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Magnetic Resonance Fingerprinting of Patients with Gliomas

Magnetic Resonance Fingerprinting of Patients with Gliomas

Siegfried Trattnig (ORCID: 0000-0003-1623-3303)
  • Grant DOI 10.55776/KLI679
  • Funding program Clinical Research
  • Status ended
  • Start June 1, 2018
  • End May 31, 2022
  • Funding amount € 385,639
  • Project website

Disciplines

Clinical Medicine (100%)

Keywords

    MR Fingerprinting, Quantitative Maps, Gliomas, Brain/Central Nervous System Cancers, Magnetic resonance imaging

Abstract Final report

Advanced conventional MR Imaging of brain tumors is mainly based on contrast images and is time consuming. To overcome these limitations MR Fingerprinting (MRF) offers a fundamentally novel approach to data acquisition, post-processing, and visualization in MR using a fast, single MR sequence. MRF uses a single pseudo-randomized acquisition that causes the signals from different tissues to have a unique signal evolution or fingerprint that is simultaneously a function of the multiple tissue properties. The postprocessing involves a pattern-matching algorithm to identify the fingerprints with the closest match in a predefined dictionary of predicted signal evolutions that can then be translated into quantitative maps. From these MRF derived T1 and T2 relaxation times can be used to generate synthetic contrast images. Our hypothesis is that MRF will offer a fast single sequence for the evaluation of brain tumors which may replace several conventional MR sequences, so far used in an advanced brain tumor protocol. The simultaneously acquired T1 and T2 maps may offer information on the grade and extension of gliomas, which so far can only be gained from a conventional advanced brain tumor protocol. In the follow-up study an enhanced detection rate of recurrent tumor in high grade gliomas should be possible by MRF. Methods to proof these hypotheses will comprise the following phases: 1) Phantom testing of the MRF acquired T1 and T2 relaxation times and the conventionally acquired T1 and T2 relaxation times 2) in vivo application of the validated MRF sequence and protocol optimization on 10 volunteers. 3) in vivo application of MRF on 50 patients with low-and high grade gliomas: Validation of MR based evaluation on tumor, the tumor surrounding tissue and normal appearing brain tissue with histological specimen analyses derived from surgery. MRF-obtained T1 and T2 relaxation times in one sequence of 5 minutes will be compared to conventional advanced MRI tumor protocol which takes about 60 minutes. -1-

Advanced conventional MR Imaging of brain tumors is mainly based on contrast images and is time consuming. To overcome these limitations MR Fingerprinting (MRF) offers a fundamentally novel approach to data acquisition, post-processing, and visualization in MR using a fast, single MR sequence. MRF uses a single pseudo-randomized acquisition that causes the signals from different tissues to have a unique signal evolution or 'fingerprint' that is simultaneously a function of the multiple tissue properties. The postprocessing involves a pattern-matching algorithm to identify the fingerprints with the closest match in a predefined dictionary of predicted signal evolutions that can then be translated into quantitative maps. These MRF derived T1 and T2 relaxation times can be used to generate synthetic contrast images. In this project together with Siemens Healthineers an optimized MRF sequence for neuro applications was developed, implemented and applied in a clinical trial. An important finding in this project was the detection of motion sensitivity with the MRF sequence and the development of strategies to visualize and overcome these artefacts, which were internationally not known before. Co-registration between images acquired during MRF session and an advanced tumour protocol session with multiple sequences and quantitative assessment was performed in a collective group of 35 measured patients with histological results from biopsies and surgeries as a standard of reference Similarity between relaxation times derived from MRF and conventional techniques was evaluated. As expected, high correlations between MRF T1 and T2 and the respective conventional quantitative MR techniques could be demonstrated. Evaluation of pathological tissues of interest on the co-registered images with respect to the quantitative tissue parameters has been performed in four regions: solid part of the tumour, perifocal oedema, perilesional normal appearing white matter, and contralateral white matter of the frontal lobe with the result of a clear differentiation of these tissues by MRF derived parameters. Furthermore, it could be shown that MRF T1 and T2 values of solid tumour parts were significantly higher in IDH-mutant tumours than in IDH-wildtype suggesting the potential of using non-invasive MR imaging, particularly MRF-derived T1 and T2 relaxation values, as a biomarker for differentiating gliomas with respect to their IDH mutationan important influencing factor for individual therapy planning and prognosis. Additionally we have investigated the relationship between within-pathology MR relaxation values acquired with MRF and other metabolic imaging methods such as Positron Emission Tomography (PET) and MR spectroscopy at 7 Tesla in the same cohort of patients. The comparison MRF with PET has shown that both MRF and PET provide quantitative measurements with high predictability on grading and subtumour regions of gliomas. Nonetheless, results were not similar, reflecting the different underlying mechanisms of each method.

