Elucidating the Self-assembly of Lactobacilli surface-Layer Proteins
Elucidating the Self-assembly of Lactobacilli surface-Layer Proteins
Disciplines
Biology (100%)
Keywords
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S-layers,
Lactobacillus,
3D-structure,
Self-assembly,
Teichoic acids,
Structural biology
Surface layers (S-layers) are protein coats displayed on the external surface of many bacterial and archaeal species. They are unique between different species. In pathogenic bacteria, S- layers contribute to virulence as they provide a large surface area for interaction with host cells which implies tremendous implications for the immune response and human disease. Nevertheless, the underlying mechanisms of S-layers are poorly understood, primarily due to lack of structural knowledge. The tendency of wild-type S-layer proteins to form two- dimensional-crystalline lattices makes it very difficult to produce three-dimensional-crystals, which are the prerequisite for crystallographic structure determination. In this project, we focus on the structural and functional characterization of S-layer proteins and their domains from lactobacilli. Lactobacilli belong to the generally recognized as safe (GRAS) microorganism and represent health-promoting factors to their host. As the outermost layer in different species of lactobacilli, the S-layers are in direct contact with the bacterial environment and thus involved in many of their surface properties, e.g. adhesion to epithelial cells and to intestinal components. Therefore, the structural investigation of surface properties of lactobacilli possessing S-layers will provide the basis for understanding both, the mechanism involved in adhesion properties and the biological functions of the S-layer. Novel in our current approach is the structure determination of distinct domains of the S-layer protein in combination with different complimentary methods, such as nuclear magnetic resonance spectroscopy, mass spectrometry, electron microscopy and biochemical methods. Consequently, the outcome of these studies will have a prominent impact on our ability to exploit S-layer proteins, including the development of novel components for vaccines against infectious diseases.
- Universität Graz - 100%
- Airi Palva, Helsinki University - Finland
- Janet Vonck, Max-Planck-Institut für Biophysik - Germany
Research Output
- 4371 Citations
- 18 Publications
- 5 Policies
- 1 Methods & Materials
- 10 Datasets & models
- 20 Disseminations
- 7 Scientific Awards
- 14 Fundings
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2018
Title Structure and Catalytic Mechanism of a Bacterial Friedel–Crafts Acylase DOI 10.1002/cbic.201800462 Type Journal Article Author Pavkov-Keller T Journal ChemBioChem Pages 88-95 Link Publication -
2018
Title The crystal structure of monoacylglycerol lipase from M. tuberculosis reveals the basis for specific inhibition DOI 10.1038/s41598-018-27051-7 Type Journal Article Author Aschauer P Journal Scientific Reports Pages 8948 Link Publication -
2025
Title Structural basis of phosphorylation-independent nuclear import of CIRBP by TNPO3 DOI 10.1038/s41467-025-59802-2 Type Journal Article Author Zhou Q Journal Nature Communications Pages 4456 Link Publication -
2022
Title Accurate prediction of protein structures and interactions using a three-track neural network DOI 10.1530/ey.19.15.15 Type Journal Article Author M B Journal Yearbook of Paediatric Endocrinology Link Publication -
2021
Title Accurate prediction of protein structures and interactions using a 3-track network DOI 10.1101/2021.06.14.448402 Type Preprint Author Baek M Pages 2021.06.14.448402 Link Publication -
2019
Title Abstracts LB PDS DOI 10.1111/all.13960 Type Journal Article Journal Allergy Pages 333-376 Link Publication -
2019
Title Structure and Catalytic Mechanism of a Bacterial Friedel-Crafts Acylase DOI 10.3204/pubdb-2024-00974 Type Other Author Pavkov-Keller T Link Publication -
2021
Title Surface layer proteins of Lactobacillus acidophilus – a story of SlpA and SlpX DOI 10.1107/s0108767321088449 Type Journal Article Author Sagmeister T Journal Acta Crystallographica Section A Foundations and Advances Link Publication -
2024
Title The molecular architecture of Lactobacillus S-layer: Assembly and attachment to teichoic acids DOI 10.1073/pnas.2401686121 Type Journal Article Author Sagmeister T Journal Proceedings of the National Academy of Sciences Link Publication -
2019
Title Master Thesis - Characterization of altiarchaeal grappling hooks Hami from Candidatus Altiarchaeum hamiconexum and self-assembly-domain of SlpA Surface-Layer protein from Lactobacillus acidophilus Type Other Author Theo Sagmeister Link Publication -
2019
