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Enzymology of Xylose Utilization in Yeast

Enzymology of Xylose Utilization in Yeast

Bernd Nidetzky (ORCID: 0000-0002-5030-2643)
  • Grant DOI 10.55776/P12569
  • Funding program Principal Investigator Projects
  • Status ended
  • Start April 1, 1998
  • End June 30, 2002
  • Funding amount € 71,510

Disciplines

Biology (67%); Chemistry (33%)

Keywords

    ALDOSE REDUCTASE, XYLITOL DEHYDROGENASE, SUBSTRATE ANALOG, OPEN-CHAIN SUGAR, BINDING AND CATALYSIS, BINDING ENERGY

Final report

Xylose is a major constituent sugar of the polysaccharide fraction of plant biomass. Forestry and agriculture produce huge annual amounts of xylose equivalents as waste products that are not well utilized at the present time. Micro-organisms are capable of producing a range of value-added chemicals from xylose. The biological conversion of xylose into ethanol is most interestig considering the exploitation of renewable resources for car fuel production. Baker`s yeast is a well known producer of ethanol and its current process technology reflects a decades-long optimization, step by step. Unfortunately, baker`s yeast cannot utilize xylose because it lacks the metabolic components required. An important goal of research worldwide is, therefore, to generate an engineered baker`s yeast with improved metabolic capabilities. Metabolic engineering on the basis of modern gene technology is promising means of accomplishing this ambitious task. Detailed knowledge of structure-function relationships of key enzymes involved in xylose utilisation, namely xylose reductase and xylitol dehydrogenase, is of paramount importance to design and finely tune xylose metabolism. Understanding the function of these enzymes within the context of the cellular environment is another major issue. This project has provided novel insights into how xylose reductase and xylitol dehydrogenase work and shown routes for modification of the properties of the enzymes, particularly xylose reductase. The experimental approach has been a multidisciplinary one which included biochemistry, biotechnology, structural chemistry, and organic chemistry in national and international collaborations.

Research institution(s)
  • Universität für Bodenkultur Wien - 100%
Project participants
  • Arnold E. Stütz, Technische Universität Graz , associated research partner

Research Output

  • 183 Citations
  • 9 Publications
Publications
  • 2003
    Title Characterization of recombinant xylitol dehydrogenase from Galactocandida mastotermitis expressed in Escherichia coli
    DOI 10.1016/s0009-2797(02)00215-6
    Type Journal Article
    Author Nidetzky B
    Journal Chemico-Biological Interactions
    Pages 533-542
  • 2003
    Title Crystal structure of Pseudomonas fluorescens mannitol 2-dehydrogenase: evidence for a very divergent long-chain dehydrogenase family
    DOI 10.1016/s0009-2797(02)00218-1
    Type Journal Article
    Author Kavanagh K
    Journal Chemico-Biological Interactions
    Pages 551-558
  • 2003
    Title Altering dimer contacts in xylose reductase from Candida tenuis by site-directed mutagenesis: structural and functional properties of R180A mutant
    DOI 10.1016/s0009-2797(02)00213-2
    Type Journal Article
    Author Klimacek M
    Journal Chemico-Biological Interactions
    Pages 523-532
  • 2003
    Title Pseudomonas fluorescens mannitol 2-dehydrogenase and the family of polyol-specific long-chain dehydrogenases/reductases: sequence-based classification and analysis of structure–function relationships
    DOI 10.1016/s0009-2797(02)00219-3
    Type Journal Article
    Author Klimacek M
    Journal Chemico-Biological Interactions
    Pages 559-582
  • 2003
    Title The xylose reductase (AKR2B5) structure: homology and divergence from other aldo–keto reductases and opportunities for protein engineering
    DOI 10.1016/s0009-2797(02)00211-9
    Type Journal Article
    Author Wilson D
    Journal Chemico-Biological Interactions
    Pages 515-521
  • 2001
    Title Structural and functional properties of aldose xylose reductase from the d-xylose-metabolizing yeast Candida tenuis
    DOI 10.1016/s0009-2797(00)00285-4
    Type Journal Article
    Author Nidetzky B
    Journal Chemico-Biological Interactions
    Pages 583-595
  • 2001
    Title Exploring the active site of yeast xylose reductase by site-directed mutagenesis of sequence motifs characteristic of two dehydrogenase/reductase family types
    DOI 10.1016/s0014-5793(01)02609-6
    Type Journal Article
    Author Klimacek M
    Journal FEBS Letters
    Pages 149-152
    Link Publication
  • 2000
    Title Synthesis of 5,6-dimodified open-chain d-fructose derivatives and their properties as substrates of bacterial polyol dehydrogenase
    DOI 10.1016/s0957-4166(99)00526-1
    Type Journal Article
    Author Hadwiger P
    Journal Tetrahedron: Asymmetry
    Pages 607-620
  • 2000
    Title d-Xylose metabolism by Candida intermedia: isolation and characterisation of two forms of aldose reductase with different coenzyme specificities
    DOI 10.1016/s0378-4347(99)00380-1
    Type Journal Article
    Author Mayr P
    Journal Journal of Chromatography B: Biomedical Sciences and Applications
    Pages 195-202

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