Research institution(s)
  • Medizinische Universität Wien - 100%
International project participants
  • Mark A. Griswold, Case Western Reserve University - USA
  • Vikas Gulani, Case Western Reserve University - USA

Research Output

  • 686 Citations
  • 28 Publications
  • 1 Fundings
Publications
  • 2023
    Title Evaluation of Gliomas with Magnetic Resonance Fingerprinting with PET Correlation-A Comparative Study.
    DOI 10.3390/cancers15102740
    Type Journal Article
    Author Cardoso Pl
    Journal Cancers
  • 2019
    Title Reproducibility and Repeatability of MR Fingerprinting Relaxometry in the Human Brain
    DOI 10.1148/radiol.2019182360
    Type Journal Article
    Author Körzdörfer G
    Journal Radiology
    Pages 429-437
  • 2023
    Title A comparison of 7 Tesla MR spectroscopic imaging and 3 Tesla MR fingerprinting for tumor localization in glioma patients
    DOI 10.48550/arxiv.2304.05254
    Type Other
    Author Cardoso P
    Link Publication
  • 2024
    Title 7 Tesla magnetic resonance spectroscopic imaging predicting IDH status and glioma grading.
    DOI 10.1186/s40644-024-00704-9
    Type Journal Article
    Author Cadrien C
    Journal Cancer imaging : the official publication of the International Cancer Imaging Society
    Pages 67
  • 2024
    Title A Comparison of 7 Tesla MR Spectroscopic Imaging and 3 Tesla MR Fingerprinting for Tumor Localization in Glioma Patients.
    DOI 10.3390/cancers16050943
    Type Journal Article
    Author Lazen P
    Journal Cancers
  • 2022
    Title MR Fingerprinting—A Radiogenomic Marker for Diffuse Gliomas
    DOI 10.3390/cancers14030723
    Type Journal Article
    Author Springer E
    Journal Cancers
    Pages 723
    Link Publication
  • 2021
    Title Improved susceptibility weighted imaging at ultra-high field using bipolar multi-echo acquisition and optimized image processing: CLEAR-SWI
    DOI 10.1016/j.neuroimage.2021.118175
    Type Journal Article
    Author Eckstein K
    Journal NeuroImage
    Pages 118175
    Link Publication
  • 2021
    Title Modified amino-dextrans as carriers of Gd-chelates for retrograde transport and visualization of peripheral nerves by magnetic resonance imaging (MRI)
    DOI 10.1016/j.jinorgbio.2021.111495
    Type Journal Article
    Author Pashkunova-Martic I
    Journal Journal of Inorganic Biochemistry
    Pages 111495
  • 2021
    Title Long-term evolution of multiple sclerosis iron rim lesions in 7 T MRI
    DOI 10.1093/brain/awaa436
    Type Journal Article
    Author Dal-Bianco A
    Journal Brain
    Pages 833-847
    Link Publication
  • 2021
    Title Effects of SSRI treatment on GABA and glutamate levels in an associative relearning paradigm
    DOI 10.1016/j.neuroimage.2021.117913
    Type Journal Article
    Author Spurny B
    Journal NeuroImage
    Pages 117913
    Link Publication
  • 2021
    Title Reliability of the MOCART (Magnetic Resonance Observation of Cartilage Repair Tissue) 2.0 knee score for different cartilage repair techniques—a retrospective observational study
    DOI 10.1007/s00330-021-07688-1
    Type Journal Article
    Author Schreiner M
    Journal European Radiology
    Pages 5734-5745
    Link Publication
  • 2021
    Title Histological Analysis of Cartilage Defects Repaired with an Autologous Human Stem Cell Construct 48 Weeks Postimplantation Reveals Structural Details Not Detected by T2-Mapping MRI
    DOI 10.1177/1947603521989423
    Type Journal Article
    Author Shimomura K
    Journal CARTILAGE
    Link Publication
  • 2021
    Title Tissue Sodium Concentration Quantification at 7.0-T MRI as an Early Marker for Chemotherapy Response in Breast Cancer: A Feasibility Study
    DOI 10.1148/radiol.2021201600
    Type Journal Article
    Author Zaric O
    Journal Radiology
    Pages 63-72
  • 2021
    Title Inter-subject stability and regional concentration estimates of 3D-FID-MRSI in the human brain at 7 T
    DOI 10.1002/nbm.4596
    Type Journal Article
    Author Hangel G
    Journal NMR in Biomedicine
    Link Publication
  • 2021
