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Cracking the Actin Nanomotor by 3D ElectronMicroscopy

Cracking the Actin Nanomotor by 3D ElectronMicroscopy

J. Victor Small (ORCID: )
  • Grant DOI 10.55776/P21292
  • Funding program Principal Investigator Projects
  • Status ended
  • Start April 1, 2009
  • End March 31, 2013
  • Funding amount € 397,656
  • Project website

Disciplines

Biology (95%); Nanotechnology (5%)

Keywords

    Cytoskeleton, Actin Filaments, Lamellipodia, Adhesion, Electron Microscopy, Tomography

Abstract Final report

The primary goal of this project is to determine the 3-dimensional architecture of actin filament arrays that function in actin-based motility. So why is this important? Actin filaments drive the movement of migrating cells during tissue development and repair and of tumour cells during metastasis. Pathogens, including Listeria monocytogenes and vaccinia virus use actin to propel themselves from infected cells to uninfected cells, out of sight of the immune system. Thus, resolving the mechanism of actin driven motility is essential to understand both normal and disease processes. Actin polymerization is initiated at membrane surfaces, in lamellipodia, by specific nucleators (the Arp2/3 complex and formins) and potentiated by other factors, such as Ena/VASP proteins. But how is the actin network of lamellipodia organized and cross-linked and what structural rearrangements accompany anchorage with the extracellular matrix, necessary for traction? Likewise, do pathogens use the rules of lamellipodia to move in cytoplasm? These questions can only be answered by acquiring 3-dimensional structural information about actin network architecture and the actin-membrane interface under conditions that faithfully preserve actin filaments. Three innovations are proposed to achieve these aims: 1) Deep stain electron microscope tomography: we recently discovered that for cells embedded in deep negative stain, three-dimensionality and actin filament substructure is preserved in lamellipodia. We will exploit this new technology to resolve lamellipodia architecture. 2) Nanowire driven motility. In a multidisciplinary endeavour, we will use nanowires (10nm in diameter) pushed by actin filaments in vitro for structural analysis of the actin motor. In parallel, we will apply the deep negative stain method/ 3D imaging to vaccinia virus infected cells to resolve the pathogen pushing machinery. 3) Correlated live cell imaging and cryo-electron tomography. We will develop a unique approach to catch cells, vitreously frozen in known phase of protrusive activity for structural analysis. New insights can be expected into the structural basis of actin-based motility and, in turn, into the fundamental processes underlying cell migration.

There is no life without movement, at all levels of metazoan organization, from individual cells to the animal form. During development, individual cells migrate from the germ layers to lay down the body plan and in the adult organism migrating cells play key roles in immune defense and tissue repair. Pathological processes, including tumor dissemination and atherosclerosis, likewise involve cell migration. A central player in these motile processes is the protein actin and our studies have focused on understanding the mechanisms by which actin produces movement. Actin is not however used exclusively by cells to move. Several bacterial and viral pathogens hijack the actin machinery of cells they infect to disseminate their infection. They do this by recruiting actin and co-factors to propel them in cytoplasm in a rocketing type regime, at the head of an actin comet tail, to jump from one cell to another, avoiding the surveillance of the immune system. The major aim of the project was to discover how cells use actin filaments to move. In this mission we exploited the new technology of electron microscope tomography (electron tomography), which allows resolution of the three dimensional arrangement of subcellular structures at nm resolution. Using a combination of light microscopy and electron tomography we have discovered how actin filaments initiate and form the sheet-like regions (lamellipodia) that lead moving cells. In brief, lamellipodia are composed of networks of filaments generated by protein complexes that initiate and stabilize branch points in the network. Mathematical models have also been developed to simulate lamellipodia formation.To investigate the process of actin-dependent pathogen invasion we have focused on members of the baculovirus family of insect viruses, which are among the smallest pathogens propelled by actin, and thus best suited for high- resolution imaging. Like other pathogens that hijack the actin-based motile machinery, baculoviruses generate actin comet tails to move in infected cells and we have used electron tomography to resolve comet tail architecture. We have provided the first three dimensional images of comet tails, showing that propulsion is based on a fish-bone like array of actin filaments, with branch linkages between filaments like those found in lamellipodia. A mathematical model of pathogen movement has also been developed that simulates the observed structure of comet tails and the tracking movements of viruses in infected cells. Taken together, our findings on the organizations of actin filaments in different motile assemblies have contributed new insights into how the forces of actin polymerization are used to push in biological processes. Our lead in electron tomography of the cytoskeleton has also been exploited in several other collaborations to resolve the roles of different proteins and protein complexes in actin-based processes.

