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Structure and function of invertebrate Golgi hexosaminidases

Structure and function of invertebrate Golgi hexosaminidases

Iain B. Wilson (ORCID: 0000-0001-8996-1518)
  • Grant DOI 10.55776/P29466
  • Funding program Principal Investigator Projects
  • Status ended
  • Start December 1, 2016
  • End November 30, 2021
  • Funding amount € 349,671
  • Project website

Disciplines

Biology (100%)

Keywords

    Hexosaminidases, Golgi, Nematode, Insect, Inhibitors, N-glycan

Abstract Final report

Hexosaminidases are ubiquituous enzymes with multiple roles in glycoconjugate metabolism as they remove terminal N-acetylhexosamine residues from glycans, glycolipids, glycoproteins and glycosaminoglycans; whereas these enzymes are catabolic in mammals, in non-vertebrate species they are often mediating purposeful processing steps during the maturation of N-linked oligosaccharides on proteins (analogous to mannosidases in the endoplasmic reticulum and Golgi apparatus). However, the biological significance of, and the structural basis for, hexosaminidase-mediated glycan-processing in non-vertebrates are poorly understood. In this proposal project, the aim is to understand the substrate specificity of nematode and insect hexosaminidases in terms of the amino acid residues involved in recognition/catalysis and explore whether deletion of nematode hexosaminidase genes has an effect on responses to stress and infection. Convergent evolution may explain that phylogentically-diverse insect and nematode hexosaminidases have the same glycan processing function.

Hexosaminidases are ubiquituous enzymes with multiple roles in glycoconjugate metabolism as they remove terminal N-acetylhexosamine residues from glycans, glycolipids, glycoproteins and glycosaminoglycans; whereas these enzymes are catabolic in mammals, in non-vertebrate species they are often mediating purposeful processing steps during the maturation of N-linked oligosaccharides on proteins (analogous to mannosidases in the endoplasmic reticulum and Golgi apparatus). However, the biological significance of, and the structural basis for, hexosaminidase-mediated glycan-processing in non-vertebrates are poorly understood. In this project, we have identified hexosaminidase genes from parasitic nematodes and characterised one such hexosaminidase in recombinant form, comparing its properties to those from other species. Furthermore, the impact of knocking-out hexosaminidase genes in the model organism, Caenorhabditis elegans, was assessed. An obvious molecular change in terms of the N-linked oligosaccharides was observed showing that multiple hexosaminidases alter these structures and so determine the final form of post-translational modifications of proteins.

Research institution(s)
  • Universität für Bodenkultur Wien - 100%
International project participants
  • Keith A. Stubbs, The University of Western Australia - Australia
  • Juraj Kona, Slovak Academy of Sciences - Slovakia
  • Markus Künzler, Eidgenössische Technische Hochschule Zürich - Switzerland
  • Jonathan A. Hodgkin, University of Oxford
  • Tracey M. Gloster, University of St. Andrews

