Plant Surfaces and Interfaces in Plants: Lignin, Suberin and Cutin
Plant Surfaces and Interfaces in Plants: Lignin, Suberin and Cutin
Disciplines
Biology (30%); Agriculture and Forestry, Fishery (40%); Materials Engineering (30%)
Keywords
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Plant Cell Wall,
Lignin,
Xylem,
Suberin,
Cuticula,
Raman Microscopy
As plants evolved from aquatic to terrestrial environment complex phenolic compounds (lignin) and natural polyesters (cutin, suberin) have played a major role by building hydrophobic surfaces and interfaces. The deposition of lignin as an additional interface between the cellulose microfibrils and hemicelluloses has been essential for the functioning of the developed water conducting elements (xylem) and for mechanical strength to reach considerable heights. The outermost surfaces had to be adapted to regulate water loss, which has been achieved by suberisation (stem, root) and cutinisation (leaf). Although general principles on the three compounds are known, they are the least understood plant polymers due to their high variability in amount and structure and still unresolved questions regarding polymerisation. Adaptation to survive in the great variety of habitats has resulted in quite diverse body plans that require highly specialized tissues with distinct properties and functions. These are achieved by changing composition and structure at the different hierarchical levels (mm-m-nm) and there is still a huge knowledge gap on the microchemistry and nanostructure of the native cell walls and its interfaces and surfaces. We will bridge this gap by application of non-destructive Raman imaging and Atomic force microscopy (AFM). Raman imaging gives access to the chemical composition on the micro level and AFM complements by elucidating nanostructure and-mechanics. Every Raman image is based on thousands of spectra, each a position resolved (0.3m) molecular fingerprint of the cell wall. Currently only a part of the chemical and structural information in the Raman signature is extracted and we aim at maximising the knowledge gain by applying new multivariate data analysis approaches. To drive the chemical information below the diffraction limit of light for probing tiny plant interfaces and surfaces we will explore the challenging tip-enhanced Raman spectroscopy (TERS) technique. With these sophisticated in-situ approaches we will 1) follow the lignification spatially resolved within the native cell wall to tackle unresolved questions around lignin polymerisation, 2) reveal the chemistry and structure of tracheid and vessel walls on the micro and nano level (including vessel surface and pit membranes) and its implications on hydraulic and mechanical properties 3) investigate the microchemistry and nanostructure of suberized and cutinized layers and its relation to the barrier properties, 4) additionally assess the impact of water stress as drought is becoming more and more a limiting factor for tree growth. New insights into the micro and nano distribution and composition of the plant polymers and as affected by drought stress will be gained and important structure-function relationships revealed. This will break new scientific grounds in the field of plant physiology (plant hydraulics, lipophilic barriers) and wood science (lignification, material properties) and have an impact on optimised plant feedstock development (forestry, agriculture, breeding, genetic engineering) and utilisation (biorefinery, pulp and paper, biopolymers) and probably inspire new biomimetic approaches.
