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Mitochondrial Disease: Clinics, Genetics, Mechanism &Therapy (GENOMIT)

Mitochondrial Disease: Clinics, Genetics, Mechanism &Therapy (GENOMIT)

Johannes Mayr (ORCID: 0000-0001-6970-336X)
  • Grant DOI 10.55776/I2741
  • Funding program International - Multilateral Initiatives
  • Status ended
  • Start July 1, 2016
  • End March 31, 2020
  • Funding amount € 231,992
  • Project website

ERA-NET: Rare Diseases

Disciplines

Biology (40%); Clinical Medicine (25%); Medical-Theoretical Sciences, Pharmacy (25%); Medical Biotechnology (10%)

Keywords

    Mitochondrial Energy Metabolism, International Patient Database, Genome Sequencing, Pathomechanism, Protein Therapy, Disease Models

Abstract Final report

Mitochondria are the power plants of the cell. The produced energy is saved as so called ATP, which is formed via the breakdown of carbohydrates, fatty acids and proteins. In the last few years a plethora of new genetic defects was identified in patients with mitochondrial disorders (mitochondriopathy). Till now defects in about 250 genes were described. It can be assumed that one tenth of all human genes are associated with mitochondrial disorders. Every disease has a unique genetic background and in general no effective therapies are available. GENOMIT is a network of eight partners in Germany, Austria, Italy, France, and USA which act in close collaboration with the International Mitochondrial Patient (IMP, http://www.mitopatients.org/) organization to improve the diagnosis and care of mitochondrial disease patients. GENOMIT will i) create the largest mitochondrial patient database worldwide, integrating four existing national registries from Europe and USA, including more than 4500 patients, ii) boost genome-wide diagnostics and optimize interpretation of genomic data by aggregating an enormous number of datasets, iii) extend functional studies on novel genes and pathways involved in the pathophysiology of mitochondriopathies, and iv) evaluate novel therapeutic options for example the so called protein replacement therapy with particular emphasis on defects of the respiratory chain complex I, that is frequently affected. GENOMIT partners are established national hubs for the biochemical and genetic diagnosis and care of patients with mitochondriopathies. They represent the existing national patient registries and have access to the largest collection of mitochondriopathy-related genetic data in Europe. Each of them has also developed unique expertise that will be shared synergistically within the network. GENOMIT will thus create the critical mass to expand knowledge on the natural history, and the connection of genetic defects and the physiological manifestation of mitochondrial disease, and gain insight into pathophysiologic mechanisms and feasibility of novel therapeutic approaches. The main task of the Austrian subproject is the functional characterization of novel genes and signalling pathways involved in the pathology of mitochondrial diseases (point iii above). Furthermore, we participate in the other three work packages. During the previous E-rare project (I 920-B13, Mitochondriopathies Network for diagnosis and therapy [GENOMIT]) the Salzburg team was involved in the identification of four novel genetic defects. In total 19 scientific articles were published.

GENOMIT is an E-Rare funded network of eight partners in Germany, Austria, Italy, France, and USA which act in close collaboration with Mitochondrial Patient organizations to improve the diagnosis and care of mitochondrial disease patients. GENOMIT partners are established national hubs for the biochemical and genetic diagnosis and care of patients with mitochondriopathies. They represent the existing national patient registries and have access to the largest collection of mitochondriopathy-related NGS data in Europe. Each of them has also developed unique expertise that will be shared synergistically within the network. GENOMIT will thus create the critical mass to expand knowledge on the natural history, and genotype-phenotype correlation of mitochondrial disease, and gain insight into pathophysiologic mechanisms and feasibility of novel therapeutic approaches.

