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Small Molecules from Arthropods

Small Molecules from Arthropods

Günther Raspotnig (ORCID: 0000-0002-6947-9406)
  • Grant DOI 10.55776/P33840
  • Funding program Principal Investigator Projects
  • Status ended
  • Start September 1, 2021
  • End September 30, 2025
  • Funding amount € 399,947
  • Project website

Disciplines

Biology (60%); Chemistry (20%); Medical-Theoretical Sciences, Pharmacy (20%)

Keywords

    Soil Arthropoda, Bioactive Compounds, Small Molecules, Rule Of Five, Exocrine Glands

Abstract Final report

1) Scientific background: Arthropods are chemists par excellence: most species possess exocrine glands in which they produce chemical protectants against predators and microorganisms. Such secretions comprise a stunning diversity of small lipid molecules, representing a rich, but largely unexplored source of bioactive compounds. In soil - a moist, dirty, and microorganism-rich habitat - a large diversity of chemically protected arthropod taxa is found: these soil-dwellers belong to groups such as moss mites, harvestmen, springtails, and millipedes, and represent taxa that look back to an evolution of several 100 of millions of years. Such taxa have literally had enough time to diversify and perfect their chemical defenses. Interestingly, most therapeutics are small lipid molecules that meet Lipinskis rule of five, a concept to preliminarily evaluate the druglikeliness of a compound. Small molecules from arthropods (SMARTs) perfectly fit into this category. 2) Hypotheses & aims: Only very little research has been done with respect to the chemical ecology of soil-dwelling arthropod taxa, but has already led to the elucidation of several unusual, bioactive components that exclusively occur in these animals. We hypothesize that particularly soil-arthropods being equipped with a large number of exocrine glands to survive in their dirty, microorganism-rich habitat - possess a diversity of bioactive compounds far beyond the current state of knowledge. Objectives are i) to locate promising soil-arthropod taxa for a chemical screening of their exocrine secretions, including a complete chemical analysis of compounds involved; ii) to test these secretion compounds for bioactivity in bioassays. 3) New scientific ground: The proposed concept will result in the first representative screening of a new, unusual, and currently still neglected source of promising bio-pharmaceuticals. 4) Methods: will include: i) Collection of selected taxa of all major groups of soil arthropods in Austria, the Czech Republic, Poland, Germany, Italy, France, Spain, and all over the Balkans, relying on a unique network of specialists for different groups of soil Arthropoda. ii) Extraction and chemical analysis of exocrine secretions by modern mass spectrometric and nuclear magnetic resonance spectroscopic methods, followed by the synthesis of relevant compounds. iii) Evaluation of the bioactivity of extracts and their single (purified or synthesized) compounds in bioassays, mainly focusing on their antimicrobial activity but also measuring cellular responses of cultivated cells subsequent to component exposure. 5) Sientists involved: Günther Raspotnig (zoology, chemical ecology), Hans-Jörg Leis (chemistry/medicine/pharmacology), Slobodan Makarov (chemical ecology, bioactivity screening)

Exocrine glands of soil-dwelling arthropods represent ancient organ systems in which protective bioactive compounds evolved over several hundred million years. These small molecules are highly adapted for predator defense and to suppress microorganisms in the microbially rich soil environment and represent a largely unexplored potential source of novel antibiotics and bio-pharmaceuticals. This project focused on such small exocrine molecules from arthropods (SMARTs), which to date have remained poorly characterized. Using a phylogenetic prospecting approach, we identified promising taxa of chemically defended soil arthropods within specific lineages of millipedes (mainly Colobognatha), harvestmen (Insidiatores, Cyphophthalmi, troguloid Dyspnoi, sclerosomatid Eupnoi), and mites (primarily Oribatida). These groups possess large, sac-like exocrine glands that represent homologous systems within each taxon. We hypothesize that the presence of ancient homologous glands promotes the evolution of a high diversity of bioactive compounds. Particularly promising systems were the opisthonotal glands of Oribatida, prosomal scent glands of Opiliones, and serial defensive glands of Diplopoda. More than 100 compounds were extracted and chemically characterized. Most of them conform to Lipinski's rule of five, indicating favorable properties for potential pharmaceutical application. The compounds were compiled into comprehensive databases: so far, one covering exocrine compounds of harvestmen and one focusing on oil gland compounds of Oribatida. These databases represent the most complete compilations currently available for these groups, including analytical data, taxonomic distribution, and biological functions for detected compounds. Recurring chemical motifs were identified across taxa, including nitrogen-containing motifs, as well as spirocyclic- (Colobognatha), ethyl ketone- (Opiliones), aromatic- (Opiliones, Oribatida), and terpene-structures (Oribatida). Many compounds proved to be highly unusual or new to science. Notable examples include spirocyclic compounds from colobognathan millipedes and the "hermanniellines", a novel class of multi-ringed oil gland compounds from certain Oribatida (brachypyline Hermanniellidae). These compounds show pronounced species specificity and structural complexity, including multiple stereocenters. Bioassays revealed promising antibacterial activities for several compounds against a broad spectrum of bacteria. Other compounds, particularly nitrogen-containing substances, appeared to be neurotoxic and act as modulators of nervous system receptors. Stereochemistry proved critical, as different isomers often displayed markedly different biological activities. New scientific ground: The project identifies soil-dwelling arthropods as a highly promising and largely untapped source of bioactive natural products. By linking phylogeny, gland morphology, chemistry, and bioactivity, it establishes a novel framework for targeted natural product discovery and highlights ancient arthropod exocrine systems as a valuable resource for future bio-pharmaceutical research. Publications: Eight peer-reviewed publications resulted directly from this FWF project, complemented by three conference contributions. Six additional manuscripts are currently in press, under review, or in preparation.

