• Skip to content (access key 1)
  • Skip to search (access key 7)
FWF — Austrian Science Fund
  • Go to overview page Discover

    • Research Radar
      • Research Radar Archives 1974–1994
    • Discoveries
      • Emmanuelle Charpentier
      • Adrian Constantin
      • Monika Henzinger
      • Ferenc Krausz
      • Wolfgang Lutz
      • Walter Pohl
      • Christa Schleper
      • Elly Tanaka
      • Anton Zeilinger
    • Impact Stories
      • Verena Gassner
      • Wolfgang Lechner
      • Birgit Mitter
      • Oliver Spadiut
      • Georg Winter
    • scilog Magazine
    • Austrian Science Awards
      • FWF Wittgenstein Awards
      • FWF ASTRA Awards
      • FWF START Awards
      • Award Ceremony
    • excellent=austria
      • Clusters of Excellence
      • Emerging Fields
    • In the Spotlight
      • 40 Years of Erwin Schrödinger Fellowships
      • Quantum Austria
    • Dialogs and Talks
      • think.beyond Summit
    • Knowledge Transfer Events
    • E-Book Library
  • Go to overview page Funding

    • Portfolio
      • excellent=austria
        • Clusters of Excellence
        • Emerging Fields
      • Projects
        • Principal Investigator Projects
        • Principal Investigator Projects International
        • Clinical Research
        • 1000 Ideas
        • Arts-Based Research
        • FWF Wittgenstein Award
      • Careers
        • ESPRIT
        • FWF ASTRA Awards
        • Erwin Schrödinger
        • doc.funds
        • doc.funds.connect
      • Collaborations
        • Specialized Research Groups
        • Special Research Areas
        • Research Groups
        • International – Multilateral Initiatives
        • #ConnectingMinds
      • Communication
        • Top Citizen Science
        • Science Communication
        • Book Publications
        • Digital Publications
        • Open-Access Block Grant
      • Subject-Specific Funding
        • AI Mission Austria
        • Belmont Forum
        • ERA-NET HERA
        • ERA-NET NORFACE
        • ERA-NET QuantERA
        • Alternative Methods to Animal Testing
        • European Partnership BE READY
        • European Partnership Biodiversa+
        • European Partnership BrainHealth
        • European Partnership ERA4Health
        • European Partnership ERDERA
        • European Partnership EUPAHW
        • European Partnership FutureFoodS
        • European Partnership OHAMR
        • European Partnership PerMed
        • European Partnership Water4All
        • Gottfried and Vera Weiss Award
        • LUKE – Ukraine
        • netidee SCIENCE
        • Herzfelder Foundation Projects
        • Quantum Austria
        • Rückenwind Funding Bonus
        • WE&ME Award
        • Zero Emissions Award
      • International Collaborations
        • Belgium/Flanders
        • Germany
        • France
        • Italy/South Tyrol
        • Japan
        • Korea
        • Luxembourg
        • Poland
        • Switzerland
        • Slovenia
        • Taiwan
        • Tyrol-South Tyrol-Trentino
        • Czech Republic
        • Hungary
    • Step by Step
      • Find Funding
      • Submitting Your Application
      • International Peer Review
      • Funding Decisions
      • Carrying out Your Project
      • Closing Your Project
      • Further Information
        • Integrity and Ethics
        • Inclusion
        • Applying from Abroad
        • Personnel Costs
        • PROFI
        • Final Project Reports
        • Final Project Report Survey
    • FAQ
      • Project Phase PROFI
      • Project Phase Ad Personam
      • Expiring Programs
        • Elise Richter and Elise Richter PEEK
        • FWF START Awards
  • Go to overview page About Us

    • Mission Statement
    • FWF Video
    • Values
    • Facts and Figures
    • Annual Report
    • What We Do
      • Research Funding
        • Matching Funds Initiative
      • International Collaborations
      • Studies and Publications
      • Equal Opportunities and Diversity
        • Objectives and Principles
        • Measures
        • Creating Awareness of Bias in the Review Process
        • Terms and Definitions
        • Your Career in Cutting-Edge Research
      • Open Science
        • Open-Access Policy
          • Open-Access Policy for Peer-Reviewed Publications
          • Open-Access Policy for Peer-Reviewed Book Publications
          • Open-Access Policy for Research Data
        • Research Data Management
        • Citizen Science
        • Open Science Infrastructures
        • Open Science Funding
      • Evaluations and Quality Assurance
      • Academic Integrity
      • Science Communication
      • Philanthropy
      • Sustainability
    • History
    • Legal Basis
    • Organization
      • Executive Bodies
        • Executive Board
        • Supervisory Board
        • Assembly of Delegates
        • Scientific Board
        • Juries
      • FWF Office
    • Jobs at FWF
  • Go to overview page News

