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Analysis of missense mutations in organic cation transporter

Analysis of missense mutations in organic cation transporter

Harald H. Sitte (ORCID: 0000-0002-1339-7444)
  • Grant DOI 10.55776/P34670
  • Funding program Principal Investigator Projects
  • Status ended
  • Start June 1, 2021
  • End September 30, 2024
  • Funding amount € 404,943
  • Project website

Disciplines

Computer Sciences (40%); Medical-Theoretical Sciences, Pharmacy (60%)

Keywords

    Organic Cation Transporter 3, Homology Modelling, Neurotransmitter transporter, Structure-function relationship, Missense mutation, Ligand interaction profiling

Abstract Final report

Monoaminergic neurotransmitters act at their cognate receptors and mediate synaptic transmission. Two types of neurotransmitter transporters actively contribute to end signalling by removing neurotransmitters from the synapse: these are the i) uptake-1 transporters (high-affinity - low capacity) and the ii) uptake-2 transporters (low-affinity - high-capacity), the polyspecific organic cation transporter 3 (OCT3). Twenty-six missense mutations have been identified in OCT3 (OCT3-MUT) from a Danish cohort of patients suffering from distinct psychiatric disorders. The aim of the current grant proposal is to establish knowledge of the structure-function relationship in OCT3 at an atomic level and to ascertain the impact of the identified mutations on OCT3 function. The proposed research strategy attempts to compare OCT3 wildtype (OCT3-WT) and OCT3-MUT on the basis of: (i) structural approaches and computational homology models to examine structural transport dynamics on validated 3D-models, (ii) in vitro activity to develop an understanding of the functional consequences of the missense mutations at the molecular level, and (iii) expression levels and oligomerization properties, to identify the interplay between mutations, oligomerisation, amount of surface expressed OCT3-WT/MUT and function. Experimental in vitro approaches will employ biochemical tracer flux experiments and several microscopy methods to assess transporter expression in the cells and oligomerization on the cell surface. We will combine several approaches in an iterative strategy: We will establish homology models of OCT3-WT and OCT3-MUT by extensive molecular dynamics simulations thereon to evaluate structural dynamics and functional consequences of the mutations. The computational methods will integrate experimental datasets to establish an experimentally verified OCT3-WT homology model and to understand disease-causing mutations at the molecular level. OCT3 is an essential, but understudied transporter, which may become an important clinical target for neurological diseases. Minimal outcome of this application is a functional characterization of OCT3-WT and OCT3-MUT, as done for uptake-1 transporters. The vision is to establish a comprehensive structure- function relationship based on knowledge of OCT3-WT transport function and oligomerization at an atomic level.

Understanding OCT3: Unraveling Its Structure and Function for Future Therapeutic Advances Our project aims to better understand a key protein in the human body called Organic Cation Transporter 3 (OCT3). This transporter plays a crucial role in moving important molecules-such as neurotransmitters dopamine and serotonin-across cell membranes. These molecules regulate mood, cognition, and various other physiological functions. A detailed understanding of how OCT3 works could have significant implications for developing new treatments for mental health conditions, cardiovascular diseases, and drug interactions. We successfully created stable cell lines containing different genetic variants (mutants) of OCT3 and tested how well they transport specific substances. Some mutant versions of the transporter showed no activity, while others were hyperactive compared to the normal (wild-type) transporter. Using advanced imaging techniques, we discovered that the hyperactive transporters were simply present in greater amounts on the cell surface, while others had defects in how they were processed within the cell. To explore whether these defects could be corrected, we plan to test a known drug, 4-phenylbutyrate, which has been successfully used for treating other diseases caused by similar protein misfolding issues. A major milestone of our project was solving the three-dimensional structure of OCT3 using an advanced imaging method called cryo-electron microscopy (cryo-EM). In collaboration with an international research team, we successfully determined the structure of OCT3 in three different states: unbound (apo), bound to the inhibitor decynium-22, and bound to the hormone corticosterone. This was a breakthrough, as it provides the first-ever high-resolution model of OCT3, laying the foundation for future studies. With this structural information, we used sophisticated computer simulations to study how OCT3 interacts with its natural substrates, dopamine and serotonin, as well as various inhibitors. By running extensive molecular dynamics simulations, we uncovered key differences in how these molecules interact with specific regions of the protein. Our findings suggest that in order for OCT3 to function properly, certain molecular interactions must take place-interactions that inhibitors appear to disrupt. We are now extending our simulations to observe how OCT3 undergoes structural changes over time and to identify new molecules that could regulate its function. These insights could lead to the development of drugs that either enhance or block OCT3 activity, which may have therapeutic benefits for neurological and cardiovascular disorders. By combining laboratory experiments, advanced imaging, and computational modeling, our project is bringing us closer to understanding OCT3 at an unprecedented level. This knowledge could pave the way for future medical breakthroughs, improving treatments for conditions where OCT3 plays a critical role.