As plants evolved from aquatic to terrestrial environment three complex polymers, lignin, suberin, and cutin, have played a major role. These hydrophobic components impregnate plant surfaces and interfaces to ensure plant survival in a great variety of terrestrial habitats. Plants build tissues with distinct properties and functions by changing composition and structure at the different hierarchical levels (mm-m-nm). Cellulose microfibrils and other carbohydrates build the basis and then aromatic and lipidic components modify plant surfaces and interfaces. These "modifiers" are the least understood plant polymers due to their high variability in amount and structure and unknown distribution and interactions on the micro- and nano-level. In this project we tackled microchemistry of native plant tissues by Raman microscopy. This spectroscopic imaging approach is based on the interaction of laser light with the plants molecules, resulting in the energy of the laser photons being shifted up or down. The energy shift (Raman spectrum) gives information about the vibrational modes and thus molecular structure at any pixel (0.3 x 0.3 m). In each scan, thousands of Raman spectra were acquired and used to calculate chemical images based on univariate and multivariate analysis methods. Especially, unmixing and mixture analysis resulted in the most informative chemical images and purest component spectra. The purest component and multicomponent spectra were compared or fit with spectra of our unique database, which now comprises about 300 plant relevant reference spectra. This enabled us to interpret multicomponent spectra and visualize all components, carbohydrates, aromatics and lipids, at once within the native plant tissues and surfaces on the microscale. Our methodological advances paved the way for new insights into lignification of plant cell walls in different species and mutants and to reveal the impact of lignin on mechanical properties as well as the influence of drought. In plant surfaces, we imaged for the first time phenolic acids as well as flavonoids within the cuticle and at the interface to the epidermal layers, which resulted in new models and a discussion of the role of aromatics in the cuticle. To enlarge the view on the nanoscale, we combined Raman and Atomic force microscopy and with the nanoscale tip "feeling" the surface we succeeded to image nanochemistry in compressed wood based on adhesion values. The results suggested a new more "loose" cell wall model based on flexible lignin nanodomains and advanced our knowledge of the molecular reorganization during wood deformation. Our research opens new scientific grounds in the field of plant physiology and wood science, can have an impact on optimised plant feedstock development (forestry, agriculture, breeding, genetic engineering) as well as utilisation (biorefinery, pulp and paper, biopolymers) and has potential to inspire biomimetic nature based solutions.
- Kurt Fagerstedt, Helsinki University - Finland
- Hermann Höfte, INRA - Centre de recherche de Versailles-Grignon - France
- Hervé Cochard, Institut National de la Recherche Agronomique - France
- Anna De Juan, University of Barcelona - Spain
- Björn Sundberg, Swedish University of Agricultural Sciences - Sweden
- Ingo Burgert, ETH Zürich - Switzerland
Research Output
- 1398 Citations
- 61 Publications
- 3 Disseminations
- 7 Scientific Awards
- 2 Fundings
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2020
Title The vibrations of lignin - A discussion of the IR and Raman spectra of G-lignins and model compounds Type PhD Thesis Author Peter; Bock Link Publication -
2018
Title Multivariate unmixing approaches on Raman images of plant cell walls: New insights or overinterpretation of results? DOI 10.3929/ethz-b-000275755 Type Other Author Felhofer Link Publication -
2018
Title MOESM4 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742385.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM3 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742364.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM2 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742343.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM10 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742298.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM1 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742322.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM6 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742418.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM5 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742403.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM7 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742433.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM9 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742463.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2018