    • News
    • Press
      • Logos
    • Calendar
      • Post an Event
      • FWF Informational Events
    • Job Openings
      • Enter Job Opening
    • Newsletter
  • Discovering
    what
    matters.

    FWF-Newsletter Press-Newsletter Calendar-Newsletter Job-Newsletter scilog-Newsletter

    SOCIAL MEDIA

    • LinkedIn, external URL, opens in a new window
    • , external URL, opens in a new window
    • Facebook, external URL, opens in a new window
    • Instagram, external URL, opens in a new window
    • YouTube, external URL, opens in a new window

    SCILOG

    • Scilog — The science magazine of the Austrian Science Fund (FWF)
  • elane login, external URL, opens in a new window
  • Scilog external URL, opens in a new window
  • de Wechsle zu Deutsch

  

Next Generation Chemical Exchange saturation transfer MRI

Next Generation Chemical Exchange saturation transfer MRI

Rudolf Stollberger (ORCID: 0000-0002-4969-3878)
  • Grant DOI 10.55776/I4870
  • Funding program Principal Investigator Projects International
  • Status ended
  • Start December 1, 2020
  • End May 31, 2025
  • Funding amount € 385,340
  • Project website

DACH: Österreich - Deutschland - Schweiz

Disciplines

Clinical Medicine (35%); Mathematics (25%); Medical Engineering (40%)

Keywords

    CEST MRI, RF pulse optimization, Compressed Sensing, Model based Reconstruction, Ultra-High Magnetic Fields

Abstract Final report

Magnetic resonance imaging (MRI) is an important medical imaging technique that combines excellent soft tissue contrast with high spatial resolution and can also provide functional information. However, pathological processes are often characterized by molecular or metabolic changes that can be observed before morphological effects. Some metabolites can be detected with the related method of MR spectroscopy, but the sensitivity of this method is relatively low and it is usually only used locally for a certain volumes. CEST MRI is a method that can produce images of the distribution of certain metabolites in tissue and therefore decisively broadens the application possibilities of MRI for precision medicine. The so- called "Chemical Exchange Saturation Transfer" of hydrogen nuclei is used for this purpose. With this effect, the high water content in tissue can increase the sensitivity for specific molecule groups up to a thousand times or even more. However, this promising technique still requires essential methodological developments for diagnostic applications in the clinic. Accordingly, this project aims to significantly advance CEST-MRI by combining new methods in image and contrast coding with current mathematical approaches for image reconstruction and data analysis. This should lead to fast and quantitative metabolic imaging on clinically usable MR systems. Established limits, such as those set by the Nyquist-Shannon sampling theorem, will be significantly exceeded. The project is divided into two overlapping work areas. On the one hand, the signal excitation for encoding metabolic information will be optimized. On the other hand, the development of new measurement and reconstruction methods will massively reduce the examination time. The newly developed methods are investigated at different magnetic field strengths, from 3T to the highest in- vivo field strengths of 9.4T. To achieve this goal, interdisciplinary international cooperation is required. The Austrian group (R. Stollberger, K. Bredies) has its strength in the development and implementation of new MRI methods based on mathematical optimization and variable image reconstruction techniques. The German group (M. Zaiss) has extensive experience in all aspects of CEST-MRI and also has access to state-of- the-art in vivo UHF systems. If the project is successfully implemented, a decisive contribution can be made to a better and more patient-friendly acquisition of metabolic information by MRI. This is an important basis for broader clinical application in biomarker imaging and precision medicine.

