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Structure and Elasticity of Liquid Ordered / Liquid Disordered Domains

Structure and Elasticity of Liquid Ordered / Liquid Disordered Domains

Georg Pabst (ORCID: 0000-0003-1967-1536)
  • Grant DOI 10.55776/P24459
  • Funding program Principal Investigator Projects
  • Status ended
  • Start April 1, 2012
  • End August 31, 2016
  • Funding amount € 267,561
  • Project website

Disciplines

Biology (75%); Chemistry (25%)

Keywords

    Membrane Biophysics, Membrane Raft Model, Phase Coexistence, Lipid-Domains

Abstract Final report

Biological membranes regulate diverse processes on the cellular level, including material transport, signal transduction and various chemical reactions. An about 4 nm thin layer of phospholipids and proteins is the central element of these membranes and there is ample evidence that lipids and proteins mutually regulate their function. Of particular interest is the organization of lipids and proteins into functional platforms, also known as rafts, to perform specific signaling or transport tasks. Sphingomyelin and cholesterol are considered to be the major lipid components of these rafts. Clearly, basic physicochemical understanding of raft properties is of need for ground- breaking developments in human health care. Biophysical studies on complex mixtures of "raft lipids" can contribute significantly to such insights. These mixtures show phase separation into coexisting liquid ordered (L o ) and liquid disordered (L a) domains. Lo domains show several features of membrane rafts, including enrichment in cholesterol and capability of glycophosphatidylinositol (GPI)-anchored proteins to insert into these lipid environments. However, the recently discovered exclusion of raft-associating transmembrane proteins (TMP) from Lo domains questions their applicability as models for membrane rafts. The aim of the project is to derive lipid-only models for membrane rafts that recover the partitioning of raft-associating TMP, thus creating improved and experimentally stringently controlled lipid-only models of membrane rafts. The goal will be achieved by deriving those structural and elastic properties of Lo and La domains that couple to partitioning of TMP using a broad selection of biophysical techniques. In particular, we will determine lateral packing density (area per lipid), membrane thickness, spontaneous curvature, bending rigidity and Gaussian curvature modulus for several lipid mixtures, from which we will calculate the preferential insertion of protein models into a given lipid environment. This way we will understand why TMP proteins do not partition into current lipid-only raft models and how to tune Lo phase properties such that TMP partition into these environments. We will test the optimized Lo phases by measuring the partitioning of a well-established peptide model for TMP in comparison to its behavior in raft-like structures of cell-derived vesicles. Work will be performed in collaboration with several key experts in the fields of membrane biophysics and cell biology. Our results will the basis for several follow-up applications and will thus be an important contribution to close the gap between membrane biophysics and cell biology.

Cell membranes are complex composites of lipids, proteins and carbohydrates and play a pivotal role in cell physiology (e.g. compartmentalization of diverse biochemical processes, cell-cell communication, etc.). The hierarchical and dynamical structure of cell membranes is of particular importance to fulfill these functions. A current hypothesis of membrane structure claims that nanoscopically small and dynamic domains (termed membrane rafts) facilitate the assembly of certain proteins needed for e.g. signaling events or material transport through the membrane. However, direct experimental evidence for the existence of such rafts in live cells has been, due to the complexity of the system, elusive so far. Artificial membranes, in turn, composed of lipids only and in particular mixtures thereof are well known to exhibit under certain conditions domains. The aim of the project was to study physical properties of such domains in detail in order to gain insight into their role in determining preferred protein partitioning into a given lipid environment, deemed to be of high physiological importance for cellular function. To this end we developed x-ray and neutron scattering techniques, which enabled us to determine domain physical parameters under in-situ conditions, i.e. simultaneously, when they are coexisting. This way we were able to explore the nanoscopic structural properties of the domains which gave us several interesting insights. For example, we found that rigid domains lose their thickness upon heating, while coexisting soft domains become increasingly thick, up to the point where both domains mix into a homogenous bilayer. This temperature behavior can be understood in terms of a lipid exchange between the domains by diffusion. Another interesting feature of such systems is that domains align in multibilayer systems, such that like domains are located on top of each other. This is surprising, because membranes are separated by a layer of water. Our measurements showed that there is a delicate balance of repulsive and attractive interactions, which is responsible for this behavior. In particular we found fluctuation-driven repulsion to be significantly different between soft and rigid domains. Finally, the obtained physical parameters of both domains allowed us to derive the preferred partitioning of transmembrane proteins in dependence of their overall shape. Convex-shaped proteins were found to be preferentially located in soft domains, while concave proteins would diffuse to rigid domains, respectively. Intriguingly calculations suggested that proteins with an asymmetric shape would prefer asymmetric lipid bilayers. This correlates with membrane asymmetry found in natural systems, a feature which is needed for physiological function, and therefore might be a significant lead as to the understanding the origin membrane asymmetry.

