breath Research
    Pages 016009
    Link Publication
  • 2015
    Title Modeling-based determination of physiological parameters of systemic VOCs by breath gas analysis: a pilot study
    DOI 10.1088/1752-7155/9/3/036002
    Type Journal Article
    Author Unterkofler K
    Journal Journal of Breath Research
    Pages 036002
    Link Publication
  • 2019
    Title Non-contact breath sampling for sensor-based breath analysis
    DOI 10.1088/1752-7163/ab0b8d
    Type Journal Article
    Author Mochalski P
    Journal Journal of Breath Research
    Pages 036001
    Link Publication
  • 2014
    Title Assessment, origin, and implementation of breath volatile cancer markers
    DOI 10.1039/c3cs60329f
    Type Journal Article
    Author Haick H
    Journal Chemical Society Reviews
    Pages 1423-1449
    Link Publication
  • 2014
    Title Assessment of the exhalation kinetics of volatile cancer biomarkers based on their physicochemical properties
    DOI 10.1088/1752-7155/8/1/016003
    Type Journal Article
    Author Amann A
    Journal Journal of Breath Research
    Pages 016003
    Link Publication
  • 2014
    Title Monitoring of Selected Skin-Borne Volatile Markers of Entrapped Humans by Selective Reagent Ionization Time of Flight Mass Spectrometry in NO+ Mode
    DOI 10.1021/ac404242q
    Type Journal Article
    Author Mochalski P
    Journal Analytical Chemistry
    Pages 3915-3923
    Link Publication
  • 2014
    Title Product ion distributions for the reactions of NO+ with some physiologically significant volatile organosulfur and organoselenium compounds obtained using a selective reagent ionization time-of-flight mass spectrometer
    DOI 10.1002/rcm.6947
    Type Journal Article
    Author Mochalski P
    Journal Rapid Communications in Mass Spectrometry
    Pages 1683-1690
    Link Publication
  • 2013
    Title Chapter 3 Physiological Modeling for Analysis of Exhaled Breath
    DOI 10.1016/b978-0-44-462613-4.00003-9
    Type Book Chapter
    Author King J
    Publisher Elsevier
    Pages 26-46
    Link Publication
  • 2012
    Title Volatile organic compounds in exhaled breath: real-time measurements, modeling, and bio-monitoring applications.
    Type Conference Proceeding Abstract
    Author King J
    Conference The 1st International Workshop on Innovative Simulation for Health Care, W. Backfrieder et al. (eds), Proceedings of IWISH 2012
  • 2014
    Title Emission rates of selected volatile organic compounds from skin of healthy volunteers
    DOI 10.1016/j.jchromb.2014.04.006
    Type Journal Article
    Author Mochalski P
    Journal Journal of Chromatography B
    Pages 62-70
    Link Publication
  • 2014
    Title Product ion distributions for the reactions of NO+ with some physiologically significant aldehydes obtained using a SRI-TOF-MS instrument
    DOI 10.1016/j.ijms.2014.02.016
    Type Journal Article
    Author Mochalski P
    Journal International Journal of Mass Spectrometry
    Pages 23-31
    Link Publication
  • 2014
    Title Blood and breath profiles of volatile organic compounds in patients with end-stage renal disease
    DOI 10.1186/1471-2369-15-43
    Type Journal Article
    Author Mochalski P
    Journal BMC Nephrology
    Pages 43
    Link Publication
  • 2012
    Title Breath isoprene: Muscle dystrophy patients support the concept of a pool of isoprene in the periphery of the human body
    DOI 10.1016/j.bbrc.2012.05.159
    Type Journal Article
    Author King J
    Journal Biochemical and Biophysical Research Communications
    Pages 526-530
    Link Publication
  • 2016
    Title Modeling of breath methane concentration profiles during exercise on an ergometer*
    DOI 10.1088/1752-7155/10/1/017105
    Type Journal Article
    Author Szabó A
    Journal Journal of Breath Research
    Pages 017105
    Link Publication
  • 2016
    Title Quantification of selected volatile organic compounds in human urine by gas chromatography selective reagent ionization time of flight mass spectrometry (GC-SRI-TOF-MS) coupled with head-space solid-phase microextraction (HS-SPME)