Pathological processes are typically characterized by molecular and metabolic changes. Therefore, the in vivo determination of these parameters is of great interest to medicine. In the field of MR tomography, the chemical exchange saturation transfer (CEST) method provides a means of determining molecular information in the form of an image. This method is still the subject of research and development. In this project, we have substantially improved essential elements of the existing challenges. We have succeeded in optimizing the pulsed encoding of CEST information so that the measured spectral information meets the theoretical requirements for quantification methods and can be obtained on standard clinical MR tomographs, while remaining robust in various applications. Another project area investigated how the dynamic equalization processes of water-bound proton magnetization and that of labile molecules can be used to integrate all necessary measurements into one procedure. Newly developed biophysical models make it possible to perform a quantitative evaluation of this data through model-based reconstruction. This approach yields the desired quantitative result in a single step. Additionally, this type of reconstruction achieves considerably better image quality with shorter measurement time. The reconstruction process uses mathematical optimization methods that are also an essential part of machine learning. As part of the international collaboration, measurements on ultra-high field systems revealed that assumptions about singular pools for specific CEST resonances were insufficient. It was found that a multipool model was necessary to optimize saturation pulses at these field strengths. As a result of this and by changing one of the boundary conditions of the optimization, pulsed saturation was able to achieve the desired performance in these cases as well. The project's international cooperation component also successfully researched strategies to ensure that the measurement sequences achieve the desired and modeled signal curves.

Research institution(s)
  • Technische Universität Graz - 67%
  • Universität Graz - 33%
Project participants
  • Kristian Bredies, Universität Graz , associated research partner
International project participants
  • Moritz Zaiss, Friedrich-Alexander-Universität Erlangen - Germany