Research institution(s)
  • Universität Graz - 100%
International project participants
  • Kai Simons, Max-Planck-Institut für - Germany
  • Daniel Harries, The Hebrew University of Jerusalem - Israel
  • Siewert-Jan Marrink, University of Groningen - Netherlands
  • Norbert Kucerka, Joint Institute for Nuclear Research - Russia
  • Zoran Arsov, Jozef Stefan Institute - Slovenia
  • George Khelashvili, Cornell University - USA
  • Gerald W. Feigenson, Cornell University - USA
  • Frederick A. Heberle, Oak Ridge National Laboratory - USA
  • John Katsaras, Oak Ridge National Laboratory - USA
  • Ilya Levental, University of Virginia - USA

Research Output

  • 838 Citations
  • 46 Publications
Publications
  • 2014
    Title Characterization of Phosphatidylcholine/Tween-80 Model Membranes for the NMR Study of Membrane Interactions
    DOI 10.1016/j.bpj.2013.11.2804
    Type Journal Article
    Author Gravel A
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Monolayer Spontaneous Curvature of Raft-Forming Membrane Lipids
    DOI 10.1016/j.bpj.2013.11.2802
    Type Journal Article
    Author Kollmitzer B
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Lipid Order Investigations Combined with Generalized Polarization Provide Deeper Insights into Plasma Membrane Architecture of Live Cells
    DOI 10.1016/j.bpj.2013.11.2851
    Type Journal Article
    Author Kress A
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Protein Partitioning in Liquid-Ordered (LO) / Liquid-Disordered (LD) Domains Depends on Lipid Composition and Protein Shape
    DOI 10.1016/j.bpj.2013.11.2853
    Type Journal Article
    Author Kollmitzer B
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title The Effect of Ectoins on the Structural Organization of the Tear Fluid Monolayer
    DOI 10.1016/j.bpj.2013.11.2850
    Type Journal Article
    Author Galla H
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Kinetic Study of Photo-Induced Lipid Oxidation in Giant Unilamellar Vesicles
    DOI 10.1016/j.bpj.2013.11.2805
    Type Journal Article
    Author Sankhagowit S
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Chelating Agent Induction of Multiphase Coexistence in Lipid Multilayers
    DOI 10.1016/j.bpj.2014.11.500
    Type Journal Article
    Author Weisman M
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Crystal Structures of the Ryanodine Receptor SPRY2 Domain
    DOI 10.1016/j.bpj.2014.11.1868
    Type Journal Article
    Author Lau K
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Cell Cycle Position Determines Critical Temperatures in Plasma Membrane Vesicles
    DOI 10.1016/j.bpj.2014.11.505
    Type Journal Article
    Author Gray E
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title On scattered waves and lipid domains: detecting membrane rafts with X-rays and neutrons
    DOI 10.1039/c5sm01807b
    Type Journal Article
    Author Marquardt D
    Journal Soft Matter
    Pages 9055-9072
    Link Publication
  • 2015
    Title Medium Matters: Order through Fluctuations?
    DOI 10.1016/j.bpj.2015.05.008
    Type Journal Article
    Author Parikh A
    Journal Biophysical Journal
    Pages 2751-2753
    Link Publication
  • 2015
    Title Multiple Closed States of the Ryanodine Receptor Determined by CRYOEM
    DOI 10.1016/j.bpj.2014.11.1867
    Type Journal Article
    Author Castro-Hartmann P
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Membrane Domain Interactions by Monte Carlo Type Analysis of Osmotic Stress Data
    DOI 10.1016/j.bpj.2014.11.502
    Type Journal Article
    Author Kollmitzer B
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Structural Studies of IP3R by Cryoem
    DOI 10.1016/j.bpj.2014.11.1866
    Type Journal Article
    Author Jiang Q
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Influence of Domain Size on Structure and Elastic Fluctuations in Complex Lipid Mixtures
    DOI 10.1016/j.bpj.2014.11.1871
    Type Journal Article