Research institution(s)
  • Paracelsus Med.-Priv.-Univ. Salzburg / SALK - 100%
International project participants
  • Agnes Rötig, Institut National de la Santé et de la Recherche Médicale - France
  • Pierre Rustin, Institut National de la Santé et de la Recherche Médicale - France
  • Holger Prokisch, Helmholtz Zentrum München - Germany
  • Thomas Klopstock, Ludwig-Maximilians-Universität München - Germany
  • Tina Wenz, Universität Köln - Germany
  • Constanza Lamperti, National Neurological Institute "C. Besta" - Italy
  • Marni Joy Falk, Children´s Hospital of Philadelphia - USA

Research Output

  • 1810 Citations
  • 48 Publications
  • 10 Methods & Materials
  • 3 Disseminations
  • 5 Medical Products
  • 5 Scientific Awards
  • 3 Fundings
Publications
  • 2021
    Title Mutations in HID1 Cause Syndromic Infantile Encephalopathy and Hypopituitarism
    DOI 10.22029/jlupub-9160
    Type Journal Article
    Author Achleitner M
    Link Publication
  • 2020
    Title Bi-allelic HPDL Variants Cause a Neurodegenerative Disease Ranging from Neonatal Encephalopathy to Adolescent-Onset Spastic Paraplegia.
    DOI 10.1016/j.ajhg.2020.06.015
    Type Journal Article
    Author Grimmel M
    Journal American journal of human genetics
    Pages 364-373
    Link Publication
  • 2022
    Title Mutations in HID1 Cause Syndromic Infantile Encephalopathy and Hypopituitarism
    DOI 10.1530/ey.19.1.5
    Type Journal Article
    Author A S
    Journal Yearbook of Paediatric Endocrinology
    Link Publication
  • 2021
    Title Mutations in HID1 Cause Syndromic Infantile Encephalopathy and Hypopituitarism
    DOI 10.1002/ana.26127
    Type Journal Article
    Author Schänzer A
    Journal Annals of Neurology
    Pages 143-158
    Link Publication
  • 2020
    Title Severe syndromic ID and skewed X-inactivation in a girl with NAA10 dysfunction and a novel heterozygous de novo NAA10 p.(His16Pro) variant - a case report
    DOI 10.1186/s12881-020-01091-1
    Type Journal Article
    Author Bader I
    Journal BMC Medical Genetics
    Pages 153
    Link Publication
  • 2019
    Title Mitochondrial complex deficiency by novel compound heterozygous TMEM70 variants and correlation with developmental delay, undescended testicle, and left ventricular noncompaction in a Japanese patient: A case report
    DOI 10.1002/ccr3.2050
    Type Journal Article
    Author Hirono K
    Journal Clinical Case Reports
    Pages 553-557
    Link Publication
  • 2019
    Title SSBP1 mutations cause mtDNA depletion underlying a complex optic atrophy disorder
    DOI 10.1172/jci128514
    Type Journal Article
    Author Del Dotto V
    Journal Journal of Clinical Investigation
    Pages 108-125
    Link Publication
  • 2019
    Title Dominant mutations in mtDNA maintenance gene SSBP1 cause optic atrophy and foveopathy
    DOI 10.1172/jci128513
    Type Journal Article
    Author Piro-Mégy C
    Journal Journal of Clinical Investigation
    Pages 143-156
    Link Publication
  • 2019
    Title Severe Deoxyguanosine Kinase Deficiency in Austria
    DOI 10.1097/mpg.0000000000002149
    Type Journal Article
    Author Waich S
    Journal Journal of Pediatric Gastroenterology and Nutrition
    Link Publication
  • 2019
    Title Choline-related-inherited metabolic diseases—A mini review
    DOI 10.1002/jimd.12011
    Type Journal Article
    Author Wortmann S
    Journal Journal of Inherited Metabolic Disease
    Pages 237-242
    Link Publication
  • 2019
    Title Bi-Allelic UQCRFS1 Variants Are Associated with Mitochondrial Complex III Deficiency, Cardiomyopathy, and Alopecia Totalis
    DOI 10.1016/j.ajhg.2019.12.005
    Type Journal Article
    Author Gusic M
    Journal The American Journal of Human Genetics
    Pages 102-111
    Link Publication
  • 2019
    Title SSBP1 faux pas in mitonuclear tango causes optic neuropathy
    DOI 10.1172/jci132532
