Uncage hijacked kinases from SARS-CoV-2 interactions
Uncage hijacked kinases from SARS-CoV-2 interactions
Disciplines
Biology (50%); Chemistry (25%); Medical-Theoretical Sciences, Pharmacy (25%)
Keywords
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Kinase,
Inhibitor,
Biosensor,
Omics
Kinases are versatile signaling nodes and thus represent a central target for viruses to reprogram the host cell for their needs. SARS-CoV-2 efficiently hijacks this crucial cellular control mechanism for ensuring their optimal propagation. We assume that targeting druggable kinase activities may alter SARS-CoV-2:host-protein interactions and functions. We bear the hope that targeting a hijacked host kinase may reduce virus assembly and/or pathological implications for cellular functions. We aim to validate and chemically target interdependencies emanating from two kinase cascades with viral proteins directly in human pulmonary cell lines. First, we apply a cell-based kinase conformation (KinCon) reporter for determining enzyme activity changes upon transient and viral expression of selected viral SARS-Cov-2 proteins. Second, we define the impact of kinase-directed small molecules (activators/inhibitors) on cellular SARS-CoV-2 functions. Third, we focus on modulating the cAMP-PKA and MAPK pathways to determine consequences on the effectiveness of virus assembly and function. Vaccines for combating SARS-CoV-2 infections save thousands of lives. Mutations may hamper their efficacies. We bear the hope that targeting host kinases may become part of COVID-19 and mutation-decoupled therapy approaches.
- Dorothee Von Laer, Medizinische Universität Innsbruck , national collaboration partner
- Janine Kimpel, Medizinische Universität Innsbruck , associated research partner
- Marcel Kwiatkowski, Universität Innsbruck , national collaboration partner
- Susan S. Taylor, University of California - USA
Research Output
- 199 Citations
- 26 Publications
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2025
Title Exploiting metabolic adaptations to overcome dabrafenib treatment resistance in melanoma cells DOI 10.1002/1878-0261.70169 Type Journal Article Author Eller S Journal Molecular Oncology Link Publication -
2025
Title CDK6 kinase inhibition unmasks metabolic dependencies in BCR::ABL1+ leukemia DOI 10.1038/s41419-025-07434-1 Type Journal Article Author Scheiblecker L Journal Cell Death & Disease Pages 107 Link Publication -
2025
Title A Catalytically Inactive Protein Kinase C alpha Mutation Drives Chordoid Glioma by Pathway Rewiring DOI 10.1101/2025.05.30.657104 Type Preprint Author Bellamy C Pages 2025.05.30.657104 Link Publication -
2022
Title Resistor: An algorithm for predicting resistance mutations via Pareto optimization over multistate protein design and mutational signatures DOI 10.1016/j.cels.2022.09.003 Type Journal Article Author Guerin N Journal Cell Systems Link Publication -
2022
Title DISRUPTOR: Computational identification of oncogenic mutants disrupting protein interactions DOI 10.1101/2022.11.02.514903 Type Preprint Author Kugler V Pages 2022.11.02.514903 Link Publication -
2024
Title Cdk6’s functions are critically regulated by its unique C-terminus DOI 10.1016/j.isci.2024.111697 Type Journal Article Author Schirripa A Journal iScience Pages 111697 Link Publication -
2024
Title Phosphorylation of the compartmentalized PKA substrate TAF15 regulates RNA–protein interactions DOI 10.1007/s00018-024-05204-4 Type Journal Article Author Feichtner A Journal Cellular and Molecular Life Sciences Pages 162 Link Publication -
2023
Title Characterizing SARS-CoV-2 neutralization profiles after bivalent boosting using antigenic cartography DOI 10.1038/s41467-023-41049-4 Type Journal Article Author Rössler A Journal Nature Communications Pages 5224 Link Publication -
2023
Title Missense variant interaction scanning reveals a critical role of the FERM domain for tumor suppressor protein NF2 conformation and function DOI 10.26508/lsa.202302043 Type Journal Article Author Moesslacher C Journal Life Science Alliance Link Publication -
