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How Dynamic Changes in Leaf Anatomy affect Photosynthesis

Daniel Tholen (ORCID: 0000-0002-9517-0939)
  • Grant DOI 10.55776/P30275
  • Funding program Principal Investigator Projects
  • Status ended
  • Start October 1, 2017
  • End March 31, 2022
  • Funding amount € 255,991
  • Project website

Disciplines

Biology (70%); Mathematics (20%); Physics, Astronomy (10%)

Keywords

  • Mesophyll Conductance,
  • Water Deficit,
  • Serial Sectioning,
  • Leaf Anatomy,
  • Photosynthese
Abstract

Plant leaves are intricate organs that show a wide range of variation in form and structure. It has long been recognized that their anatomy is tightly linked to biological function. The most characteristic functions of plant leaves are related to the capture of light and carbon dioxide (CO2) for use in photosynthesis. Photosynthesis is the basis of the world`s food web, and understanding how this process responds to changes in the environment, in particular to a limited water availability, is of great social and economic interest. Much of the recent research has focused on how leaf photosynthesis in response to the environment is determined by biochemical processes. The role of anatomy has proven difficult to describe quantitatively and has often been ignored. Interestingly, recent developments suggest that the leaf anatomy cannot be assumed to be static, but changes rapidly and reversibly in response to a water deficit. Fortunately, this dynamic nature of anatomy provides an unique opportunity to examine the effect of the leaf internal structure on photosynthesis. To this end, leaves of drought- tolerant and sensitive poplar cultivars will be exposed to a water deficit and changes in anatomy, leaf water status and photosynthesis will be closely monitored. In contrast to most earlier work, advanced new microscopy techniques will be employed to analyze the anatomy in three dimensions down to the subcellular level. This will allow for characterization of the leaf anatomy to an unprecedented level of detail. In addition, the resulting three-dimensional representation of the leaf structure makes it possible to describe photosynthesis and the diffusion of CO2 through the leaf using a mechanistic model of the biophysical processes involved. The proposed experiments will clarify what kind of short-term changes in anatomy are induced by changes in the leaf water status and how such changes correlate with differences in photosynthesis. In combination with a mechanistic model of the photosynthetic process, this will allow for the identification and quantification of key anatomical traits that limit photosynthesis under a water deficit. Such traits may find use in future breeding programs for drought-tolerant plants.

Research institution(s)
  • Universität für Bodenkultur Wien - 100%
International project participants
  • Gilbert Ethier, Université Laval - Canada
  • Bernard Genty, Centre national de la recherche scientifique - France

Research Output

  • 113 Citations
  • 13 Publications
  • 2 Datasets & models
  • 1 Software
  • 1 Disseminations
  • 2 Fundings
Publications
  • 2024
    Title GasanalyzeR: advancing reproducible research using a new R package for photosynthesis data workflows.
    DOI 10.1093/aobpla/plae035
    Type Journal Article
    Author Tholen D
    Journal AoB PLANTS
  • 2023
    Title Stable isotope analysis of atmospheric CO2 using a Gasbench II-Cold Trap-IRMS setting
    DOI 10.1002/rcm.9647
    Type Journal Article
    Author Leitner S
    Journal Rapid Communications in Mass Spectrometry
    Link Publication
  • 2024
    Title Functional Leaf Anatomy and Photosynthesis: A Call for Quantitative Approaches
    Type Postdoctoral Thesis
    Author Daniel Tholen
  • 2023
    Title Analyzing anatomy over three dimensions unpacks the differences in mesophyll diffusive area between sun and shade Vitis vinifera leaves
    DOI 10.1093/aobpla/plad001
    Type Journal Article
    Author Théroux-Rancourt G
    Journal AoB PLANTS
    Link Publication
  • 2024
    Title Distance Transform in Images and Connected Plane Graphs
    DOI 10.1007/978-3-031-54726-3_2
    Type Book Chapter
    Author Banaeyan M
    Publisher Springer Nature
    Pages 19-32
  • 2023
    Title Redundant 1-cells in Multi-labeled 2-Gmap Irregular Pyramids
    DOI 10.3217/978-3-85125-954-4-01
    Type Other
    Author Banaeyan
    Link Publication
  • 2023
    Title Towards Uncertainty Detection in Automated Leaf Tissue Segmentation
    DOI 10.3217/978-3-85125-954-4-07
    Type Other
    Author Grexova
    Link Publication
  • 2023
    Title An unsupervised, shape-based 3d cell instance segmentation method for plant tissues
    DOI 10.3217/978-3-85125-954-4-08
    Type Other
    Author Palmrich
    Link Publication
  • 2021
    Title Supplementary Information from Maximum CO2 diffusion inside leaves is limited by the scaling of cell size and genome size
    DOI 10.6084/m9.figshare.13889506.v1
    Type Journal Article
    Author Roddy A
    Link Publication
  • 2020
    Title Maximum CO2 diffusion inside leaves is limited by the scaling of cell size and genome size
    DOI 10.1101/2020.01.16.904458
    Type Preprint
    Author Théroux-Rancourt G
    Pages 2020.01.16.904458
    Link Publication
  • 2021
    Title Maximum CO2 diffusion inside leaves is limited by the scaling of cell size and genome size
    DOI 10.1098/rspb.2020.3145
    Type Journal Article
    Author Théroux-Rancourt G
    Journal Proceedings of the Royal Society B
    Pages 20203145
    Link Publication
  • 2022
    Title Leaf Structure and Function in Four Dimensions: Non-invasive MicroCT Imaging During Gas-exchange Measurements
    DOI 10.5194/egusphere-egu22-9801
    Type Journal Article
    Author Tholen D
  • 2019
    Title Shape matters: the pitfalls of analyzing mesophyll anatomy
    DOI 10.1111/nph.16360
    Type Journal Article
    Author Théroux-Rancourt G
    Journal New Phytologist
    Pages 2239-2242
    Link Publication
Datasets & models
  • 2022 Link
    Title MicroCT scans of a hybrid poplar leaf dehydrating, with annotated slices for model training
    DOI 10.5281/zenodo.7120568
    Type Database/Collection of data
    Public Access
    Link Link
  • 2022 Link
    Title MicroCT scans of sun and shade grown leaves of Cabernet Sauvignon and Blaufränkisch grapevine (Vitis vinifera L.) cultivars
    DOI 10.5281/zenodo.5994662
    Type Database/Collection of data
    Public Access
    Link Link
Software
  • 2020 Link
    Title R package for handlihg and analyzing gas-exchange data
    DOI 10.32614/cran.package.gasanalyzer
    Link Link
Disseminations
  • 2020 Link
    Title Interview
    Type A press release, press conference or response to a media enquiry/interview
    Link Link
Fundings
  • 2020
    Title Leaves in 3D: photosynthesis and water-use efficiency.
    Type Research grant (including intramural programme)
    Start of Funding 2020
    Funder Australian Research Council
  • 2020
    Title Water's gateway to heaven: 3D imaging and modeling of transient stomatal responses in plant leaves under dynamic environments
    Type Research grant (including intramural programme)
    Start of Funding 2020
    Funder Vienna Science and Technology Fund

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