    Author Heftberger P
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Hydrocarbon Thickness Dictates Cholesterol's Location, Orientation and Motion in a Phospholipid Bilayer
    DOI 10.1016/j.bpj.2014.11.501
    Type Journal Article
    Author Marquardt D
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title How do Cholesterol and Saturated Sphingolipids Affect Acyl Chain Order in the Fluid Phase of Binary POPC Bilayers - a Study with 1-oleoyl-2-propionyl-DPH-sn-glycero-3-phosphocholine
    DOI 10.1016/j.bpj.2014.11.503
    Type Journal Article
    Author Engberg O
    Journal Biophysical Journal
    Link Publication
  • 2017
    Title Terrestrial adaptation of green algae Klebsormidium and Zygnema (Charophyta) involves diversity in photosynthetic traits but not in CO2 acquisition
    DOI 10.1007/s00425-017-2741-5
    Type Journal Article
    Author Pierangelini M
    Journal Planta
    Pages 971-986
    Link Publication
  • 2017
    Title Complex biomembrane mimetics on the sub-nanometer scale
    DOI 10.1007/s12551-017-0275-5
    Type Journal Article
    Author Heberle F
    Journal Biophysical Reviews
    Pages 353-373
    Link Publication
  • 2015
    Title Interaction of HIV-1 Gag Protein's Ma Membrane Binding Domain with Membrane Mimics Probed by Low- and Wide-Angle X-Ray Scattering
    DOI 10.1016/j.bpj.2014.11.1870
    Type Journal Article
    Author O’Neil L
    Journal Biophysical Journal
    Link Publication
  • 2015
    Title Structure and interactions of raft-like domains.
    Type Journal Article
    Author Kollmitzer B
    Journal European Biophysics Journal with Biophysics Letters
  • 2015
    Title Bending Rigidities and Interdomain Forces in Membranes with Coexisting Lipid Domains
    DOI 10.1016/j.bpj.2015.05.003
    Type Journal Article
    Author Kollmitzer B
    Journal Biophysical Journal
    Pages 2833-2842
    Link Publication
  • 2023
    Title Quantitative Comparison against Experiments Reveals Imperfections in Force Fields' Descriptions of POPC-Cholesterol Interactions.
    DOI 10.1021/acs.jctc.3c00648
    Type Journal Article
    Author Heftberger P
    Journal Journal of chemical theory and computation
    Pages 6342-6352
  • 2023
    Title Quantitative Comparison Against Experiments Reveals Imperfections in Force Fields' Descriptions of Phospholipid-Cholesterol Interactions
    DOI 10.26434/chemrxiv-2023-kz2lk
    Type Preprint
    Author Heftberger P
  • 2023
    Title Quantitative Comparison against Experiments Reveals Imperfections in Force Fields' Descriptions of POPC-Cholesterol Interactions
    DOI 10.17169/refubium-41844
    Type Other
    Author Heftberger P
    Link Publication
  • 2015
    Title In Situ Determination of Structure and Fluctuations of Coexisting Fluid Membrane Domains
    DOI 10.1016/j.bpj.2014.11.3488
    Type Journal Article
    Author Heftberger P
    Journal Biophysical Journal
    Pages 854-862
    Link Publication
  • 2015
    Title Bending rigidities and interdomain forces in membranes with coexisting lipid domains
    DOI 10.48550/arxiv.1502.07472
    Type Preprint
    Author Kollmitzer B
  • 2015
    Title Phase Coexistence in Lipid Membranes Induced by Buffering Agents and Charged Lipid Headgroups
    DOI 10.1016/j.bpj.2014.11.1872
    Type Journal Article
    Author Johnson M
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Integrins and Urokinase Receptors Show Distinct Mechanisms of Protein Sequestration in Raft-Mimicking Lipid Mixtures: Influence of Bilayer Asymmetry, Ligand Binding, and Cholesterol Content
    DOI 10.1016/j.bpj.2013.11.2801
    Type Journal Article
    Author Ge Y
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Temperature Dependence of Lo/Ld Domain Thickness and Elasticity by Global Saxs Data Analysis
    DOI 10.1016/j.bpj.2013.11.2863
    Type Journal Article
    Author Heftberger P
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Spin Labels Detect the Coexistence of Two Lipid Domains Along the Anomalous Gel-Fluid Transition of Anionic Dmpg Bilayers