    Type Journal Article
    Author Zelinger L
    Journal Journal of Clinical Investigation
    Pages 62-64
    Link Publication
  • 2019
    Title Biallelic variants in the transcription factor PAX7 are a new genetic cause of myopathy
    DOI 10.1038/s41436-019-0532-z
    Type Journal Article
    Author Feichtinger R
    Journal Genetics in Medicine
    Pages 2521-2531
    Link Publication
  • 2019
    Title Utility of Whole Blood Thiamine Pyrophosphate Evaluation in TPK1-Related Diseases
    DOI 10.3390/jcm8070991
    Type Journal Article
    Author Bugiardini E
    Journal Journal of Clinical Medicine
    Pages 991
    Link Publication
  • 2018
    Title Additional file 1: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844190
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 1: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844190.v1
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 2: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844196
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 3: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844202
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 3: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844202.v1
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 4: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844205
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 4: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844205.v1
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 5: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844208
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 5: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844208.v1
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Additional file 2: of Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.6084/m9.figshare.6844196.v1
    Type Other
    Author Mastantuono E
    Link Publication
  • 2018
    Title Biallelic Mutations in ATP5F1D, which Encodes a Subunit of ATP Synthase, Cause a Metabolic Disorder.
    DOI 10.1016/j.ajhg.2018.01.020
    Type Journal Article
    Author Oláhová M
    Journal American journal of human genetics
    Pages 494-504
  • 2018
    Title Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.5167/uzh-160708
    Type Other
    Author Mastantuono
    Link Publication
  • 2016
    Title CAD mutations and uridine-responsive epileptic encephalopathy
    DOI 10.1093/brain/aww300
    Type Journal Article
    Author Koch J
    Journal Brain
    Pages 279-286
    Link Publication
  • 2017
    Title Progressive deafness-dystonia due to SERAC1 mutations: A study of 67 cases
    DOI 10.60692/ff7e0-b0608
    Type Other
    Author Katarzyna Iwanicka-Pronicka
    Link Publication
  • 2017
    Title Progressive deafness-dystonia due to SERAC1 mutations: A study of 67 cases
    DOI 10.60692/fxh1j-wpv03
    Type Other
    Author Katarzyna Iwanicka-Pronicka
    Link Publication
  • 2017
    Title Biallelic C1QBP Mutations Cause Severe Neonatal-, Childhood-, or Later-Onset Cardiomyopathy Associated with Combined Respiratory-Chain Deficiencies
    DOI 10.17863/cam.13698
    Type Journal Article
    Author Feichtinger R
    Link Publication
  • 2018
    Title Bi-allelic Mutations in NDUFA6 Establish Its Role in Early-Onset Isolated Mitochondrial Complex I Deficiency
    DOI 10.1016/j.ajhg.2018.08.013
    Type Journal Article
    Author Alston C
    Journal The American Journal of Human Genetics
    Pages 592-601
    Link Publication
  • 2018
    Title Bi-allelic mutations in TRAPPC2L result in a neurodevelopmental disorder and have an impact on RAB11 in fibroblasts
    DOI 10.1136/jmedgenet-2018-105441
    Type Journal Article
    Author Milev M
    Journal Journal of Medical Genetics
    Pages 753
  • 2018
    Title Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?
    DOI 10.1186/s13023-018-0784-8
    Type Journal Article