Title MOESM8 of Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.6084/m9.figshare.6742448.v1 Type Other Author Batirtze Prats-Mateu Link Publication -
2021
Title A Guide to Elucidate the Hidden Multicomponent Layered Structure of Plant Cuticles by Raman Imaging DOI 10.3389/fpls.2021.793330 Type Journal Article Author Bock P Journal Frontiers in Plant Science Pages 793330 Link Publication -
2021
Title REPRISAL: mapping lignification dynamics using chemistry, data segmentation, and ratiometric analysis DOI 10.1093/plphys/kiab490 Type Journal Article Author Morel O Journal Plant Physiology Pages 816-830 Link Publication -
2021
Title Cell wall characteristics during sexual reproduction of Mougeotia sp. (Zygnematophyceae) revealed by electron microscopy, glycan microarrays and RAMAN spectroscopy DOI 10.1007/s00709-021-01659-5 Type Journal Article Author Permann C Journal Protoplasma Pages 1261-1275 Link Publication -
2021
Title Physiological and anatomical responses to drought stress differ between two larch species and their hybrid DOI 10.1007/s00468-021-02129-4 Type Journal Article Author Sasani N Journal Trees Pages 1467-1484 Link Publication -
2016
Title Tip in–light on: Advantages, challenges, and applications of combining AFM and Raman microscopy on biological samples DOI 10.1002/jemt.22744 Type Journal Article Author Prats-Mateu B Journal Microscopy Research and Technique Pages 30-40 Link Publication -
2021
Title Raman imaging reveals in-situ microchemistry of cuticle and epidermis of spruce needles DOI 10.1186/s13007-021-00717-6 Type Journal Article Author Sasani N Journal Plant Methods Pages 17 Link Publication -
2021
Title Oak wood drying: precipitation of crystalline ellagic acid leads to discoloration DOI 10.1515/hf-2020-0170 Type Journal Article Author Felhofer M Journal Holzforschung Pages 712-720 Link Publication -
2021
Title Induction of Conjugation and Zygospore Cell Wall Characteristics in the Alpine Spirogyra mirabilis (Zygnematophyceae, Charophyta): Advantage under Climate Change Scenarios? DOI 10.3390/plants10081740 Type Journal Article Author Permann C Journal Plants Pages 1740 Link Publication -
2021
Title Raman imaging of Micrasterias: new insights into shape formation DOI 10.1007/s00709-021-01685-3 Type Journal Article Author Felhofer M Journal Protoplasma Pages 1323-1334 Link Publication -
2018
Title Tip in, light on: Raman and AFM studies of biological materials Type PhD Thesis Author Batirtze; Prats-Mateu Link Publication -
2018
Title Electrically Conducting Carbon Microparticles by Direct Carbonization of Spent Wood Pulping Liquor DOI 10.1021/acssuschemeng.7b03582 Type Journal Article Author Ko¨Hnke J Journal ACS Sustainable Chemistry & Engineering Pages 3385-3391 -
2018
Title Raman Imaging of Plant Cell Walls DOI 10.1007/978-3-319-75380-5_19 Type Book Chapter Author Gierlinger N Publisher Springer Nature Pages 471-482 -
2017
Title Climate-Dependent Heat-Triggered Opening Mechanism of Banksia Seed Pods DOI 10.1002/advs.201700572 Type Journal Article Author Huss J Journal Advanced Science Pages 1700572 Link Publication -
2017
Title The effect of altered lignin composition on mechanical properties of CINNAMYL ALCOHOL DEHYDROGENASE (CAD) deficient poplars DOI 10.1007/s00425-017-2828-z Type Journal Article Author Özparpucu M Journal Planta Pages 887-897 -
2017
Title Vessel-Specific Reintroduction of CINNAMOYL-COA REDUCTASE1 (CCR1) in Dwarfed ccr1 Mutants Restores Vessel and Xylary Fiber Integrity and Increases Biomass DOI 10.1104/pp.17.01462 Type Journal Article Author De Meester B Journal Plant Physiology Pages 611-633 Link Publication -
2017
Title New Insights into Plant Cell Walls by Vibrational Microspectroscopy Type Postdoctoral Thesis Author Notburga, Gierlinger -
2017
Title Unravelling the impact of lignin on cell wall mechanics: a comprehensive study on young poplar trees downregulated for CINNAMYL ALCOHOL DEHYDROGENASE (CAD) DOI 10.1111/tpj.13584 Type Journal Article Author Özparpucu M Journal The Plant Journal Pages 480-490 Link Publication -
2017
