Functional characterization of the S. pombe genome
Functional characterization of the S. pombe genome
Disciplines
Biology (100%)
Keywords
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Genome,
Pombe,
Knock-Out,
Chromosome Segregation,
High-Throughput,
Yeast
The fission yeast Schizosaccharomyces pombe is an important model organism for studying various aspects of biology. Sequencing of the S. pombe genome revealed almost 5.000 open reading frames including many genes with significant similarity to human disease genes. The functions of many open reading frames are unknown. A systematic whole-genome approach is required to determine their function. The KRIBB-Bioneer-CRUK consortium has almost completed the systematic gene knock-out strain collection for fission yeast and is currently analysing the phenotypes of generated mutants. However, some genes could not be deleted using a conventional knock-out technique. We have recently developed an efficient knockout strategy based on plasmids that contain large regions homologous to the target gene. In this project, we used this knockout strategy to delete genes which could not be deleted by the KRIBB-Bioneer-CRUK consortium. This allowed us to create almost complete collection of fission yeast knockout strains which will be a valuable tool for analysis of the fission yeast biology.
- Universität Wien - 100%
- Paul Nurse, Francis Crick Institute
Research Output
- 498 Citations
- 11 Publications
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2011
Title Sgo1 is required for co-segregation of sister chromatids during achiasmate meiosis I DOI 10.4161/cc.10.6.15032 Type Journal Article Author Dudas A Journal Cell Cycle Pages 951-955 Link Publication -
2010
Title S. pombe genome deletion project: An update DOI 10.4161/cc.9.12.11914 Type Journal Article Author Spirek M Journal Cell Cycle Pages 2399-2402 Link Publication -
2010
Title Laser microsurgery provides evidence for merotelic kinetochore attachments in fission yeast cells lacking Pcs1 or Clr4 DOI 10.4161/cc.9.19.13233 Type Journal Article Author Rumpf C Journal Cell Cycle Pages 3997-4004 Link Publication -
2010
Title High-throughput knockout screen in Schizosaccharomyces pombe identifies a novel gene required for efficient homolog disjunction during meiosis I DOI 10.4161/cc.9.9.11526 Type Journal Article Author Rumpf C Journal Cell Cycle Pages 1802-1808 Link Publication -
2009
Title An improved strategy for tandem affinity purification-tagging of Schizosaccharomyces pombe genes DOI 10.1002/pmic.200800948 Type Journal Article Author Cipak L Journal PROTEOMICS Pages 4825-4828 Link Publication -
2011
Title Merotelic kinetochore attachment: causes and effects DOI 10.1016/j.tcb.2011.01.003 Type Journal Article Author Gregan J Journal Trends in Cell Biology Pages 374-381 Link Publication -
2011
Title CSA and CSB proteins interact with p53 and regulate its Mdm2-dependent ubiquitination DOI 10.4161/cc.10.21.17905 Type Journal Article Author Latini P Journal Cell Cycle Pages 3719-3730 Link Publication -
2011
Title RAD21L is a novel kleisin subunit of the cohesin complex DOI 10.4161/cc.10.12.15691 Type Journal Article Author Polakova S Journal Cell Cycle Pages 1893-1893 Link Publication -
2008
Title Sister chromatids caught in the cohesin trap DOI 10.1038/nsmb0908-899 Type Journal Article Author Cipak L Journal Nature Structural & Molecular Biology Pages 899-900 Link Publication -
2010
Title Casein kinase 1 is required for efficient removal of Rec8 during meiosis I DOI 10.4161/cc.9.13.12146 Type Journal Article Author Rumpf C Journal Cell Cycle Pages 2657-2662 Link Publication -
2010
Title Chemogenomic and transcriptome analysis identifies mode of action of the chemosensitizing agent CTBT (7-chlorotetrazolo[5,1-c]benzo[1,2,4]triazine) DOI 10.1186/1471-2164-11-153 Type Journal Article Author Batova M Journal BMC Genomics Pages 153 Link Publication