Next Generation Chemical Exchange saturation transfer MRI
Next Generation Chemical Exchange saturation transfer MRI
DACH: Österreich - Deutschland - Schweiz
Disciplines
Clinical Medicine (35%); Mathematics (25%); Medical Engineering (40%)
Keywords
-
CEST MRI,
RF pulse optimization,
Compressed Sensing,
Model based Reconstruction,
Ultra-High Magnetic Fields
Magnetic resonance imaging (MRI) is an important medical imaging technique that combines excellent soft tissue contrast with high spatial resolution and can also provide functional information. However, pathological processes are often characterized by molecular or metabolic changes that can be observed before morphological effects. Some metabolites can be detected with the related method of MR spectroscopy, but the sensitivity of this method is relatively low and it is usually only used locally for a certain volumes. CEST MRI is a method that can produce images of the distribution of certain metabolites in tissue and therefore decisively broadens the application possibilities of MRI for precision medicine. The so- called "Chemical Exchange Saturation Transfer" of hydrogen nuclei is used for this purpose. With this effect, the high water content in tissue can increase the sensitivity for specific molecule groups up to a thousand times or even more. However, this promising technique still requires essential methodological developments for diagnostic applications in the clinic. Accordingly, this project aims to significantly advance CEST-MRI by combining new methods in image and contrast coding with current mathematical approaches for image reconstruction and data analysis. This should lead to fast and quantitative metabolic imaging on clinically usable MR systems. Established limits, such as those set by the Nyquist-Shannon sampling theorem, will be significantly exceeded. The project is divided into two overlapping work areas. On the one hand, the signal excitation for encoding metabolic information will be optimized. On the other hand, the development of new measurement and reconstruction methods will massively reduce the examination time. The newly developed methods are investigated at different magnetic field strengths, from 3T to the highest in- vivo field strengths of 9.4T. To achieve this goal, interdisciplinary international cooperation is required. The Austrian group (R. Stollberger, K. Bredies) has its strength in the development and implementation of new MRI methods based on mathematical optimization and variable image reconstruction techniques. The German group (M. Zaiss) has extensive experience in all aspects of CEST-MRI and also has access to state-of- the-art in vivo UHF systems. If the project is successfully implemented, a decisive contribution can be made to a better and more patient-friendly acquisition of metabolic information by MRI. This is an important basis for broader clinical application in biomarker imaging and precision medicine.
Pathological processes are typically characterized by molecular and metabolic changes. Therefore, the in vivo determination of these parameters is of great interest to medicine. In the field of MR tomography, the chemical exchange saturation transfer (CEST) method provides a means of determining molecular information in the form of an image. This method is still the subject of research and development. In this project, we have substantially improved essential elements of the existing challenges. We have succeeded in optimizing the pulsed encoding of CEST information so that the measured spectral information meets the theoretical requirements for quantification methods and can be obtained on standard clinical MR tomographs, while remaining robust in various applications. Another project area investigated how the dynamic equalization processes of water-bound proton magnetization and that of labile molecules can be used to integrate all necessary measurements into one procedure. Newly developed biophysical models make it possible to perform a quantitative evaluation of this data through model-based reconstruction. This approach yields the desired quantitative result in a single step. Additionally, this type of reconstruction achieves considerably better image quality with shorter measurement time. The reconstruction process uses mathematical optimization methods that are also an essential part of machine learning. As part of the international collaboration, measurements on ultra-high field systems revealed that assumptions about singular pools for specific CEST resonances were insufficient. It was found that a multipool model was necessary to optimize saturation pulses at these field strengths. As a result of this and by changing one of the boundary conditions of the optimization, pulsed saturation was able to achieve the desired performance in these cases as well. The project's international cooperation component also successfully researched strategies to ensure that the measurement sequences achieve the desired and modeled signal curves.