Research Output

  • 21 Publications
  • 2 Datasets & models
  • 3 Scientific Awards
Publications
  • 2025
    Title Dynamic transitions for fast joint acquisition and reconstruction of CEST-Rex and T1
    DOI 10.48550/arxiv.2509.21184
    Type Preprint
    Author Huemer M
    Link Publication
  • 2025
    Title Radio Frequency Pulse Design for Chemical Exchange Saturation Transfer Magnetic Resonance Imaging by Optimal Control
    Type PhD Thesis
    Author Clemens Stillianu
  • 2025
    Title Generalization of Optimal Control Saturation Pulse Design for Robust and High CEST Contrast
    DOI 10.1101/2025.08.21.671490
    Type Preprint
    Author Huemer M
  • 2025
    Title Dynamic transitions for fast joint determination of CEST-Rex and T1
    Type Conference Proceeding Abstract
    Author Daniel Mackner
    Conference ISMRM & ISMRT Annual Meeting & Exhibition 2025
    Pages #1356
  • 2024
    Title MR -zero meets FLASH -controlling the transient signal decay in gradient- and RF-spoiled gradient echo sequences
    DOI 10.1002/mrm.30318
    Type Journal Article
    Author Endres J
    Journal Magnetic Resonance in Medicine
  • 2024
    Title Improved quantification in CEST-MRI by joint spatial total generalized variation
    DOI 10.1002/mrm.30129
    Type Journal Article
    Author Huemer M
    Journal Magnetic Resonance in Medicine
  • 2024
    Title Enhanced and robust contrast in CEST MRI: Saturation pulse shape design via optimal control
    DOI 10.1002/mrm.30164
    Type Journal Article
    Author Graf C
    Journal Magnetic Resonance in Medicine
  • 2024
    Title Simultaneous Measurement of CEST using Model-based Multi-Pool-Lorentzian Look-Locker Reconstruction
    Type Conference Proceeding Abstract
    Author Markus Huemer
    Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2024
    Pages #4477
  • 2024
    Title Fully Transient 3D Model Based CEST
    Type Conference Proceeding Abstract
    Author Clemens Stilianu
    Conference 10th International Workshop on Chemical Exchange Saturation Transfer: CEST 2024
    Link Publication
  • 2024
    Title Generalization of CEST Saturation Pulses designed by Optimal Control A Pulse Pair Approach
    Type Conference Proceeding Abstract
    Author Clemens Stilianu
    Link Publication
  • 2024
    Title Transient model based CEST imaging-tCEST
    Type Conference Proceeding Abstract
    Author Clemens Stilianu
    Conference Magnetic Resonance Materials in Physics, Biology and Medicine 2024
    Pages 31-33
    Link Publication
  • 2024
    Title Generalized representation of optimal control CEST saturation pulses
    Type Conference Proceeding Abstract
    Author Clemens Stilianu
    Conference Magnetic Resonance Materials in Physics, Biology and Medicine 2024
    Pages 213-215
    Link Publication
  • 2022
    Title Robust Lorentzian fitting of CEST spectra utilizingjoint spatial regularization
    Type Conference Proceeding Abstract
    Author M Fabian
    Conference ISMRM & ISMRT Annual Meeting & Exhibition 2023
    Pages #2079
  • 2022
    Title Optimization of pulsed chemical exchange saturation transfer mri by optimal control.
    Type Conference Proceeding Abstract
    Author Christina Graf
    Conference Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, 2022
    Pages #2077
  • 2023
    Title Performance of Multipool-Lorentzian fitting for CEST-MRI using joint spatial regularization
    Type Conference Proceeding Abstract
    Author Markus Huemer
    Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2023
    Pages #3434
  • 2023
    Title Lorentzian model based reconstruction for CEST-MRI
    Type Conference Proceeding Abstract
    Author Markus Huemer
    Conference Magnetic Resonance Materials in Physics, Biology and Medicine 2023
    Pages 182-183
    Link Publication
  • 2023
    Title Validate your CEST simulation!
    Type Conference Proceeding Abstract
    Author Kai Herz
    Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2023
    Pages #0907
  • 2023
    Title Improving the accuracy of Multipool-Lorentzian fitting in CEST MRI by use of a Pseudo-Voigt lineshape for direct water saturation
    Type Conference Proceeding Abstract
    Author Clemens Stilianu
    Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2023
    Pages #3116
  • 2023
    Title Creatine and phosphocreatine cest contrast of an optimal control pulse train compared to an optimized gaussian pulse train for cest imaging in calf muscle.
    Type Conference Proceeding Abstract
    Author A. Chubarov
    Conference European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), 2023
    Pages 86
    Link Publication
  • 2023
    Title B0-robustness and exchange weighting of optimal control pulses compared to state of the art pulses for cest imaging
    Type Conference Proceeding Abstract
    Author Clemens Stillianu
    Conference 2023 ISMRM & ISMRT Annual Meeting & Exhibition (ISMRM 2023), 2023
  • 2021
    Title Accuracy and performance analysis for Bloch and Bloch-McConnell simulation methods.
    DOI 10.1016/j.jmr.2021.107011
    Type Journal Article
    Author Graf C
    Journal Journal of magnetic resonance (San Diego, Calif. : 1997)
    Pages 107011
Datasets & models
  • 2025 Link
    Title fast joint acquisition and reconstruction of CEST-Rex and T1
    Type Computer model/algorithm
    Public Access
    Link Link
  • 2024 Link
    Title Optimized CEST Saturation Pulses
    Type Data analysis technique
    Public Access
    Link Link
Scientific Awards
  • 2025
    Title ISMRM Magna cum Laude Merit Award
    Type Poster/abstract prize
    Level of Recognition Continental/International
  • 2024
    Title Best paper award 2024 in biomedical engineering.
    Type Research prize
    Level of Recognition National (any country)
  • 2024
    Title 1st place award for methology: Abstract Award CEST Study group 2023 ISMRM Annual Meeting Toronto Canada
    Type Poster/abstract prize
    Level of Recognition Continental/International

Discovering
what
matters.

Newsletter

FWF-Newsletter Press-Newsletter Calendar-Newsletter Job-Newsletter scilog-Newsletter

Contact

Austrian Science Fund (FWF)
Georg-Coch-Platz 2
(Entrance Wiesingerstraße 4)
1010 Vienna

office(at)fwf.ac.at
+43 1 505 67 40

General information

  • Job Openings
  • Jobs at FWF
  • Press
  • Philanthropy
  • scilog
  • FWF Office
  • Social Media Directory
  • LinkedIn, external URL, opens in a new window
  • , external URL, opens in a new window
  • Facebook, external URL, opens in a new window
  • Instagram, external URL, opens in a new window
  • YouTube, external URL, opens in a new window
  • Cookies
  • Whistleblowing/Complaints Management
  • Accessibility Statement
  • Data Protection
  • Acknowledgements
  • IFG-Form
  • Social Media Directory
  • © Österreichischer Wissenschaftsfonds FWF
© Österreichischer Wissenschaftsfonds FWF