    Title Concentration of Gallbladder Phosphatidylcholine in Cholangiopathies: A Phosphorus-31 Magnetic Resonance Spectroscopy Pilot Study
    DOI 10.1002/jmri.27817
    Type Journal Article
    Author Pfleger L
    Journal Journal of Magnetic Resonance Imaging
    Pages 530-540
  • 2021
    Title Differentiation of Cartilage Repair Techniques Using Texture Analysis from T2 Maps
    DOI 10.1177/19476035211029698
    Type Journal Article
    Author Juras V
    Journal CARTILAGE
    Link Publication
  • 2020
    Title Gluconeogenesis, But Not Glycogenolysis, Contributes to the Increase in Endogenous Glucose Production by SGLT-2 Inhibition.
    DOI 10.2337/dc20-1983
    Type Journal Article
    Author Wolf P
    Journal Diabetes care
    Pages 541-548
    Link Publication
  • 2020
    Title Simultaneous Multiple Resonance Frequency imaging (SMURF): Fat-water imaging using multi-band principles
    DOI 10.1002/mrm.28519
    Type Journal Article
    Author Bachrata B
    Journal Magnetic Resonance in Medicine
    Pages 1379-1396
    Link Publication
  • 2020
    Title Cutaneous nerve fields of the anteromedial lower limb—Determination with selective ultrasound-guided nerve blockade
    DOI 10.1002/ca.23582
    Type Journal Article
    Author Riegler G
    Journal Clinical Anatomy
    Pages 11-18
    Link Publication
  • 2020
    Title Impact of concentration and dilution of three macrocyclic gadolinium-based contrast agents on MRI signal intensity at 1.5T and 3T and different pulse sequences: results of a phantom study in human plasma
    DOI 10.1177/0284185120915674
    Type Journal Article
    Author Szomolanyi P
    Journal Acta Radiologica
    Pages 51-57
  • 2020
    Title Clinical implementation of accelerated T2 mapping: Quantitative magnetic resonance imaging as a biomarker for annular tear and lumbar disc herniation
    DOI 10.1007/s00330-020-07538-6
    Type Journal Article
    Author Raudner M
    Journal European Radiology
    Pages 3590-3599
    Link Publication
  • 2020
    Title Phase unwrapping with a rapid opensource minimum spanning tree algorithm (ROMEO)
    DOI 10.1002/mrm.28563
    Type Journal Article
    Author Dymerska B
    Journal Magnetic Resonance in Medicine
    Pages 2294-2308
    Link Publication
  • 2020
    Title Compressed sensing and the use of phased array coils in 23Na MRI: a comparison of a SENSE-based and an individually combined multi-channel reconstruction
    DOI 10.1016/j.zemedi.2020.10.003
    Type Journal Article
    Author Lachner S
    Journal Zeitschrift für Medizinische Physik
    Pages 48-57
  • 2020
    Title Real-time motion and retrospective coil sensitivity correction for CEST using volumetric navigators (vNavs) at 7T
    DOI 10.1002/mrm.28555
    Type Journal Article
    Author Rodriguez E
    Journal Magnetic Resonance in Medicine
    Pages 1909-1923
    Link Publication
  • 2020
    Title 7T Epilepsy Task Force Consensus Recommendations on the Use of 7T MRI in Clinical Practice.
    DOI 10.1212/wnl.0000000000011413
    Type Journal Article
    Author Opheim G
    Journal Neurology
    Pages 327-341
    Link Publication
  • 2021
    Title Investigating the effect of trigger delay on cardiac 31P MRS signals
    DOI 10.1038/s41598-021-87063-8
    Type Journal Article
    Author Wampl S
    Journal Scientific Reports
    Pages 9268
    Link Publication
  • 2021
    Title The Vienna morphological Achilles tendon score—VIMATS
    DOI 10.1007/s00508-021-01863-6
    Type Journal Article
    Author Apprich S
    Journal Wiener klinische Wochenschrift
    Pages 560-567
    Link Publication
  • 2020
    Title In Vivo 1H MR Spectroscopy of Biliary Components of Human Gallbladder at 7T
    DOI 10.1002/jmri.27207
    Type Journal Article
    Author Gajdošík M
    Journal Journal of Magnetic Resonance Imaging
    Pages 98-107
    Link Publication
Fundings
  • 2021
    Title 3T MR Fingerprinting of Early Stage OA Patients
    Type Other
    Start of Funding 2021
    Funder Austrian Science Fund (FWF)

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