Title Complex bud architecture and cell-specific chemical patterns enable supercooling of Picea abies bud primordia DOI 10.1111/pce.13078 Type Journal Article Author Kuprian E Journal Plant, Cell & Environment Pages 3101-3112 Link Publication -
2017
Title New insights into plant cell walls by vibrational microspectroscopy DOI 10.1080/05704928.2017.1363052 Type Journal Article Author Gierlinger N Journal Applied Spectroscopy Reviews Pages 517-551 Link Publication -
2016
Title Waterproofing in Arabidopsis: Following Phenolics and Lipids In situ by Confocal Raman Microscopy DOI 10.3389/tchem.2016.00010 Type Journal Article Author Hauser Marie Theres Journal FRONTIERS IN CHEMISTRY -
2016
Title Waterproofing in Arabidopsis: Following Phenolics and Lipids In situ by Confocal Raman Microscopy DOI 10.3389/fchem.2016.00010 Type Journal Article Author Mateu B Journal Frontiers in Chemistry Pages 10 Link Publication -
2018
Title Temperature-induced self-sealing capability of Banksia follicles DOI 10.1098/rsif.2018.0190 Type Journal Article Author Huss J Journal Journal of The Royal Society Interface Pages 20180190 Link Publication -
2018
Title Antifungal stilbene impregnation: transport and distribution on the micron-level DOI 10.1093/treephys/tpy073 Type Journal Article Author Felhofer M Journal Tree Physiology Pages 1526-1537 Link Publication -
2018
Title Electrically-Conductive Sub-Micron Carbon Particles from Lignin: Elucidation of Nanostructure and Use as Filler in Cellulose Nanopapers DOI 10.3390/nano8121055 Type Journal Article Author Köhnke J Journal Nanomaterials Pages 1055 Link Publication -
2018
Title Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? DOI 10.1186/s13007-018-0320-9 Type Journal Article Author Prats-Mateu B Journal Plant Methods Pages 52 Link Publication -
2018
Title Biomineralization of strontium and barium contributes to detoxification in the freshwater alga Micrasterias DOI 10.1016/j.jplph.2018.08.008 Type Journal Article Author Niedermeier M Journal Journal of Plant Physiology Pages 80-91 Link Publication -
2018
Title Following laser induced changes of plant phenylpropanoids by Raman microscopy DOI 10.1038/s41598-018-30096-3 Type Journal Article Author Prats-Mateu B Journal Scientific Reports Pages 11804 Link Publication -
2018
Title Lignification and Advances in Lignin Imaging in Plant Cell Walls DOI 10.1002/9781119312994.apr0656 Type Book Chapter Author Simon C Publisher Wiley Pages 909-940 -
2018
Title Hydraulic and mechanical dysfunction of Norway spruce sapwood due to extreme summer drought in Scandinavia DOI 10.1016/j.foreco.2017.11.051 Type Journal Article Author Rosner S Journal Forest Ecology and Management Pages 527-540 Link Publication -
2022
Title The walnut shell network: 3D visualisation of symplastic and apoplastic transport routes in sclerenchyma tissue DOI 10.1007/s00425-022-03960-w Type Journal Article Author Antreich S Journal Planta Pages 49 Link Publication -
2020
Title Atypical lignification in eastern leatherwood (Dirca palustris) DOI 10.1111/nph.16394 Type Journal Article Author Mottiar Y Journal New Phytologist Pages 704-713 Link Publication -
2020
Title Infrared and Raman spectra of lignin substructures: Dibenzodioxocin DOI 10.1002/jrs.5808 Type Journal Article Author Bock P Journal Journal of Raman Spectroscopy Pages 422-431 Link Publication -
2022
Title 3D (x-y-t) Raman imaging of tomato fruit cuticle: microchemistry during development DOI 10.1101/2022.06.01.494410 Type Preprint Author Moreno A Pages 2022.06.01.494410 Link Publication -
2023
Title Chemical tissue heterogeneity of young Arabidopsis stems revealed by Raman imaging combined with multivariate data analysis DOI 10.1016/j.microc.2023.108900 Type Journal Article Author Morel O Journal Microchemical Journal Pages 108900 Link Publication -
2020
Title Raman Imaging of Plant Cell Walls DOI 10.1007/978-1-0716-0621-6_15 Type Book Chapter Author Mateu B Publisher Springer Nature Pages 251-295 -
2020
Title Wood Deformation Leads to Rearrangement of Molecules at the Nanoscale DOI 10.1021/acs.nanolett.0c00205 Type Journal Article Author Felhofer M Journal Nano Letters Pages 2647-2653 Link Publication -
2020
Title From the Soft to the Hard: Changes in Microchemistry During Cell Wall Maturation of Walnut Shells DOI 10.3389/fpls.2020.00466 Type Journal Article Author Xiao N Journal Frontiers in Plant Science Pages 466 Link Publication -
2020
