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Integrated Digitalized Production of Protein Therapeutics

Integrated Digitalized Production of Protein Therapeutics

Christian G. Huber (ORCID: 0000-0001-8358-1880)
  • Grant DOI 10.55776/FG12
  • Funding program Research Groups
  • Status ongoing
  • Start July 15, 2022
  • End July 14, 2027
  • Funding amount € 1,516,006

Disciplines

Chemistry (20%); Industrial Biotechnology (70%); Computer Sciences (10%)

Keywords

    Biotherapeutics, Molecular Attributes, Process Modeling, Computational Modeling, Process Parameters, Bioanalytics

Abstract

Three research groups at the Paris Lodron University of Salzburg and the Technical University of Vienna are involved in elaborating a better understanding and design of bioprocesses. The major aim of the collaboration is the production of biotherapeutics of predictable quality, safety, and efficacy. Eight of the ten most important pharmaceutical products in 2016 were biopharmaceuticals - drugs obtained from biological sources, mostly by means of culture of mammalian cells. Process-parameters for a better quality The industrial production of biopharmaceuticals through cell culture involves the selection of suitable cells as well as the optimization of the conditions for cell culture. In this context, not only productivity and viability of the host cells are pivotal, but also the molecular structure and purity of the target product (produced in such cells) are critical to ensure therapeutic safety and efficacy of the drug. The basic idea The structure of the target product may be described by means of so -called quality attributes, which very strongly depend on cell culture conditions. Therefore, tight process control strategies via suitable, so-called process parameters are obligatory. Through simultaneous monitoring of quality attributes and process parameters, we plan to elaborate digital models of bioprocesses. Deploying these models, bioprocess parameters may be immediately adapted in the future in order to obtain the desired quality attributes immediately in the course of the bioprocess. Deployment of mathematical models Computer-based modeling represents the prerequisite for such immediate bioprocess control. For the first time, the research team attempts to connect and predict bioprocess parameters and quality attributes systematically via digital, mathematical models. This will be facilitated by the unique acquisition and combination of process data, data about the producing cells, and quality attributes of the target product. Apart from predictable quality, safety, and efficacy of the product, this will also result in more labor- and cost-effective production of biotherapeutics.

Consortium
  • Christian G. Huber, Universität Salzburg
    coordinator (15.07.2022 -)
  • Nicole Borth, Universität für Bodenkultur Wien
    consortium member (15.07.2022 -)
  • Nikolaus Fortelny, Universität Salzburg
    consortium member (15.07.2023 -)
  • Ruth Birner-Grünberger, Technische Universität Wien
    consortium member (15.07.2022 -)
Research institution(s)
  • Universität Salzburg
Project participants
  • Silke Ruzek, Novartis Pharma GmbH , national collaboration partner
  • Urs Lohrig, Novartis Pharma GmbH , national collaboration partner
  • Mario Schubert, Universität Salzburg , national collaboration partner
International project participants
  • Koen Sandra, Research Institute of Chromatography - Belgium
  • Sarah Cianferani, Université de Strasbourg - France
  • Markus Ralser, Charité - Universitätsmedizin Berlin - Germany
  • Oliver Kohlbacher, Eberhard Karls Universität Tübingen - Germany
  • Ralf Pörtner, Technische Universität Hamburg-Harburg - Germany
  • Ralf Takors, Universität Stuttgart - Germany
  • Massimiliano Barolo, Università degli studi di Padova - Italy
  • Manfred Wuhrer, Leiden University Medical Centre (LUMC) - Netherlands
  • Matej Horvat, Novartis - Slovenia
  • Nilay Shah, Imperial College London