Title Master Thesis - Structural and biophysical Characterization of SlpX of Lactobacillus acidophilus Type Other Author Elisabeth Damisch Link Publication -
2022
Title The interaction of the Lactobacilli surface layer proteins with the lipotheichoic acids from the cell wall DOI 10.1107/s2053273322096085 Type Journal Article Author Gubensäk N Journal Acta Crystallographica Section A Foundations and Advances -
2024
Title The molecular architecture of Lactobacillus S-Layer: Assembly and attachment to teichoic acids DOI 10.21203/rs.3.rs-3689109/v1 Type Preprint Author Sagmeister T Link Publication -
2021
Title Accurate prediction of protein structures and interactions using a three-track neural network DOI 10.1126/science.abj8754 Type Journal Article Author Baek M Journal Science Pages 871-876 Link Publication -
2021
Title Structural Changes in the Cap of Rv0183/mtbMGL Modulate the Shape of the Binding Pocket DOI 10.3390/biom11091299 Type Journal Article Author Grininger C Journal Biomolecules Pages 1299 Link Publication -
2022
Title Solution of the protein structure prediction problem at last: crucial innovations and next frontiers. DOI 10.12703/r-01-0000020 Type Journal Article Author Agard D Journal Faculty reviews Pages 38 Link Publication -
2021
Title Master Thesis - Binding of LTA to the bacterial S-layer proteins Type Other Author Azmoudeh Pupak Link Publication -
2021
Title Biophysical and structural insights into cell wall associated proteins and allergens Type Other Author Markus Eder Link Publication
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2021
Link
Title RosettaFold publication DOI 10.1126/science.abj8754 Type Contribution to new or Improved professional practice Link Link -
2020
Title Interaction studies by ITC Type Influenced training of practitioners or researchers -
2020
Link
Title Advisory board of the Core Facility "Ultrastructure Analysis" Type Participation in a guidance/advisory committee Link Link -
2018
Title ARCIMBOLDO Workshop Type Influenced training of practitioners or researchers -
2017
Title NESY Winterschool Type Influenced training of practitioners or researchers
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0
Title Upgrade of transmission electron microscope for cryoEM measurements Type Improvements to research infrastructure
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2021
Link
Title Crystal structure of SlpX_ac, domain II, heavy atom derivative, different sub-domain conformations (PDB: 7QFK) DOI 10.2210/pdb7QFK/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of SlpX_ac, domain I (PDB: 7QFI) DOI 10.2210/pdb7QFI/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of SlpX_ac, domain II (PDB: 7QFJ) DOI 10.2210/pdb7QFJ/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of SlpA_amy domain I (PDB: 7QLH) DOI 10.2210/pdb7QLH/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of SlpA_ac domain III (PDB: 7QFG) DOI 10.2210/pdb7QFG/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of Adenylosuccinate Synthetase from H. pylori in complex with HDA, GDP, IMO, Mg (PDB: 6ZXQ) Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of mtbMGL K74A (Closed Cap Conformation) (PDB: 7OZM) DOI 10.2210/pdb7ozm/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of mtbMGL K74A (Substrate Analog Complex) (PDB: 7P0Y) DOI 10.2210/pdb7p0y/pdb Type Database/Collection of data Public Access Link Link -
2021
Link
Title Crystal structure of SlpA_ac domain II (PDB: 7QFL) DOI 10.2210/pdb7QFL/pdb Type Database/Collection of data Public Access Link Link -
2017
Link
Title Crystal structure of surface layer protein SbsC, calcium binindg domains 6-7 (PDB: 5FTY) DOI 10.2210/pdb5fty/pdb Type Database/Collection of data Public Access Link Link
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2021
Title Press release - der Standard Type A press release, press conference or response to a media enquiry/interview -
2020
Title Talk LST, Markus Eder Type A talk or presentation -
2018
Title Talk ÖGMBT 2018, Markus Eder Type A talk or presentation -
2018
Title "Open house day" 2018, at the University of Graz Type Participation in an open day or visit at my research institution -
2020
Title Cryo-EM in the 21st century Type A talk or presentation -
2021
Title Press release studium.at Type A press release, press conference or response to a media enquiry/interview -
2017
Title Talk IUPAB and EBSA congress, Tea Pavkov-Keller Type A talk or presentation -
2018
Title Talk Elli, Elisabeth Damisch Type A talk or presentation -
2021
Title Press release - Die Presse Type A press release, press conference or response to a media enquiry/interview -
2018
Title Talk ECM31, Tea Pavkov-Keller Type A talk or presentation -
2018
Title Talk BioNanoMed 2018, Tea Pavkov-Keller Type A talk or presentation -
