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Fighting Extinction - Conservation biotechnologies for endangered plants

Fighting Extinction - Conservation biotechnologies for endangered plants

Andrea Kodym (ORCID: 0000-0002-7632-7603)
  • Grant DOI 10.55776/V351
  • Funding program Elise Richter
  • Status ended
  • Start July 1, 2014
  • End June 30, 2020
  • Funding amount € 344,526
  • Project website

Disciplines

Other Natural Sciences (10%); Biology (90%)

Keywords

    Cryopreservation, Cryostress, Cryotolerance, Somaclonal Variation, In Vitro Culture, Germplasm Storage

Abstract Final report

In Austria, about 35% of higher plants and ferns are found on the Austrian Red List in categories 0 (extinct or missing) and 1- 3 (threatened). The conservation of endangered species in their natural environment is of utmost importance, but may not be sufficient to safeguard survival, in particular, if the habitat itself is under threat. Materials in ex situ conservations such as living plant collections and seed banks provide some degree of backup. However, they suffer from practical limitations and cannot meet the requirements of all species nor all conservation concepts. Alternatively, cryopreservation allows the conservation of valuable germplasm in liquid nitrogen at -196 oC on a long-term basis. Significant progress has been made in recent years and improved vitrification based cryopreservation protocols are now widely applied. However, the development of a protocol for a new species is still slow due to the need to optimise each step of the procedure through trial and error. In this project, fundamental processes underlying the cryostorage of plants will be studied and will provide a rationale for optimising cryopreservation methods for a wider range of species. Pre-conditioning cold treatments stimulate stress response and promote complex changes within plant cells such as altered membrane composition and sugar accumulation. These changes in cold-acclimated and non-acclimated (control) shoot tips will be studied through biochemical and electrolyte leakage analysis. Further, to measure and determine glass transition phases and crystallisation in tissues used for cryopreservation differential scanning calorimetry will be carried out. The findings will be correlated with regrowth after cryostorage, which will elaborate if induced cold stress responses increased cryotolerance. A critical aspect in the cryopreservation process is the regeneration of plants after rewarming. The ultrastructure of cells within the meristematic tissue in shoot tips will be studied before and after cryostorage. It will reveal which parts of the shoot tips survive and eventually contribute to the regeneration process. The final objective is to generate vigorous and true-to-type plants. The project will establish if regenerated plants are free from somaclonal variation and of good physiological health using flow cytometry, phenotypic and biochemical analysis. This project uses Austrian endangered plant species as model species; a group of plants that is under-researched and has never undergone cryopreservation. The project will acquire locally relevant data to provide evidence of the feasibility but also limitations of this methodology to reduce the perceived inherent risks and to overcome adoption barriers leading to application in Austria. As part of the project, a cryopreservation facility will be established in Austria in collaboration with the cryo-genebank IPK, Gatersleben (Germany) and the Botanic Gardens Kew (UK) and Kings Park (Australia).

In Austria, about 35% of higher plants and ferns are found on the Austrian Red List in categories 0 (extinct or missing) and 1- 3 (threatened). The conservation of endangered species in their natural environment is of utmost importance, but may not be sufficient to safeguard survival, in particular, if the habitat itself is under threat. Materials in ex situ conservations such as living plant collections and seed banks provide some degree of backup. However, they suffer from practical limitations and cannot meet the requirements of all species nor all conservation concepts. Alternatively, cryopreservation allows the conservation of valuable germplasm in liquid nitrogen at -196 oC on a long-term basis. We developed cryopreservation protocols for endangered Austrian wild plant species for germplasm conservation. In particular, we looked into the occurrence of latent bacteria and their impact on regeneration. The use of winter-acclimated field material of herbaceous dicots as explant source for cryopreservation has been first described as part of this project. We further performed a genetic population study in Artemisia laciniata and included old herbarium specimen of nowadays extinct European populations. Our work demonstrated proof of concept and the feasibility of using biotechnology in conservation. Numerous outreach activities complemented our research to raise awareness for conservation issues among the public.