    Author Repp B
    Journal Orphanet Journal of Rare Diseases
    Pages 120
    Link Publication
  • 2018
    Title HTRA2 Defect: A Recognizable Inborn Error of Metabolism with 3-Methylglutaconic Aciduria as Discriminating Feature Characterized by Neonatal Movement Disorder and Epilepsy—Report of 11 Patients
    DOI 10.1055/s-0038-1667345
    Type Journal Article
    Author Kovacs-Nagy R
    Journal Neuropediatrics
    Pages 373-378
  • 2018
    Title NDUFB8 Mutations Cause Mitochondrial Complex I Deficiency in Individuals with Leigh-like Encephalomyopathy
    DOI 10.1016/j.ajhg.2018.01.008
    Type Journal Article
    Author Piekutowska-Abramczuk D
    Journal The American Journal of Human Genetics
    Pages 460-467
    Link Publication
  • 2020
    Title Bi-allelic Variants in TKFC Encoding Triokinase/FMN Cyclase Are Associated with Cataracts and Multisystem Disease
    DOI 10.1016/j.ajhg.2020.01.005
    Type Journal Article
    Author Wortmann S
    Journal The American Journal of Human Genetics
    Pages 256-263
    Link Publication
  • 2020
    Title Splitting vs lumping: Does the phenotype matter anymore?
    DOI 10.1212/nxg.0000000000000395
    Type Journal Article
    Author Pavlakis S
    Journal Neurology Genetics
    Link Publication
  • 2020
    Title Delineating MT-ATP6-associated disease: From isolated neuropathy to early onset neurodegeneration
    DOI 10.1212/nxg.0000000000000393
    Type Journal Article
    Author Stendel C
    Journal Neurology Genetics
    Link Publication
  • 2020
    Title Treating neutropenia and neutrophil dysfunction in glycogen storage disease type Ib with an SGLT2 inhibitor
    DOI 10.1182/blood.2019004465
    Type Journal Article
    Author Wortmann S
    Journal Blood
    Pages 1033-1043
    Link Publication
  • 2018
    Title PRUNE1 Deficiency: Expanding the Clinical and Genetic Spectrum
    DOI 10.1055/s-0038-1661396
    Type Journal Article
    Author Alhaddad B
    Journal Neuropediatrics
    Pages 330-338
  • 2017
    Title Progressive deafness–dystonia due to SERAC1 mutations: A study of 67 cases
    DOI 10.1002/ana.25110
    Type Journal Article
    Author Maas R
    Journal Annals of Neurology
    Pages 1004-1015
    Link Publication
  • 2017
    Title LYRM7 - associated complex III deficiency: A clinical, molecular genetic, MR tomographic, and biochemical study
    DOI 10.1016/j.mito.2017.07.001
    Type Journal Article
    Author Hempel M
    Journal Mitochondrion
    Pages 55-61
  • 2017
    Title A Guideline for the Diagnosis of Pediatric Mitochondrial Disease: The Value of Muscle and Skin Biopsies in the Genetics Era
    DOI 10.1055/s-0037-1603776
    Type Journal Article
    Author Wortmann S
    Journal Neuropediatrics
    Pages 309-314
  • 2017
    Title Genetic diagnosis of Mendelian disorders via RNA sequencing
    DOI 10.1038/ncomms15824
    Type Journal Article
    Author Kremer L
    Journal Nature Communications
    Pages 15824
    Link Publication
  • 2017
    Title Biallelic variants in WARS2 encoding mitochondrial tryptophanyl-tRNA synthase in six individuals with mitochondrial encephalopathy
    DOI 10.1002/humu.23340
    Type Journal Article
    Author Wortmann S
    Journal Human Mutation
    Pages 1786-1795
    Link Publication
  • 2017
    Title Biallelic C1QBP Mutations Cause Severe Neonatal-, Childhood-, or Later-Onset Cardiomyopathy Associated with Combined Respiratory-Chain Deficiencies
    DOI 10.1016/j.ajhg.2017.08.015
    Type Journal Article
    Author Feichtinger R
    Journal The American Journal of Human Genetics
    Pages 525-538
    Link Publication
  • 2017
    Title Biallelic Mutations in LIPT2 Cause a Mitochondrial Lipoylation Defect Associated with Severe Neonatal Encephalopathy
    DOI 10.1016/j.ajhg.2017.07.001
    Type Journal Article
    Author Habarou F
    Journal The American Journal of Human Genetics
