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NECESSITY-New chemical entities modulating SARSCoV2 activity

NECESSITY-New chemical entities modulating SARSCoV2 activity

Theresia Dunzendorfer-Matt (ORCID: )
  • Grant DOI 10.55776/I5406
  • Funding program Principal Investigator Projects International
  • Status ended
  • Start November 1, 2021
  • End October 31, 2025
  • Funding amount € 394,716
  • Project website

DACH: Österreich - Deutschland - Schweiz

Disciplines

Biology (70%); Chemistry (15%); Health Sciences (15%)

Keywords

    X-ray crystallographic screening, Drug Repurposing, Mutation Driven Drug Resistance, Translational Virology, Kinetic Driven Rational Organic Synthesis, Inhibiton Of Essential Sars-Cov-2 Enzyme

Abstract

Enzymes play a pivotal role in the propagation of viruses, their inhibition is a hallmark in established therapies e.g. against HIV-Infection. Among thousands of enzyme binding molecules, only a limited number is suitable as a drug. Under this international proposal three research sites teamed up to take the challenge of finding inhibitors based on the exactly known 3d structure of a SARS-CoV-2 enzyme. Vladimir Cryštof and his team (Olmütz/CZ) synthesize about 9,000 compounds which are tested by Christian Filer at the Helmholtz Center (Berlin/D) via differential X-ray diffraction in a high throughput mode for binding to a SARS-CoV-2 enzyme. In the FWF-funded project part the co-authors and research partners Theresia Dunzendorfer- Matt (Innsbruck Medical University) and Eduard Stefan (University of Innsbruck) will analyze preselected molecules in a reiterative process for interaction and inhibition in test tubes and in cultivated cells. Substances are filtered according to efficacy in vitro, specificity in a biosensor system, and development of resistance and finally screened by the virologist Christian Drosten (Charité Berlin/D). Aim of this project is the allocation of selected molecules as starting material for therapeutic compounds. The designed partially automated pipeline can in principle also be adapted to the development of other drugs. 2022-05-11created by TDMpage 1 1

Research institution(s)
  • Medizinische Universität Innsbruck - 58%
  • Universität Innsbruck - 42%
Project participants
  • Klaus Scheffzek, Medizinische Universität Innsbruck , former principal investigator
  • Theresia Dunzendorfer-Matt, Medizinische Universität Innsbruck , national collaboration partner
  • Eduard Stefan, Universität Innsbruck , associated research partner
  • Rainer Schneider, Universität Innsbruck , national collaboration partner
International project participants
  • Vladimir Krystof, Palacky University - Czechia
  • Christian Drosten, Charité - Universitätsmedizin Berlin - Germany
  • Wulf Blankenfeldt, Helmholtz-Gemeinschaft Deutscher Forschungszentren - Germany
  • Christian Feiler, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH - Germany

Research Output

  • 34 Citations
  • 12 Publications
Publications
  • 2025
    Title A patent review of Mpro protease inhibitors for the treatment of COVID-19 infections (2020 – present)
    DOI 10.1080/13543776.2025.2588773
    Type Journal Article
    Author Mik V
    Journal Expert Opinion on Therapeutic Patents
    Pages 1-19
  • 2025
    Title Exploiting metabolic adaptations to overcome dabrafenib treatment resistance in melanoma cells
    DOI 10.1002/1878-0261.70169
    Type Journal Article
    Author Eller S
    Journal Molecular Oncology
    Link Publication
  • 2025
    Title CDK6 kinase inhibition unmasks metabolic dependencies in BCR::ABL1+ leukemia
    DOI 10.1038/s41419-025-07434-1
    Type Journal Article
    Author Scheiblecker L
    Journal Cell Death & Disease
    Pages 107
    Link Publication
  • 2025
    Title A Catalytically Inactive Protein Kinase C alpha Mutation Drives Chordoid Glioma by Pathway Rewiring
    DOI 10.1101/2025.05.30.657104
    Type Preprint
    Author Bellamy C
    Pages 2025.05.30.657104
    Link Publication
  • 2024
    Title A comprehensive study of SARS-CoV-2 main protease (Mpro) inhibitor-resistant mutants selected in a VSV-based system
    DOI 10.1371/journal.ppat.1012522
    Type Journal Article
    Author Costacurta F
    Journal PLOS Pathogens
    Link Publication
  • 2024
    Title Cdk6’s functions are critically regulated by its unique C-terminus
    DOI 10.1016/j.isci.2024.111697
    Type Journal Article
    Author Schirripa A
    Journal iScience
    Pages 111697
    Link Publication
  • 2024
    Title Phosphorylation of the compartmentalized PKA substrate TAF15 regulates RNA–protein interactions
    DOI 10.1007/s00018-024-05204-4
    Type Journal Article
    Author Feichtner A
    Journal Cellular and Molecular Life Sciences
    Pages 162
    Link Publication
  • 2023
    Title Tracking and blocking interdependencies of cellular BRAF-MEK oncokinase activities
    DOI 10.1093/pnasnexus/pgad185
    Type Journal Article
    Author Fleischmann J
    Journal PNAS Nexus
    Link Publication
  • 2024
    Title Impact of protein and small molecule interactions on kinase conformations
    DOI 10.7554/elife.94755
    Type Journal Article
    Author Kugler V
    Journal eLife
    Link Publication
  • 2024
    Title Impact of protein and small molecule interactions on kinase conformations
    DOI 10.7554/elife.94755.3
    Type Journal Article
    Author Kugler V
    Journal eLife
    Link Publication
  • 2024
    Title Highly specific SARS-CoV-2 main protease (Mpro) mutations against the clinical antiviral ensitrelvir selected in a safe, VSV-based system
    DOI 10.1016/j.antiviral.2024.105969
    Type Journal Article
    Author Rauch S
    Journal Antiviral Research
    Pages 105969
    Link Publication
  • 2024
    Title Kinases in motion: impact of protein and small molecule interactions on kinase conformations
    DOI 10.1101/2024.01.11.575270
    Type Preprint
    Author Kugler V
    Pages 2024.01.11.575270
    Link Publication

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