Research institution(s)
  • Universität Graz - 100%
Project participants
  • Günter Fauler, associated research partner
  • Hans Jörg Leis, associated research partner
  • Olaf Kunert, Universität Graz , national collaboration partner
International project participants
  • Maja Ignjatov, Institute of Field and Vegetable Crops - Serbia
  • Bojan Ilic, University of Belgrade - Serbia
  • Dragan Antic, University of Belgrade - Serbia
  • Luka Lucic, University of Belgrade - Serbia
  • Slobodan E. Makarov, University of Belgrade - Serbia
  • Sofija Pavkovic Lucic, University of Belgrade - Serbia
  • Niko Radulovic, University of Nis - Serbia
  • Ivo Karaman, University of Novi Sad - Serbia
  • Maja Karaman, University of Novi Sad - Serbia

Research Output

  • 6 Citations
  • 9 Publications
  • 1 Policies
  • 1 Methods & Materials
  • 6 Scientific Awards
Publications
  • 2025
    Title Scenting Ketones in the Defense Glands of Two Julids From the Caucasus (Arthropoda, Myriapoda, Diplopoda, Julida).
    DOI 10.1007/s10886-025-01603-4
    Type Journal Article
    Author Makarov Se
    Journal Journal of chemical ecology
    Pages 50
  • 2024
    Title Simple protocol for combined extraction of exocrine secretions and RNA in small arthropods
    DOI 10.1093/biomethods/bpae054
    Type Journal Article
    Author Bodner M
    Journal Biology Methods and Protocols
  • 2024
    Title Simple protocol for combined extraction of exocrine secretion and RNA in small arthropods v1
    DOI 10.17504/protocols.io.n92ld8mb7v5b/v1
    Type Preprint
    Author Fröhlich D
  • 2024
    Title Alkaloid chemistry in pill-millipedes: Defensive secretion in two species of Typhloglomeris Verhoeff, 1898 (Diplopoda, Glomerida, Glomeridellidae)
    DOI 10.1007/s00049-024-00400-x
    Type Journal Article
    Author Antić D
    Journal Chemoecology
  • 2023
    Title After chemo-metamorphosis: p-menthane monoterpenoids characterize the oil gland secretion of adults of the oribatid mite, Nothrus palustris.
    DOI 10.1007/s00049-023-00386-y
    Type Journal Article
    Author Bodner M
    Journal Chemoecology
    Pages 71-82
  • 2023
    Title Alkaloids from millipedes: a re-evaluation of defensive exudates from Polyzonium germanicum
    DOI 10.3389/fevo.2023.1212452
    Type Journal Article
    Author Kunert O
    Journal Frontiers in Ecology and Evolution
  • 2022
    Title The scent gland chemistry of Gagrellinae (Opiliones, Sclerosomatidae): evidence for sequestration of myrmicacin in a species of Prionostemma
    DOI 10.1007/s00049-022-00373-9
    Type Journal Article
    Author Raspotnig G
    Journal Chemoecology
    Pages 139-146
    Link Publication
  • 2022
    Title Polymorphic scent gland secretions in Nelima harvestmen: “Sclerosomatid compounds” but different chemical lineages
    DOI 10.3389/fevo.2022.993368
    Type Journal Article
    Author Raspotnig G
    Journal Frontiers in Ecology and Evolution
    Pages 993368
    Link Publication
  • 2022
    Title Two new species of the genus Siro Latreille, 1796 (Opiliones, Cyphophthalmi, Sironidae) in the European fauna
    DOI 10.5852/ejt.2022.834.1893
    Type Journal Article
    Author Karaman I
    Journal European Journal of Taxonomy
    Pages 1–21-1–21
    Link Publication
Policies
  • 2019 Link
    Title chief editor of scientific journal
    Type Contribution to new or improved professional practice
    Link Link
Methods & Materials
  • 2024 Link
    Title combined extraction of RNA and exocrine secretions from small arthropods
    DOI 10.1093/biomethods/bpae054
    Type Biological samples
    Public Access
    Link Link
Scientific Awards
  • 2025
    Title Chief editor of "Chemoecology"
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International
  • 2025
    Title The puzzling chemistry of millipedes: current challenges in compound identification
    Type Personally asked as a key note speaker to a conference
    DOI 10.5281/zenodo.16811331
    Level of Recognition Continental/International
  • 2024
    Title Chief editor of "Chemoecology"
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International
  • 2023
    Title Chief editor of "Chemoecology"
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International
  • 2022
    Title Chief editor of "Chemoecology"
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International
  • 2021
    Title Chief editor of "Chemoecology"
    Type Appointed as the editor/advisor to a journal or book series
    Level of Recognition Continental/International

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