    DOI 10.1039/c6an00825a
    Type Journal Article
    Author Mochalski P
    Journal Analyst
    Pages 4796-4803
    Link Publication
  • 2016
    Title A Compendium of Volatile Organic Compounds (VOCs) Released By Human Cell Lines
    DOI 10.2174/0929867323666160510122913
    Type Journal Article
    Author Filipiak W
    Journal Current Medicinal Chemistry
    Pages 2112-2131
    Link Publication
  • 2015
    Title Hybrid Volatolomics and Disease Detection
    DOI 10.1002/anie.201500153
    Type Journal Article
    Author Broza Y
    Journal Angewandte Chemie International Edition
    Pages 11036-11048
  • 2015
    Title Trace detection of endogenous human volatile organic compounds for search, rescue and emergency applications
    DOI 10.1016/j.trac.2014.11.018
    Type Journal Article
    Author Agapiou A
    Journal TrAC Trends in Analytical Chemistry
    Pages 158-175
  • 2015
    Title Hybride Volatolomik und der Nachweis von Krankheiten
    DOI 10.1002/ange.201500153
    Type Journal Article
    Author Broza Y
    Journal Angewandte Chemie
    Pages 11188-11201
  • 2013
    Title Stability of selected volatile breath constituents in Tedlar, Kynar and Flexfilm sampling bags
    DOI 10.1039/c2an36193k
    Type Journal Article
    Author Mochalski P
    Journal Analyst
    Pages 1405-1418
    Link Publication
  • 2013
    Title Release and uptake of volatile organic compounds by human hepatocellular carcinoma cells (HepG2) in vitro
    DOI 10.1186/1475-2867-13-72
    Type Journal Article
    Author Mochalski P
    Journal Cancer Cell International
    Pages 72
    Link Publication
  • 2013
    Title ABA-Cloud: support for collaborative breath research
    DOI 10.1088/1752-7155/7/2/026007
    Type Journal Article
    Author Elsayed I
    Journal Journal of Breath Research
    Pages 026007
    Link Publication
  • 2013
    Title Blood and breath levels of selected volatile organic compounds in healthy volunteers
    DOI 10.1039/c3an36756h
    Type Journal Article
    Author Mochalski P
    Journal Analyst
    Pages 2134-2145
    Link Publication
  • 2015
    Title Product ion distributions for the reactions of NO+ with some N-containing and O-containing heterocyclic compounds obtained using SRI-TOF-MS
    DOI 10.1016/j.ijms.2015.06.003
    Type Journal Article
    Author Mochalski P
    Journal International Journal of Mass Spectrometry
    Pages 42-46
    Link Publication
  • 2014
    Title Analysis of Volatile Organic Compounds Liberated and Metabolised by Human Umbilical Vein Endothelial Cells (HUVEC) In Vitro
    DOI 10.1007/s12013-014-0201-4
    Type Journal Article
    Author Mochalski P
    Journal Cell Biochemistry and Biophysics
    Pages 323-329
    Link Publication
  • 2014
    Title Quantitative analysis of volatile organic compounds released and consumed by rat L6 skeletal muscle cells in vitro
    DOI 10.1088/1752-7155/8/4/046003
    Type Journal Article
    Author Mochalski P
    Journal Journal of Breath Research
    Pages 046003
    Link Publication
  • 2018
    Title In vitro profiling of volatile organic compounds released by Simpson-Golabi-Behmel syndrome adipocytes
    DOI 10.1016/j.jchromb.2018.11.028
    Type Journal Article
    Author Mochalski P
    Journal Journal of Chromatography B
    Pages 256-261
    Link Publication
  • 2018
    Title Sniffing Entrapped Humans with Sensor Arrays
    DOI 10.1021/acs.analchem.8b00237
    Type Journal Article
    Author Gu¨Ntner A
    Journal Analytical Chemistry
    Pages 4940-4945
    Link Publication
  • 2018
    Title Modeling-based determination of physiological parameters of systemic VOCs by breath gas analysis, part 2
    DOI 10.1088/1752-7163/aab2b6
    Type Journal Article
    Author Ager C
    Journal Journal of Breath Research
    Pages 036011
    Link Publication

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