    DOI 10.1016/j.bpj.2013.11.2852
    Type Journal Article
    Author Pellegrina D
    Journal Biophysical Journal
    Link Publication
  • 2013
    Title Protein partitioning in liquid-ordered (Lo)/liquid-disordered (Ld) domains.
    Type Conference Proceeding Abstract
    Author Kollmitzer B
    Conference Springer (Hg.): 9th European Biophysics Congress, 13-17 July 2013, Lisbon, Portugal. 2013.
  • 2013
    Title Monolayer spontaneous curvature of raft-forming membrane lipids
    DOI 10.1039/c3sm51829a
    Type Journal Article
    Author Kollmitzer B
    Journal Soft Matter
    Pages 10877-10884
    Link Publication
  • 2013
    Title Hybrid and Nonhybrid Lipids Exert Common Effects on Membrane Raft Size and Morphology
    DOI 10.1021/ja407624c
    Type Journal Article
    Author Heberle F
    Journal Journal of the American Chemical Society
    Pages 14932-14935
  • 2014
    Title Hybrid and Nonhybrid Lipids Exert Common Effects on Membrane Raft Size and Morphology
    DOI 10.1016/j.bpj.2013.11.2803
    Type Journal Article
    Author Doktorova M
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Solubilization of Giant Vesicles Composed of Erythrocyte Lipid Extracts and of Ternary Lipid Mixtures by Triton X-100
    DOI 10.1016/j.bpj.2013.11.2806
    Type Journal Article
    Author Casadei B
    Journal Biophysical Journal
    Link Publication
  • 2014
    Title Perturbation of Plasma Membrane Physical Properties by Endogenous and Exogenous Mediators Affects Cell Function
    DOI 10.1016/j.bpj.2013.11.2854
    Type Journal Article
    Author Levental K
    Journal Biophysical Journal
    Link Publication
  • 2013
    Title Advancing high resolution structural analysis of lipid membranes using a genetic algorithm.
    Type Conference Proceeding Abstract
    Author Heftberger B
    Conference Springer (Hg.): 9th European Biophysics Congress, 13-17 July 2013, Lisbon, Portugal. 2013
  • 2013
    Title Global small-angle X-ray scattering data analysis for multilamellar vesicles: the evolution of the scattering density profile model
    DOI 10.1107/s1600576713029798
    Type Journal Article
    Author Heftberger P
    Journal Journal of Applied Crystallography
    Pages 173-180
    Link Publication
  • 2013
    Title Chapter Four Coupling Membrane Elasticity and Structure to Protein Function
    DOI 10.1016/b978-0-12-411515-6.00004-7
    Type Book Chapter
    Author Pabst G
    Publisher Elsevier
    Pages 81-109
  • 2013
    Title Calculating the Bending Modulus for Multicomponent Lipid Membranes in Different Thermodynamic Phases
    DOI 10.1021/ct400492e
    Type Journal Article
    Author Khelashvili G
    Journal Journal of Chemical Theory and Computation
    Pages 3866-3871
    Link Publication
  • 2013
    Title Global SAXS data analysis for multilamellar vesicles: Evolution of the scattering density profile (SDP) model
    DOI 10.48550/arxiv.1309.5237
    Type Preprint
    Author Heftberger P
  • 2013
    Title Monolayer Spontaneous Curvature of Raft-Forming Membrane Lipids
    DOI 10.48550/arxiv.1307.0367
    Type Preprint
    Author Kollmitzer B
  • 2016
    Title Membrane Domains on the Sub-Nanometer Scale
    DOI 10.1016/j.bpj.2015.11.071
    Type Journal Article
    Author Pabst G
    Journal Biophysical Journal
    Link Publication
  • 2016
    Title Lateral pressure-mediated protein partitioning into liquid-ordered/liquid-disordered domains
    DOI 10.1039/c6sm00042h
    Type Journal Article
    Author Frewein M
    Journal Soft Matter
    Pages 3189-3195
    Link Publication
  • 2016
    Title Atomistic resolution structure and dynamics of lipid bilayers in simulations and experiments
    DOI 10.1016/j.bbamem.2016.01.019
    Type Journal Article
    Author Ollila O
    Journal Biochimica et Biophysica Acta (BBA) - Biomembranes
    Pages 2512-2528
    Link Publication

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