Research institution(s)
  • IMBA – Institut für Molekulare Biotechnologie GmbH - 100%
International project participants
  • Marie-France Carlier, CNRS Gif-sur-Yvette - France
  • Jan Faix, Medizinische Hochschule Hannover - Germany

Research Output

  • 1382 Citations
  • 19 Publications
Publications
  • 2014
    Title MTSS1 is a metastasis driver in a subset of human melanomas
    DOI 10.1038/ncomms4465
    Type Journal Article
    Author Mertz K
    Journal Nature Communications
    Pages 3465
    Link Publication
  • 2014
    Title Electron Tomography and Simulation of Baculovirus Actin Comet Tails Support a Tethered Filament Model of Pathogen Propulsion
    DOI 10.1371/journal.pbio.1001765
    Type Journal Article
    Author Mueller J
    Journal PLoS Biology
    Link Publication
  • 2011
    Title Cofilin cooperates with fascin to disassemble filopodial actin filaments
    DOI 10.1242/jcs.086934
    Type Journal Article
    Author Breitsprecher D
    Journal Journal of Cell Science
    Pages 3305-3318
    Link Publication
  • 2011
    Title Molecular mechanism of Ena/VASP-mediated actin-filament elongation
    DOI 10.1038/emboj.2010.348
    Type Journal Article
    Author Breitsprecher D
    Journal The EMBO Journal
    Pages 456-467
    Link Publication
  • 2010
    Title Chapter 22 The Actin Cytoskeleton in Whole Mount Preparations and Sections
    DOI 10.1016/s0091-679x(10)96022-6
    Type Book Chapter
    Author Resch G
    Publisher Elsevier
    Pages 529-564
  • 2010
    Title Elementary Cellular Processes Driven by Actin Assembly: Lamellipodia and Filopodia
    DOI 10.1007/978-90-481-9301-1_1
    Type Book Chapter
    Author Small J
    Publisher Springer Nature
    Pages 3-33
  • 2010
    Title Electron tomography reveals unbranched networks of actin filaments in lamellipodia
    DOI 10.1038/ncb2044
    Type Journal Article
    Author Urban E
    Journal Nature Cell Biology
    Pages 429-435
  • 2010
    Title Dicing with dogma: de-branching the lamellipodium
    DOI 10.1016/j.tcb.2010.08.006
    Type Journal Article
    Author Small J
    Journal Trends in Cell Biology
    Pages 628-633
    Link Publication
  • 2010
    Title Cell migration.
    Type Book Chapter
    Author Encyclopedia Of Biological Chemistry
  • 2013
    Title Inhibitory signalling to the Arp2/3 complex steers cell migration
    DOI 10.1038/nature12611
    Type Journal Article
    Author Dang I
    Journal Nature
    Pages 281-284
    Link Publication
  • 2013
    Title Arp2/3 complex is essential for actin network treadmilling as well as for targeting of capping protein and cofilin
    DOI 10.1091/mbc.e12-12-0857
    Type Journal Article
    Author Koestler S
    Journal Molecular Biology of the Cell
    Pages 2861-2875
    Link Publication
  • 2012
    Title Actin branching in the initiation and maintenance of lamellipodia
    DOI 10.1242/jcs.107623
    Type Journal Article
    Author Vinzenz M
    Journal Journal of Cell Science
    Pages 2775-2785
    Link Publication
  • 2012
    Title ADF/Cofilin-Mediated Actin Retrograde Flow Directs Neurite Formation in the Developing Brain
    DOI 10.1016/j.neuron.2012.09.038
    Type Journal Article
    Author Flynn K
    Journal Neuron
    Pages 1091-1107
    Link Publication
  • 2012
    Title Reconstructing the orientation distribution of actin filaments in the lamellipodium of migrating keratocytes from electron microscopy tomography data
    DOI 10.1002/cyto.a.22050
    Type Journal Article
    Author Weichsel J
    Journal Cytometry Part A
    Pages 496-507
  • 2012
    Title Direct Determination of Actin Polarity in the Cell
    DOI 10.1016/j.jmb.2012.03.015
    Type Journal Article
    Author Narita A
    Journal Journal of Molecular Biology
    Pages 359-368
    Link Publication
  • 2012
    Title Actin filament tracking in electron tomograms of negatively stained lamellipodia using the localized radon transform
    DOI 10.1016/j.jsb.2012.02.011
    Type Journal Article
    Author Winkler C
    Journal Journal of Structural Biology
    Pages 19-28
  • 2011
    Title Reply: Visualizing branched actin filaments in lamellipodia by electron tomography
    DOI 10.1038/ncb2322
    Type Journal Article
    Author Small J
    Journal Nature Cell Biology
    Pages 1013-1014
  • 2011
    Title Microtubules as Platforms for Assaying Actin Polymerization In Vivo
    DOI 10.1371/journal.pone.0019931
    Type Journal Article
    Author Oelkers J
    Journal PLoS ONE
    Link Publication
  • 2011
    Title Immersion Freezing of Suspended Particles and Cells for Cryo-Electron Microscopy
    DOI 10.1101/pdb.prot5642
    Type Journal Article
    Author Resch G
    Journal Cold Spring Harbor Protocols
    Link Publication

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