Research Output

  • 17 Citations
  • 22 Publications
Publications
  • 2024
    Title Characterization of critical quality attributes of therapeutic monoclonal antibodies from different CHO cell line subclones - a case study
    Type Other
    Author Thomas Berger
    Conference 34th MassSpec-Forum Vienna 2024
  • 2024
    Title Selectivity and Resolving Power of Hydrophobic Interaction Chromatography Targeting the Separation of Monoclonal Antibody Variants
    DOI 10.1021/acs.analchem.3c04011
    Type Journal Article
    Author Ewonde R
    Journal Analytical Chemistry
    Pages 1121-1128
    Link Publication
  • 2023
    Title Loss of lysosomal acid lipase results in mitochondrial dysfunction and fiber switch in skeletal muscles of mice
    DOI 10.1016/j.molmet.2023.101869
    Type Journal Article
    Author Akhmetshina A
    Journal Molecular Metabolism
    Pages 101869
    Link Publication
  • 2025
    Title Increased antioxidative defense and reduced advanced glycation end-product formation by metabolic adaptation in non-small-cell-lung-cancer patients
    DOI 10.1038/s41467-025-60326-y
    Type Journal Article
    Author Tomin T
    Journal Nature Communications
    Pages 5157
    Link Publication
  • 2025
    Title Quality attributes of therapeutic proteins depend on process parameteres employed in the bioprocessing: why are both critical?
    Type Other
    Author Thomas Berger
    Conference 35. Doktorandenseminar des AK Separation Science 12.-14.01.25 in Hohenroda, GER
  • 2025
    Title Temporal Profiling of the Cellular Response to Nutrient Influx in the NISTCHO Bioprocess by Mass Spectrometry-Based Multi-Omics
    Type Other
    Author Hofer L
    Conference EuPA 2025 - Saint-Malo
  • 2025
    Title Temporal Profiling of the Cellular Response to Feeding in the NISTCHO Bioprocess by Mass Spectrometry-Based Multi-Omics
    Type Other
    Author Hofer L
    Conference 35th MassSpec Forum Vienna
    Link Publication
  • 2025
    Title Quality Attributes of Therapeutic Proteins Depend on Process Parameters Employed in the Bioprocessing: Why Are Both Critical?
    Type Other
    Author Thomas Berger
    Conference HPLC 2025 15. - 19.06.25 in Bruges, BEL
  • 2025
    Title Temporal Dynamics of Cellular and Metabolic Behaviour in CHO-Based mAb Production: A Multi-Omics Bioprocess Characterisation
    Type Other
    Author Dominik Hofreither
    Conference 5th ESACT Frontiers Retreat
  • 2025
    Title Multi-Level Characterization of NISTCHO: Temperature Shift Affects Phenotype and Critical Quality Attributes
    Type Other
    Author Larissa Hofer
    Conference Cell Culture Engineering XIX
  • 2025
    Title Characterization of Antibody N-glycosylation from a Publicly Available Producer CHO Cell Line NISTCHO
    Type Other
    Author Thomas Berger
    Conference BioProcess International Europe 2025 13.-15.05.25 in Hamburg, GER
  • 2025
    Title Cell membrane cholesterol affects serotonin transporter efflux due to altered transporter oligomerization
    DOI 10.1038/s41380-025-03201-y
    Type Journal Article
    Author Rudin D
    Journal Molecular Psychiatry
    Pages 1-13
    Link Publication
  • 2024
    Title “Small is beautiful” – Examining reliable determination of low-abundant therapeutic antibody glycovariants
    DOI 10.1016/j.jpha.2024.100982
    Type Journal Article
    Author Böttinger K
    Journal Journal of Pharmaceutical Analysis
    Pages 100982
    Link Publication
  • 2024
    Title Time-Resolved Mass Spectrometry-Based Multi-Omics Characterisation of NISTCHO Cellular Function In Response To Nutrient Influx
    Type Other
    Author Hofer L
    Conference ESACT 2024
    Link Publication
  • 2024
    Title Time-Resolved Mass Spectrometry-Based Multi-Omics Characterisation of the NISTCHO Bioprocess
    Type Other
    Author Hofer L
    Conference APMRS/CEEPC 2024
    Link Publication
  • 2024
    Title Systematic Bioprocess Characterisation of NISTCHO, a Freely Available Producer Cell Line
    Type Other
    Author Dominik Hofreither
    Conference ESACT Meeting 2024
  • 2024
    Title Comparison of critical quality attributes of therapeutic monoclonal antibodies from the NISTCHO cell line under varying critical process parameters
    Type Other
    Author Aleksandar Paunovic
    Conference 34th International Symposium on Chromatography 2024, 6/10/24- 10/10/24 Liverpool, United kingdom
  • 2024
    Title Characterization of Antibody N-glycosylation from a Publicly Available Producer CHO Cell Line: NISTCHO
    Type Other
    Author Aleksandar Paunovic
    Conference 28th ESACT Meeting 2024,22 June 2024 → 27 June 2024 Ort: Edinburgh, United Kingdom
  • 2023
    Title Characterization of critical quality attributes of therapeutic monoclonal antibodies
    Type Other
    Author Aleksandar Paunovic
    Conference Austrian Proteomics and Metabolomics Research Symposium
  • 2023
    Title Characterization of critical quality attributes of therapeutics monoclonal antibodies
    Type Other
    Author Aleksandar Paunovic
    Conference APMRS 2023 27.- 29.0923 in Innsbruck, AT
  • 2025
    Title Presenilin-1 controls glucose metabolism and identity of pancreatic beta cells
    DOI 10.1101/2025.09.05.674426
    Type Preprint
    Author Koshenov Z
    Pages 2025.09.05.674426
    Link Publication
  • 2025
    Title Heart saver: Comprehensive investigation of (redox-) proteomic and thiol metabolite changes induced by Cana-, Dapa-, Empagliflozin treatment in 2D and 3D heart cell models reveals increased mitochondrial activity and glutathione redox defense and inv
    DOI 10.1016/j.lfs.2025.123923
    Type Journal Article
    Author Hoehlschen J
    Journal Life Sciences
    Pages 123923
    Link Publication

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