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HDAC1 and HDAC2 as regulators of tumorigenesis

HDAC1 and HDAC2 as regulators of tumorigenesis

Christian Seiser (ORCID: 0000-0002-7046-9352)
  • Grant DOI 10.55776/P28034
  • Funding program Principal Investigator Projects
  • Status ended
  • Start July 1, 2016
  • End June 30, 2021
  • Funding amount € 350,573

Disciplines

Biology (100%)

Keywords

    Histone Deacetylase, Histone Acetylation, Epigenetics, Chromatin, Mouse Genetics

Abstract Final report

Histone deacetylases (HDACs) are chromatin-associated regulators ofcell cycle progression, proliferation and differentiation. The use of small molecule HDAC inhibitors is a promising approach for cancer therapy and pan-HDAC inhibitors have been FDA-approved for treatment of cutaneous T-cell lymphomas. However, the function of individual members of the HDAC family in cancer is largely unknown. The closely related class I deacetylases HDAC1 and HDAC2 are excellent candidates as targets for tumor therapy because they are highly expressed in proliferating and tumor cells and are known regulators of mammalian cell proliferation. We have recently identified HDAC1 and HDAC2 as regulators of epidermal proliferation in a transgenic mouse model (Winter et al. (2013), EMBO J.). HDAC1 and HDAC2 significantly contribute to the total cellular deacetylase activity in the epidermis and partial reduction of HDAC1/HDAC2 activity results in epidermal hyperproliferation and spontaneous tumor formation. Surprisingly, loss of HDAC1 but not HDAC2 in the genetically induced SOS skin tumor model leads to hyperproliferation and enhanced tumor formation. In contrast, complete loss of HDAC1/HDAC2 activity in the epidermis causes impaired cell proliferation and apoptosis. Based on these data we hypothesize that depending on the gene dosage and the affected isoforms HDAC1 and HDAC2 have either oncogenic or oncosuppressor functions in the epidermis. Non-melanoma skin cancer is the most frequent cancer in the world but relatively few deaths are caused by it. However, squamous cell carcinoma (SCC) such as head-and-neck SCC is responsible for a quarter of million deaths annually. In this project we will examine whether HDAC1 and HDAC2 together are potential targets for skin tumor and SCC therapy. We will combine mouse genetics, shRNA-mediated knockdown approaches, application of novel inhibitors and genome-wide expression analyses to define the roles of HDAC1 and HDAC2 in murine and human cancer. We will compare the consequences of genetic ablation of Hdac1/Hdac2 with pharmacological inactivation of HDAC1/HDAC2 by isoform-specific inhibitors both in mouse and human skin tumors and will test a potential chemosensitizing effect of HDAC1/HDAC2-specific inhibitors. Our project will provide insights into the individual and redundant functions of HDAC1 and HDAC2 in the regulation of epidermal tumor development and maintenance and will be highly relevant for the application of HDAC inhibitors as anti-tumor therapeutics.

As the outermost organ of the body the skin is continuously exposed to pathogens and plays a critical role in defense against the environment and infectious agents. The most superficial layer of the skin, the epidermis, functions as a critical barrier against viruses, bacteria and fungi. Epigenetic mechanisms are crucial for the protective function of the epidermis. The innate human immune system is capable of recognizing and fighting pathogens such as viruses, bacteria or parasites. In addition to other conserved structure, it can detect pathogens based on their RNA and DNA. Since these nucleic acids are also present in human cells the immune system must be able to differentiate endogenous substances from exogenous ones in order to avoid autoinflammation or autoimmune diseases. This mechanism is also known as self/non-self discrimination. In this project we show that the epigenetic key enzyme DNA methyltransferase 1 is an important factor in preventing autoinflammation. Methylation of DNA is one of the most important epigenetic mechanisms in our cells. It not only controls cell-specific gene expression but prevents the activation of endogenous viruses, the so-called transposons, which can change their position within the genome and may induce cellular defence mechanisms. Loss of the key epigenetic enzyme DNA methyltransferase 1 results in autoinflammation and pathological changes occur in the skin. Reduced DNA methylation results in genomic instability, leading to the formation of cytoplasmic DNA. When these micronuclei are formed, cGAS, one of the main regulators of the innate immune system, erroneously recognizes the DNA as foreign or "non-self" and activates the immune system. These findings are particularly relevant for further investigations to understand the molecular mechanisms of autoinflammatory diseases but may also provide an explanation for the positive effects of epigenetic drugs on the efficacy of immunotherapy against cancer.

Research institution(s)
  • Medizinische Universität Wien - 70%
  • Veterinärmedizinische Universität Wien - 30%
Project participants
  • Lukas Kenner, Veterinärmedizinische Universität Wien , associated research partner
International project participants
  • James E. Bradner, Harvard Medical School - USA

Research Output

  • 169 Citations
  • 3 Publications
  • 1 Policies
  • 2 Methods & Materials
  • 1 Datasets & models
  • 1 Disseminations
  • 1 Fundings
Publications
  • 2022
    Title A toolbox for class I HDACs reveals isoform specific roles in gene regulation and protein acetylation
    DOI 10.1371/journal.pgen.1010376
    Type Journal Article
    Author Hess L
    Journal PLoS Genetics
    Link Publication
  • 2021
    Title DNA hypomethylation leads to cGAS-induced autoinflammation in the epidermis
    DOI 10.15252/embj.2021108234
    Type Journal Article
    Author Beck M
    Journal The EMBO Journal
    Link Publication
  • 2018
    Title Histone deacetylase function in CD4+ T cells
    DOI 10.1038/s41577-018-0037-z
    Type Journal Article
    Author Ellmeier W
    Journal Nature Reviews Immunology
    Pages 617-634
Policies
  • 2019
    Title Article HDACs als epigenetische Regulatoren des Zellwachstums und der Entwicklung in Journal HÄMATOLOGIE & ONKOLOGIE
    Type Citation in clinical reviews
Methods & Materials
  • 2017
    Title Class I HDAC HAP1 cell lines
    Type Cell line
    Public Access
  • 2016 Link
    Title Knock-in mice expressing catalytically inactive isoforms of HDAC1 or HDAC2
    Type Model of mechanisms or symptoms - mammalian in vivo
    Public Access
    Link Link
Datasets & models
  • 2021 Link
    Title RNA-seq data
    Type Database/Collection of data
    Public Access
    Link Link
Disseminations
  • 2019 Link
    Title 5th International Cancer Cluster Salzburg (CCS) workshop April 2019
    Type A talk or presentation
    Link Link
Fundings
  • 2016
    Title Bridge Early phase project Mimicking isoform-specific inhibitors - Genetic engineering of histone deacetylases
    Type Research grant (including intramural programme)
    Start of Funding 2016

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