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Correlated effects in animal breeding and human epidemiology

Correlated effects in animal breeding and human epidemiology

Johann Sölkner (ORCID: 0000-0002-1517-5829)
  • Grant DOI 10.55776/P20552
  • Funding program Principal Investigator Projects
  • Status ended
  • Start October 1, 2008
  • End September 30, 2011
  • Funding amount € 178,196

Disciplines

Computer Sciences (20%); Animal Breeding, Animal Production (80%)

Keywords

    Survival Analysis, Disease in Cattle, Correlated Frailty Models, Human Infant Mortality, Dairy Cattle, Software

Abstract Final report

Survival analysis is widely spread used in human epidemiology and animal breeding. The proposed project will focus on the estimation of two correlated random effects using survival techniques. In animal breeding two correlated random effects can be direct and maternal genetic effects on a certain survival measure or the genetic effect of a dairy bull on the survival of his daughters as the effect may be different during early and late stages of his daughter`s lactation or in early or late life. In epidemiology studies correlated random effects are often of interest when analysing spatial random effects. As currently is no software available to fit such models with two correlated random effects the software `Survival Kit` will be extended. Application of the new modelling capacities will make use of the new health data to examine the effect of diseases on culling and the time from a starting point to disease occurrence (e.g. the time to first mastitis occurrence after calving) in Austrian Simmental and Brown Swiss cattle. A third application will be in the field of human epidemiology where infant mortality in Austria, with emphasis on correlated spatial random effects, will be analysed.

Survival analysis is widely spread used in human epidemiology and animal breeding. The proposed project will focus on the estimation of two correlated random effects using survival techniques. In animal breeding two correlated random effects can be direct and maternal genetic effects on a certain survival measure or the genetic effect of a dairy bull on the survival of his daughters as the effect may be different during early and late stages of his daughter`s lactation or in early or late life. In epidemiology studies correlated random effects are often of interest when analysing spatial random effects. As currently is no software available to fit such models with two correlated random effects the software "Survival Kit" will be extended. Application of the new modelling capacities will make use of the new health data to examine the effect of diseases on culling and the time from a starting point to disease occurrence (e.g. the time to first mastitis occurrence after calving) in Austrian Simmental and Brown Swiss cattle. A third application will be in the field of human epidemiology where infant mortality in Austria, with emphasis on correlated spatial random effects, will be analysed.

Research institution(s)
  • Universität für Bodenkultur Wien - 100%
International project participants
  • Vincent Ducrocq, INRA - Centre de recherche de Jouy-en-Josas - France

Research Output

  • 57 Citations
  • 1 Publications
Publications
  • 2013
    Title The Survival Kit: Software to analyze survival data including possibly correlated random effects
    DOI 10.1016/j.cmpb.2013.01.010
    Type Journal Article
    Author Mészáros G
    Journal Computer Methods and Programs in Biomedicine
    Pages 503-510
    Link Publication

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