2021
Title Press release Uni-Graz Type A press release, press conference or response to a media enquiry/interview -
2017
Title Talk ESIB 2017, Tea Pavkov-Keller Type A talk or presentation -
2021
Title Press release APA Type A press release, press conference or response to a media enquiry/interview -
2021
Title Organization of "Frontiers in Integrative Structural Biology" event Type Participation in an activity, workshop or similar -
2021
Title Talk EJTEMM 2021, Nina Gubensäk Type A talk or presentation -
2018
Title Talk ME, Markus Eder Type A talk or presentation -
2021
Title "Open house day" 2021, at the University of Graz Type Participation in an open day or visit at my research institution -
2021
Title Press release 5min.at Type A press release, press conference or response to a media enquiry/interview -
2021
Title Press release kurier.at Type A press release, press conference or response to a media enquiry/interview
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2021
Title Poster prize for Theo Sagmeister, Frontiers in Structural Biology Type Poster/abstract prize Level of Recognition National (any country) -
2021
Title EMBO short term fellowship for Christoph Grininger Type Awarded honorary membership, or a fellowship, of a learned society Level of Recognition Continental/International -
2019
Title Poster prize for Markus Eder, EACCI Congress Type Poster/abstract prize Level of Recognition Continental/International -
2019
Title Poster prize for Theo Sagmeister, doc.days Type Poster/abstract prize Level of Recognition Regional (any country) -
2019
Title Visit Igor Bubic Type Attracted visiting staff or user to your research group Level of Recognition Continental/International -
2018
Title Keynote speaker at EMBO Workshop Type Personally asked as a key note speaker to a conference Level of Recognition Continental/International -
2018
Title Poster prize for Markus Eder, TE Symposium Type Poster/abstract prize Level of Recognition Continental/International
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2020
Title Infrastructure - SpectroLight 610, Xtal Concepts Type Capital/infrastructure (including equipment) Start of Funding 2020 Funder Field of Excellence BioHealth, Graz -
2017
Title cryoEM - TEM upgrade, cryo stage and detector for Zeiss Libra 120KV + Leica GP2 vitrification robot Type Capital/infrastructure (including equipment) Start of Funding 2017 Funder Nawi Graz, University of Graz -
2019
Title GoStyria mobility grant for I. Bubic (Institute of Rudjer Boskovic, Zagreb, Croatia) Type Fellowship Start of Funding 2019 Funder University of Graz -
2021
Title The sensory regulation of virulence in Vibrio cholerae Type Other Start of Funding 2021 Funder Austrian Science Fund (FWF) -
2021
Title DOC130 - BioMolStruct Type Research grant (including intramural programme) Start of Funding 2021 Funder Austrian Science Fund (FWF) -
2020
Title FFG COMET / Innophore, ACIB - Novel industrial enzymes Type Research grant (including intramural programme) Start of Funding 2020 Funder Austrian Research Promotion Agency -
2017
Title Travel grant - Integrative structural biology, International school of crystallography, Erice, Italy for Markus Eder Type Travel/small personal Start of Funding 2017 Funder Ettore Majorana Foundation and Centre for Scientific Culture -
2018
Title Travel grant - EMBO Practical Course "Characterisation of macromolecular complexes by integrative structural biology" for Markus Eder Type Travel/small personal Start of Funding 2018 Funder European Molecular Biology Organisation -
2017
Title Travel grant - Structural Mass Spectrometry Workshop, Weizmann Institute, Istrael for Markus Eder Type Travel/small personal Start of Funding 2017 Funder Federation of European Biochemical Societies (FEBS) -
2018
Title Travel grant - 31st European crystallographic Meeting, Oviedo, Spain for Elisabeth Damisch Type Travel/small personal Start of Funding 2018 Funder International Union of Crystallography (IUCr) -
2017
Title Travel grant - 11th European Biophysical Societies' Association (EBSA) Congress in Edinburgh, Scotland for Tea Pavkov-Keller Type Travel/small personal Start of Funding 2017 -
2019
Title Travel grant - ProLin "Protein-Lipid Nanostructures: From Domains to Devices", Bilbao, Spain for Djenana Vejzovic Type Travel/small personal Start of Funding 2019 -
2019
Title Travel grant - ProLin "Protein-Lipid Nanostructures: From Domains to Devices", Bilbao, Spain for Theo Sagmeister Type Travel/small personal Start of Funding 2019 -
2020
Title Travel grant - CCP4 Study Weekend 2020, Nottingham, UK for Theo Sagmeister Type Travel/small personal Start of Funding 2020 Funder Science and Technologies Facilities Council (STFC)