Title A millennium-long Blue Ring chronology from the Spanish Pyrenees reveals severe ephemeral summer cooling after volcanic eruptions DOI 10.1088/1748-9326/abc120 Type Journal Article Author Piermattei A Journal Environmental Research Letters Pages 124016 Link Publication -
2019
Title Lignin-based multiwall carbon nanotubes DOI 10.1016/j.compositesa.2019.03.026 Type Journal Article Author Gindl-Altmutter W Journal Composites Part A: Applied Science and Manufacturing Pages 175-179 -
2019
Title Significant influence of lignin on axial elastic modulus of poplar wood at low microfibril angles under wet conditions DOI 10.1093/jxb/erz180 Type Journal Article Author Özparpucu M Journal Journal of Experimental Botany Pages 4039-4047 Link Publication -
2019
Title Infrared and Raman spectra of lignin substructures: Coniferyl alcohol, abietin, and coniferyl aldehyde DOI 10.1002/jrs.5588 Type Journal Article Author Bock P Journal Journal of Raman Spectroscopy Pages 778-792 Link Publication -
2019
Title The Puzzle of the Walnut Shell: A Novel Cell Type with Interlocked Packing DOI 10.1002/advs.201900644 Type Journal Article Author Antreich S Journal Advanced Science Pages 1900644 Link Publication -
2022
Title 3D (x-y-t) Raman imaging of tomato fruit cuticle: Microchemistry during development DOI 10.1093/plphys/kiac369 Type Journal Article Author Moreno A Journal Plant Physiology Pages 219-232 Link Publication -
2022
Title Tracing biotic and abiotic stress reactions on the micro-level in softwood tracheids and cuticles Type PhD Thesis Author Nadia; Sasani Link Publication -
2014
Title Revealing changes in molecular composition of plant cell walls on the micron-level by Raman mapping and vertex component analysis (VCA) DOI 10.3389/fpls.2014.00306 Type Journal Article Author Gierlinger N Journal Frontiers in Plant Science Pages 306 Link Publication -
2014
Title Elucidating structural and compositional changes in plant tissues and single cells by Raman spectroscopic imaging Type Journal Article Author Mateu B.P. Journal Spectroscopy Europe Pages 11-14 Link Publication -
2016
Title Label-free live cell imaging by Confocal Raman Microscopy identifies CHO host and producer cell lines DOI 10.1002/biot.201600037 Type Journal Article Author Mateu B Journal Biotechnology Journal Pages 1600037 Link Publication -
2020
Title A synoptic view on intra-annual density fluctuations in Abies alba DOI 10.1016/j.dendro.2020.125781 Type Journal Article Author Mayer K Journal Dendrochronologia Pages 125781 Link Publication -
2020
Title Winter Nights during Summer Time: Stress Physiological Response to Ice and the Facilitation of Freezing Cytorrhysis by Elastic Cell Wall Components in the Leaves of a Nival Species DOI 10.3390/ijms21197042 Type Journal Article Author Stegner M Journal International Journal of Molecular Sciences Pages 7042 Link Publication
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2015
Link
Title Kinderuni Wien Type Participation in an activity, workshop or similar Link Link -
2015
Link
Title Junior Science club Type Participation in an activity, workshop or similar Link Link -
2016
Title Raman-Mikroskopie in Wien: Wassershutz für Pflanzen Type A press release, press conference or response to a media enquiry/interview
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2021
Title BOKU Talent Award Type Research prize Level of Recognition National (any country) -
2019
Title Symposium "Moderne bildgebende Verfahren: Das unsichtbare sichtbar machen" (ÖAW, Wien) Type Personally asked as a key note speaker to a conference Level of Recognition National (any country) -
2019
Title WITec paper award gold Type Poster/abstract prize Level of Recognition Continental/International -
2018
Title Wood Nanotechnology conference, Ascona, Switzerland: Invited Speaker Type Personally asked as a key note speaker to a conference Level of Recognition Continental/International -
2017
Title Invited keynote: 253rd ACS meeting San Francisio Type Personally asked as a key note speaker to a conference Level of Recognition Continental/International -
2017
Title DOC - Stipendium (ÖAW) Type Research prize Level of Recognition National (any country) -
2017
Title Klaus Fischer - Innovationspreis für Technik und Umwelt Type Research prize Level of Recognition National (any country)
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2017
Title Shed new light on heartwood formation Type Fellowship Start of Funding 2017 -
2016
Title Scattering and tapping on soft-hard-open nuts Type Research grant (including intramural programme) Start of Funding 2016