    Pages 283-290
    Link Publication
  • 2017
    Title Combined Respiratory Chain Deficiency and UQCC2 Mutations in Neonatal Encephalomyopathy: Defective Supercomplex Assembly in Complex III Deficiencies
    DOI 10.1155/2017/7202589
    Type Journal Article
    Author Feichtinger R
    Journal Oxidative Medicine and Cellular Longevity
    Pages 7202589
    Link Publication
Methods & Materials
  • 2015
    Title Cloning-Yeast
    Type Model of mechanisms or symptoms - in vitro
    Public Access
  • 2013
    Title FACS
    Type Biological samples
    Public Access
  • 2010
    Title Convocal Laser Microscope
    Type Cell line
    Public Access
  • 2009
    Title Immunohistochemical staining
    Type Biological samples
    Public Access
  • 2006
    Title qRT-PCR
    Type Biological samples
    Public Access
  • 2006
    Title Spectrophotometric measurement of the OXPHOS enzyme activity
    Type Biological samples
    Public Access
  • 2006
    Title Sanger sequencing
    Type Biological samples
    Public Access
  • 2006
    Title Western Blot
    Type Biological samples
    Public Access
  • 2006
    Title Substrate oxidation
    Type Biological samples
    Public Access
  • 2019
    Title Seahorse measurements
    Type Biological samples
    Public Access
Disseminations
  • 2020 Link
    Title Empagliflozin-treatment for SLC37A4 deficiency
    Type A magazine, newsletter or online publication
    Link Link
  • 2016 Link
    Title Interview with Kerry Grens from The Scientist
    Type A press release, press conference or response to a media enquiry/interview
    Link Link
  • 2019 Link
    Title Paracelus Medical University Salzburg, researchers of the year 2018
    Type A broadcast e.g. TV/radio/film/podcast (other than news/press)
    Link Link
Medical Products
  • 2020 Link
    Title Empagliflozin-treatment of glycogen storage disease type Ib
    Type Therapeutic Intervention - Drug
    Link Link
  • 2019 Link
    Title Utility of whole blood thiamine pyrophosphate evaluation in TPK1-related diseases.
    Type Diagnostic Tool - Non-Imaging
    Link Link
  • 2018 Link
    Title Riboflavin for ACAD9 treatment
    Type Therapeutic Intervention - Drug
    Link Link
  • 2016 Link
    Title Riboflavin for the treatment of FLAD1 deficiency
    Type Therapeutic Intervention - Drug
    Link Link
  • 2016 Link
    Title CAD mutations and uridine-responsive epileptic encephalopathy.
    Type Therapeutic Intervention - Complementary
    Link Link
Scientific Awards
  • 2019
    Title Golden scientific award of the Paracelsus Medical University 2019
    Type Research prize
    Level of Recognition Regional (any country)
  • 2018
    Title Platin scientific award of the Paracelsus Medical University 2018
    Type Research prize
    Level of Recognition Regional (any country)
  • 2018
    Title Researcher of the Year 2018
    Type Research prize
    Level of Recognition Regional (any country)
  • 2017
    Title Platin scientific award of the Paracelsus Medical University 2017
    Type Research prize
    Level of Recognition Regional (any country)
  • 2016
    Title Platin scientific award of the Paracelsus Medical University 2016
    Type Research prize
    Level of Recognition Regional (any country)
Fundings
  • 2019
    Title Investigation of disorders in the pathway of ADP ribosylation in pediatric patients
    Type Research grant (including intramural programme)
    Start of Funding 2019
  • 2017
    Title Feasibility of flow cytometri analysis of the mtochondrial energy metabolism in fibroblasts and peripheral blood
    Type Research grant (including intramural programme)
    Start of Funding 2017
  • 2019
    Title BAIAP2 mutations - a novel genetic cause of epileptic encephalopathy
    Type Research grant (including intramural programme)
    Start of Funding 2019

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