2023
Title Tracking and blocking interdependencies of cellular BRAF-MEK oncokinase activities DOI 10.1093/pnasnexus/pgad185 Type Journal Article Author Fleischmann J Journal PNAS Nexus Link Publication -
2023
Title Disruptor: Computational identification of oncogenic mutants disrupting protein-protein and protein-DNA interactions DOI 10.1038/s42003-023-05089-2 Type Journal Article Author Kugler V Journal Communications Biology Pages 720 Link Publication -
2022
Title Tracking mutation and drug-driven alterations of oncokinase conformations DOI 10.1007/s12254-021-00790-6 Type Journal Article Author Feichtner A Journal memo - Magazine of European Medical Oncology Pages 137-142 Link Publication -
2022
Title Resistor: an algorithm for predicting resistance mutations using Pareto optimization over multistate protein design and mutational signatures DOI 10.1101/2022.01.18.476733 Type Preprint Author Guerin N Pages 2022.01.18.476733 Link Publication -
2022
Title Kinase perturbations redirect mitochondrial function in cancer DOI 10.26124/bec:2022-0013 Type Journal Article Author Torres-Quesada O Journal Bioenergetics communications Pages 17 -
2022
Title BA.2 omicron differs immunologically from both BA.1 omicron and pre-omicron variants DOI 10.1101/2022.05.10.22274906 Type Preprint Author Rössler A Pages 2022.05.10.22274906 Link Publication -
2024
Title Enhanced TROSY Effect in [2-19F, 2-13C] Adenosine and ATP Analogs Facilitates NMR Spectroscopy of Very Large Biological RNAs in Solution DOI 10.1002/anie.202316273 Type Journal Article Author Juen F Journal Angewandte Chemie International Edition Link Publication -
2024
Title Enhanced TROSY Effect in [2-19F, 2-13C] Adenosine and ATP Analogs Facilitates NMR Spectroscopy of Very Large Biological RNAs in Solution DOI 10.1002/ange.202316273 Type Journal Article Author Juen F Journal Angewandte Chemie Link Publication -
2024
Title A mutation in the PRKAR1B gene drives pathological mechanisms of neurodegeneration across species DOI 10.1093/brain/awae154 Type Journal Article Author Benjamin-Zukerman T Journal Brain Pages 3890-3905 Link Publication -
2024
Title Direct comparison of SARS-CoV-2 variant specific neutralizing antibodies in human and hamster sera DOI 10.1038/s41541-024-00888-y Type Journal Article Author Rössler A Journal npj Vaccines Pages 85 Link Publication -
2024
Title Impact of protein and small molecule interactions on kinase conformations DOI 10.7554/elife.94755 Type Journal Article Author Kugler V Journal eLife Link Publication -
2024
Title Impact of protein and small molecule interactions on kinase conformations DOI 10.7554/elife.94755.3 Type Journal Article Author Kugler V Journal eLife Link Publication -
2024
Title Kinases in motion: impact of protein and small molecule interactions on kinase conformations DOI 10.1101/2024.01.11.575270 Type Preprint Author Kugler V Pages 2024.01.11.575270 Link Publication -
2023
Title Characterizing SARS-CoV-2 neutralization profiles after bivalent boosting using antigenic cartography DOI 10.1101/2023.05.02.23289412 Type Preprint Author Rössler A Pages 2023.05.02.23289412 Link Publication -
2022
Title Missense variant interaction scanning reveals a critical role of the FERM-F3 domain for tumor suppressor protein NF2 conformation and function DOI 10.1101/2022.12.11.519953 Type Preprint Author Moesslacher C Pages 2022.12.11.519953 Link Publication -
2022
Title BA.2 and BA.5 omicron differ immunologically from both BA.1 omicron and pre-omicron variants DOI 10.1038/s41467-022-35312-3 Type Journal Article Author Rössler A Journal Nature Communications Pages 7701 Link Publication -
2022
Title Physiological Cell Culture Media Tune Mitochondrial Bioenergetics and Drug Sensitivity in Cancer Cell Models DOI 10.3390/cancers14163917 Type Journal Article Author Torres-Quesada O Journal Cancers Pages 3917 Link Publication