Research institution(s)
  • Medizinische Universität Wien - 100%
International project participants
  • Ulrik Gether, University of Copenhagen - Denmark
  • Volodymyr Korkhov, Paul Scherrer Institut Villigen - Switzerland

Research Output

  • 165 Citations
  • 20 Publications
  • 3 Scientific Awards
Publications
  • 2025
    Title Rescue of Epilepsy-Associated Mutations of the Highly Conserved Glycine Residue 443 in the Human GABA Transporter 1
    DOI 10.1096/fj.202403159rr
    Type Journal Article
    Author Shah N
    Journal The FASEB Journal
    Link Publication
  • 2025
    Title Pathogenic variants at the N-terminal arginine residue 44 disrupt human GABA transporter 1 function: insights from Drosophila epilepsy models
    DOI 10.3389/fphar.2025.1674737
    Type Journal Article
    Author Shah N
    Journal Frontiers in Pharmacology
    Pages 1674737
    Link Publication
  • 2022
    Title Structural basis of organic cation transporter-3 inhibition
    DOI 10.1038/s41467-022-34284-8
    Type Journal Article
    Author Khanppnavar B
    Journal Nature Communications
    Pages 6714
    Link Publication
  • 2021
    Title The Interaction of Organic Cation Transporters 1-3 and PMAT with Psychoactive Substances
    DOI 10.1007/164_2021_469
    Type Book Chapter
    Author Maier J
    Publisher Springer Nature
    Pages 199-214
  • 2021
    Title Interaction Profiles of Central Nervous System Active Drugs at Human Organic Cation Transporters 1–3 and Human Plasma Membrane Monoamine Transporter
    DOI 10.3390/ijms222312995
    Type Journal Article
    Author Angenoorth T
    Journal International Journal of Molecular Sciences
    Pages 12995
    Link Publication
  • 2023
    Title Interaction of GAT1 with sodium ions: from efficient recruitment to stabilisation of substrate and conformation
    DOI 10.1101/2023.10.10.561652
    Type Preprint
    Author Lazzarin E
    Pages 2023.10.10.561652
    Link Publication
  • 2023
    Title Mephedrone induces partial release at human dopamine transporters but full release at human serotonin transporters
    DOI 10.1016/j.neuropharm.2023.109704
    Type Journal Article
    Author Mayer F
    Journal Neuropharmacology
    Pages 109704
    Link Publication
  • 2024
    Title Investigating sodium ions binding and protein dynamics in GABA transporters
    Type PhD Thesis
    Author Erika Lazzarin
  • 2024
    Title Dissecting sodium binding and occlusion mechanisms in SLC6 transporters: from static structures to free energy landscapes
    Type PhD Thesis
    Author Leticia Alves Da Silva
  • 2023
    Title Ligand coupling mechanism of the human serotonin transporter differentiates substrates from inhibitors
    DOI 10.21203/rs.3.rs-3135449/v1
    Type Preprint
    Author Stockner T
    Link Publication
  • 2023
    Title Ethanol inhibits dopamine uptake via organic cation transporter 3: Implications for ethanol and cocaine co-abuse
    DOI 10.1038/s41380-023-02064-5
    Type Journal Article
    Author Clauss N
    Journal Molecular Psychiatry
    Pages 2934-2945
    Link Publication
  • 2022
    Title Serotonin-releasing agents with reduced off-target effects
    DOI 10.1038/s41380-022-01843-w
    Type Journal Article
    Author Mayer F
    Journal Molecular Psychiatry
    Pages 722-732
    Link Publication
  • 2024
    Title Ligand coupling mechanism of the human serotonin transporter differentiates substrates from inhibitors
    DOI 10.1038/s41467-023-44637-6
    Type Journal Article
    Author Gradisch R
    Journal Nature Communications
    Pages 417
    Link Publication
  • 2024
    Title Free energy profile of the substrate-induced occlusion of the human serotonin transporter
    DOI 10.1111/jnc.16061
    Type Journal Article
    Author Da Silva L
    Journal Journal of Neurochemistry
    Pages 1993-2006
    Link Publication
  • 2024
    Title Interaction of GAT1 with sodium ions: from efficient recruitment to stabilisation of substrate and conformation
    DOI 10.7554/elife.93271
    Type Preprint
    Author Gradisch R
  • 2024
    Title Interaction of GAT1 with sodium ions: from efficient recruitment to stabilisation of substrate and conformation
    DOI 10.7554/elife.93271.1
    Type Preprint
    Author Gradisch R
  • 2022
    Title Rescue of Misfolded Organic Cation Transporter 3 Variants
    DOI 10.3390/cells12010039
    Type Journal Article
    Author Angenoorth T
    Journal Cells
    Pages 39
    Link Publication
  • 2022
    Title Structural basis of organic cation transporter-3 inhibition
    DOI 10.1101/2022.07.14.499921
    Type Preprint
    Author Khanppnavar B
    Pages 2022.07.14.499921
    Link Publication
  • 2022
    Title Serotonin-releasing agents with reduced off-target effects
    DOI 10.21203/rs.3.rs-1886596/v1
    Type Preprint
    Author Mayer F
    Link Publication
  • 2022
    Title A Novel and Selective Dopamine Transporter Inhibitor, (S)-MK-26, Promotes Hippocampal Synaptic Plasticity and Restores Effort-Related Motivational Dysfunctions
    DOI 10.3390/biom12070881
    Type Journal Article
    Author Kouhnavardi S
    Journal Biomolecules
    Pages 881
    Link Publication
Scientific Awards
  • 2022
    Title Julian Maier receives Rudolf Buchheim Prize 2022
    Type Research prize
    Level of Recognition Continental/International
  • 2020
    Title Julian Maier receives Theodor Körner Prize
    Type Research prize
    Level of Recognition National (any country)
  • 2023
    Title Julian Maier receives Hans and Blanca Moser Award 2023 in the field of cardiovascular research
    Type Research prize
    Level of Recognition National (any country)

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