Research institution(s)
  • Universität Wien - 100%
International project participants
  • Eric Bunn, Botanic Gardens and Parks Authority - Australia
  • Shane Turner, Botanic Gardens and Parks Authority - Australia
  • Joachim Keller, Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) - Germany
  • Viswambharan Sarasan, Royal Botanic Gardens

Research Output

  • 4 Citations
  • 8 Publications
  • 1 Policies
  • 4 Methods & Materials
  • 7 Disseminations
  • 5 Fundings
Publications
  • 2020
    Title Direct cryopreservation of winter-acclimated buds of Dracocephalum austriacum (Lamiaceae) from field material
    DOI 10.1007/s11240-020-01850-1
    Type Journal Article
    Author Rasl T
    Journal Plant Cell, Tissue and Organ Culture (PCTOC)
    Pages 167-176
    Link Publication
  • 2019
    Title Back to the roots: protocol for the photoautotrophic micropropagation of medicinal Cannabis
    DOI 10.1007/s11240-019-01635-1
    Type Journal Article
    Author Kodym A
    Journal Plant Cell, Tissue and Organ Culture (PCTOC)
    Pages 399-402
    Link Publication
  • 2019
    Title OCCURRENCE OF LATENT BACTERIA DURING CRYOPRESERVATION OF LONG-TERM IN VITRO CULTURES OF COLTSFOOT, Tussilago farfara
    Type Journal Article
    Author Hambeck M
    Journal Cryoletters
    Pages 333-340
    Link Publication
  • 2018
    Title Population genomics show last European stand of Artemisia laciniata (Asteraceae) as fairly diverse despite extreme population size.
    Type Conference Proceeding Abstract
    Author Hatfaludi T
    Conference ConsGen 18 Third Annual meeting in conservation genetics.
  • 2018
    Title Conservation biotechnologies for endangered plants in Austria using Artemisia laciniata as a model species
    Type Conference Proceeding Abstract
    Author Kodym A
    Conference Eurogard VIII European Botanic Gardens Congress
    Link Publication
  • 2018
    Title MICROPROPAGATION AND CRYOCONSERVATION OF THE ENDANGERED PLANT SPECIES Artemisia laciniata (ASTERACEAE)
    Type Journal Article
    Author Kodym Andrea
    Journal CRYOLETTERS
    Pages 177-189
  • 2018
    Title Protocol for Radio-sensitivity testing; In: Protocol for radiosensitivity testing
    Type Book Chapter
    Author Kodym A
    Publisher FAO
    Pages 32 - 44
    Link Publication
  • 2017
    Title The Botanical Garden of the University of Vienna - examples for conservation activities
    Type Conference Proceeding Abstract
    Author Bröderbauer C
    Conference First International Congress of Danube Region Botanical Gardens
    Link Publication
Policies
  • 2016
    Title Artemisia laciniata in situ conservation
    Type Influenced training of practitioners or researchers
Methods & Materials
  • 2020
    Title Direct cryopreservation of winter buds
    Type Technology assay or reagent
    Public Access
  • 2018
    Title Determine plant health of in vitro plants
    Type Technology assay or reagent
    Public Access
  • 2018
    Title Museomics
    Type Technology assay or reagent
    Public Access
  • 0
    Title The study of endophytes of in vitro plants using NGS
    Type Technology assay or reagent
    Public Access
Disseminations
  • 2016 Link
    Title Biodiversity Day at the Botanic Garden
    Type Participation in an activity, workshop or similar
    Link Link
  • 2018 Link
    Title Green Pharmacy exhibition
    Type Participation in an activity, workshop or similar
    Link Link
  • 2015 Link
    Title Fascination of Plants Day
    Type Participation in an activity, workshop or similar
    Link Link
  • 2018 Link
    Title School visit
    Type Participation in an open day or visit at my research institution
    Link Link
  • 2015 Link
    Title Raritätenbörse
    Type Participation in an activity, workshop or similar
    Link Link
  • 2017
    Title Project workshop
    Type A formal working group, expert panel or dialogue
  • 2018
    Title Long Night of Research & Open Day Biologische Station Illmitz
    Type Participation in an activity, workshop or similar
Fundings
  • 2019
    Title LA Landwirtschaftliche Entwicklung
    Type Research grant (including intramural programme)
    Start of Funding 2019
    Funder European Commission
  • 2020
    Title F & E Kommunikation
    Type Travel/small personal
    Start of Funding 2020
    Funder Wirtschaftsagentur Wien
  • 2016
    Title FFG Innovationsscheck plus
    Type Research grant (including intramural programme)
    Start of Funding 2016
    Funder Austrian Research Promotion Agency
  • 2018
    Title IR spectrometry for predictive profiling of cannabinoids
    Type Research grant (including intramural programme)
    Start of Funding 2018
    Funder Solutions 4 Science
  • 2019
    Title Revitalisation of the medicinal garden of the Department of Pharmacognosy
    Type Travel/small personal
    Start of Funding 2019
    Funder University of Vienna

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