Neuronal RNA granules and their functions at the synapse
Neuronal RNA granules and their functions at the synapse
Disciplines
Biology (75%); Medical-Theoretical Sciences, Pharmacy (25%)
Keywords
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Dendritic RNA localization,
Exon junction complex/EJC,
Neuronal RNA granules/RNPs,
Live imaging of RNA transport,
Double-stranded RNA binding protein,
Mrna Stability/Degradation
Certain neuronal mRNAs are transported to dendrites, where their local translation contributes to synaptic plasticity, learning and memory. Defects in RNA localization can have severe consequences for the function of cells as documented for human diseases including fragile X mental retardation, spinal muscular atrophy, and myotonic dystrophy. Transport of RNAs to dendrites and synapses is thought to occur in ribonucleoprotein particles (RNPs), however, little is known about the underlying components and their functions in mRNA localization. We propose to isolate functional RNA transport RNPs from rat neurons. Known particle components such as Staufen1, Staufen2, and Barentsz serve as molecular `handles` and as markers to unravel the molecular composition of these neuronal RNA granules. The functions of newly identified components, including previously known localization factors, as well as new factors and RNA cargoes, will be characterized in detail at the cellular and molecular level using a battery of in vivo and in vitro functional assays. We expect that this thorough analysis will greatly advance the mechanistic understanding of dendritic RNA localization and its contribution to learning and memory at the synapse.
Certain neuronal mRNAs are transported to dendrites, where their local translation contributes to synaptic plasticity, learning and memory. Defects in RNA localization can have severe consequences for the function of cells as documented for human diseases including fragile X mental retardation, spinal muscular atrophy, and myotonic dystrophy. Transport of RNAs to dendrites and synapses is thought to occur in ribonucleoprotein particles (RNPs), however, little is known about the underlying components and their functions in mRNA localization. We propose to isolate functional RNA transport RNPs from rat neurons. Known particle components such as Staufen1, Staufen2, and Barentsz serve as molecular "handles" and as markers to unravel the molecular composition of these neuronal RNA granules. The functions of newly identified components, including previously known localization factors, as well as new factors and RNA cargoes, will be characterized in detail at the cellular and molecular level using a battery of in vivo and in vitro functional assays. We expect that this thorough analysis will greatly advance the mechanistic understanding of dendritic RNA localization and its contribution to learning and memory at the synapse.
Research Output
- 1057 Citations
- 12 Publications
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2017
Title A retained intron in the 3'-UTR of Calm3 mRNA mediates its Staufen2- and activity-dependent localization to neuronal dendrites DOI 10.15252/embr.201744334 Type Journal Article Author Sharangdhar T Journal The EMBO Reports Link Publication -
2011
Title Mechanisms of dendritic mRNA transport and its role in synaptic tagging DOI 10.1038/emboj.2011.278 Type Journal Article Author Doyle M Journal The EMBO Journal Pages 3540-3552 Link Publication -
2011
Title Independent localization of MAP2, CaMKIIa and ß-actin RNAs in low copy numbers DOI 10.1038/embor.2011.149 Type Journal Article Author Mikl M Journal The EMBO Reports Pages 1077-1084 Link Publication -
2012
Title A zipcode unzipped DOI 10.1101/gad.184945.111 Type Journal Article Author Doyle M Journal Genes & Development Pages 110-113 Link Publication -
2012
Title RNA-binding proteins involved in RNA localization and their implications in neuronal diseases DOI 10.1111/j.1460-9568.2012.08160.x Type Journal Article Author Tolino M Journal European Journal of Neuroscience Pages 1818-1836 -
2009
Title What are the roles of microRNAs at the mammalian synapse? DOI 10.1016/j.neulet.2009.06.050 Type Journal Article Author Konecna A Journal Neuroscience Letters Pages 63-68 -
2008
Title A loss of function allele for murine Staufen1 leads to impairment of dendritic Staufen1-RNP delivery and dendritic spine morphogenesis DOI 10.1073/pnas.0804583105 Type Journal Article Author Vessey J Journal Proceedings of the National Academy of Sciences Pages 16374-16379 Link Publication -
2013
Title Staufen2 Regulates Neuronal Target RNAs DOI 10.1016/j.celrep.2013.11.039 Type Journal Article Author Heraud-Farlow J Journal Cell Reports Pages 1511-1518 Link Publication -
2013
Title Interactome of Two Diverse RNA Granules Links mRNA Localization to Translational Repression in Neurons DOI 10.1016/j.celrep.2013.11.023 Type Journal Article Author Fritzsche R Journal Cell Reports Pages 1749-1762 Link Publication -
2010
Title RNA localization in neurite morphogenesis and synaptic regulation: current evidence and novel approaches DOI 10.1007/s00359-010-0520-x Type Journal Article Author Mikl M Journal Journal of Comparative Physiology A Pages 321-334 Link Publication -
2010
Title Dendritically Localized Transcripts Are Sorted into Distinct Ribonucleoprotein Particles That Display Fast Directional Motility along Dendrites of Hippocampal Neurons DOI 10.1523/jneurosci.3537-09.2010 Type Journal Article Author Tübing F Journal The Journal of Neuroscience Pages 4160-4170 Link Publication -
2010
Title Mammalian Pumilio 2 regulates dendrite morphogenesis and synaptic function DOI 10.1073/pnas.0907128107 Type Journal Article Author Vessey J Journal Proceedings of the National Academy of Sciences Pages 3222-3227 Link Publication