- Technische Universität Graz - 67%
- Universität Graz - 33%
- Kristian Bredies, Universität Graz , associated research partner
- Moritz Zaiss, Friedrich-Alexander-Universität Erlangen - Germany
Research Output
- 21 Publications
- 2 Datasets & models
- 3 Scientific Awards
-
2025
Title Dynamic transitions for fast joint acquisition and reconstruction of CEST-Rex and T1 DOI 10.48550/arxiv.2509.21184 Type Preprint Author Huemer M Link Publication -
2025
Title Radio Frequency Pulse Design for Chemical Exchange Saturation Transfer Magnetic Resonance Imaging by Optimal Control Type PhD Thesis Author Clemens Stillianu -
2025
Title Generalization of Optimal Control Saturation Pulse Design for Robust and High CEST Contrast DOI 10.1101/2025.08.21.671490 Type Preprint Author Huemer M -
2025
Title Dynamic transitions for fast joint determination of CEST-Rex and T1 Type Conference Proceeding Abstract Author Daniel Mackner Conference ISMRM & ISMRT Annual Meeting & Exhibition 2025 Pages #1356 -
2024
Title MR -zero meets FLASH -controlling the transient signal decay in gradient- and RF-spoiled gradient echo sequences DOI 10.1002/mrm.30318 Type Journal Article Author Endres J Journal Magnetic Resonance in Medicine -
2024
Title Improved quantification in CEST-MRI by joint spatial total generalized variation DOI 10.1002/mrm.30129 Type Journal Article Author Huemer M Journal Magnetic Resonance in Medicine -
2024
Title Enhanced and robust contrast in CEST MRI: Saturation pulse shape design via optimal control DOI 10.1002/mrm.30164 Type Journal Article Author Graf C Journal Magnetic Resonance in Medicine -
2024
Title Simultaneous Measurement of CEST using Model-based Multi-Pool-Lorentzian Look-Locker Reconstruction Type Conference Proceeding Abstract Author Markus Huemer Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2024 Pages #4477 -
2024
Title Fully Transient 3D Model Based CEST Type Conference Proceeding Abstract Author Clemens Stilianu Conference 10th International Workshop on Chemical Exchange Saturation Transfer: CEST 2024 Link Publication -
2024
Title Generalization of CEST Saturation Pulses designed by Optimal Control A Pulse Pair Approach Type Conference Proceeding Abstract Author Clemens Stilianu Link Publication -
2024
Title Transient model based CEST imaging-tCEST Type Conference Proceeding Abstract Author Clemens Stilianu Conference Magnetic Resonance Materials in Physics, Biology and Medicine 2024 Pages 31-33 Link Publication -
2024
Title Generalized representation of optimal control CEST saturation pulses Type Conference Proceeding Abstract Author Clemens Stilianu Conference Magnetic Resonance Materials in Physics, Biology and Medicine 2024 Pages 213-215 Link Publication -
2022
Title Robust Lorentzian fitting of CEST spectra utilizingjoint spatial regularization Type Conference Proceeding Abstract Author M Fabian Conference ISMRM & ISMRT Annual Meeting & Exhibition 2023 Pages #2079 -
2022
Title Optimization of pulsed chemical exchange saturation transfer mri by optimal control. Type Conference Proceeding Abstract Author Christina Graf Conference Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, 2022 Pages #2077 -
2023
Title Performance of Multipool-Lorentzian fitting for CEST-MRI using joint spatial regularization Type Conference Proceeding Abstract Author Markus Huemer Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2023 Pages #3434 -
2023
Title Lorentzian model based reconstruction for CEST-MRI Type Conference Proceeding Abstract Author Markus Huemer Conference Magnetic Resonance Materials in Physics, Biology and Medicine 2023 Pages 182-183 Link Publication -
2023
Title Validate your CEST simulation! Type Conference Proceeding Abstract Author Kai Herz Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2023 Pages #0907 -
2023
Title Improving the accuracy of Multipool-Lorentzian fitting in CEST MRI by use of a Pseudo-Voigt lineshape for direct water saturation Type Conference Proceeding Abstract Author Clemens Stilianu Conference ISMRM & ISMRT Annual Meeting & Exhibition. 2023 Pages #3116 -
2023
Title Creatine and phosphocreatine cest contrast of an optimal control pulse train compared to an optimized gaussian pulse train for cest imaging in calf muscle. Type Conference Proceeding Abstract Author A. Chubarov Conference European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), 2023 Pages 86 Link Publication -
2023
Title B0-robustness and exchange weighting of optimal control pulses compared to state of the art pulses for cest imaging Type Conference Proceeding Abstract Author Clemens Stillianu Conference 2023 ISMRM & ISMRT Annual Meeting & Exhibition (ISMRM 2023), 2023 -
2021
Title Accuracy and performance analysis for Bloch and Bloch-McConnell simulation methods. DOI 10.1016/j.jmr.2021.107011 Type Journal Article Author Graf C Journal Journal of magnetic resonance (San Diego, Calif. : 1997) Pages 107011
-
2025
Title ISMRM Magna cum Laude Merit Award Type Poster/abstract prize Level of Recognition Continental/International -
2024
Title Best paper award 2024 in biomedical engineering. Type Research prize Level of Recognition National (any country) -
2024
Title 1st place award for methology: Abstract Award CEST Study group 2023 ISMRM Annual Meeting Toronto Canada Type Poster/abstract prize Level of Recognition Continental/International