Research Output

  • 229 Citations
  • 20 Publications
  • 2 Datasets & models
  • 1 Scientific Awards
Publications
  • 2020
    Title Sulfated and sialylated N-glycans in the echinoderm Holothuria atra reflect its marine habitat and phylogeny
    DOI 10.1074/jbc.ra119.011701
    Type Journal Article
    Author Vanbeselaere J
    Journal Journal of Biological Chemistry
    Pages 3159-3172
    Link Publication
  • 2023
    Title Structural and bioinformatics approaches to study glycobiology
    Type PhD Thesis
    Author Zuzanna Dutkiewicz
  • 2022
    Title 1,4-Dideoxy-1,4-imino- d - and l -lyxitol-based inhibitors bind to Golgi a-mannosidase II in different protonation forms
    DOI 10.1039/d2ob01545e
    Type Journal Article
    Author Kóna J
    Journal Organic & Biomolecular Chemistry
    Pages 8932-8943
    Link Publication
  • 2023
    Title Bioinformatic, enzymatic and structural characterization of Trichuris suis hexosaminidase HEX-2
    DOI 10.1101/2023.11.15.567194
    Type Preprint
    Author Dutkiewicz Z
    Pages 2023.11.15.567194
    Link Publication
  • 2023
    Title Increasing Complexity of the N-Glycome During Caenorhabditis Development.
    DOI 10.1016/j.mcpro.2023.100505
    Type Journal Article
    Author Wilson Ibh
    Journal Molecular & cellular proteomics : MCP
    Pages 100505
  • 2024
    Title Core Tri-fucosylation of Nematode N-glycans Requires Golgi a-mannosidase III Activity that Impacts Animal Growth and Behaviours
    DOI 10.1101/2024.07.18.600072
    Type Preprint
    Author Kendler J
    Pages 2024.07.18.600072
  • 2024
    Title Recognition of Highly Branched N-Glycans of the Porcine Whipworm by the Immune System
    DOI 10.1016/j.mcpro.2024.100711
    Type Journal Article
    Author Eckmair B
    Journal Molecular & Cellular Proteomics
    Pages 100711
    Link Publication
  • 2019
    Title Sweet and CRISP(R)y parasite engineering
    DOI 10.1074/jbc.h118.007210
    Type Journal Article
    Author Wilson I
    Journal Journal of Biological Chemistry
    Pages 1126-1127
    Link Publication
  • 2019
    Title Anionic and zwitterionic moieties as widespread glycan modifications in non-vertebrates
    DOI 10.1007/s10719-019-09874-2
    Type Journal Article
    Author Paschinger K
    Journal Glycoconjugate Journal
    Pages 27-40
    Link Publication
  • 2021
    Title Glycomics, Glycoproteomics, and Glycogenomics: An Inter-Taxa Evolutionary Perspective
    DOI 10.1074/mcp.r120.002263
    Type Journal Article
    Author West C
    Journal Molecular & Cellular Proteomics
    Pages 100024
    Link Publication
  • 2024
    Title Analysis of Caenorhabditis Protein Glycosylation
    DOI 10.1007/978-1-0716-3666-4_8
    Type Book Chapter
    Author Paschinger K
    Publisher Springer Nature
    Pages 123-138
  • 2024
    Title N-glycan core tri-fucosylation requires Golgi a-mannosidase III activity that impacts nematode growth and behavior
    DOI 10.1016/j.jbc.2024.107944
    Type Journal Article
    Author Kendler J
    Journal Journal of Biological Chemistry
    Pages 107944
    Link Publication
  • 2024
    Title Bioinformatic, Enzymatic, and Structural Characterization of Trichuris suis Hexosaminidase HEX-2
    DOI 10.1021/acs.biochem.4c00187
    Type Journal Article
    Author Dutkiewicz Z
    Journal Biochemistry
    Pages 1941-1954
    Link Publication
  • 2019
    Title Comparisons of N-glycans across invertebrate phyla
    DOI 10.1017/s0031182019000398
    Type Journal Article
    Author Paschinger K
    Journal Parasitology
    Pages 1733-1742
    Link Publication
  • 2025
    Title Glycoproteomic and Single-Protein Glycomic Analyses Reveal Zwitterionic N-Glycans on Natural and Recombinant Proteins Derived From Insect Cells
    DOI 10.1016/j.mcpro.2025.100981
    Type Journal Article
    Author Yan S
    Journal Molecular & Cellular Proteomics
    Pages 100981
    Link Publication
  • 2018
    Title Glycomics Studies on Nematodes Elucidate Conserved Functional Epitopes and Biosynthetic Pathways
    DOI 10.1096/fasebj.2018.32.1_supplement.673.17
    Type Journal Article
    Author Yan S
    Journal The FASEB Journal
    Pages 673.17-673.17
  • 2018
    Title N-Benzyl Substitution of Polyhydroxypyrrolidines: The Way to Selective Inhibitors of Golgi a-Mannosidase II
    DOI 10.1002/cmdc.201700607
    Type Journal Article
    Author Šesták S
    Journal ChemMedChem
    Pages 373-383
    Link Publication
  • 2017
    Title Core Richness of N-Glycans of Caenorhabditis elegans: A Case Study on Chemical and Enzymatic Release
    DOI 10.1021/acs.analchem.7b03898
    Type Journal Article
    Author Yan S
    Journal Analytical Chemistry
    Pages 928-935
    Link Publication
  • 2018
    Title Ablation of N-acetylglucosaminyltransferases in Caenorhabditis induces expression of unusual intersected and bisected N-glycans
    DOI 10.1016/j.bbagen.2018.07.002
    Type Journal Article
    Author Yan S
    Journal Biochimica et Biophysica Acta (BBA) - General Subjects
    Pages 2191-2203
    Link Publication
  • 2023
    Title N-glycan antennal modifications are altered in Caenorhabditis elegans lacking the HEX-4 N-acetylgalactosamine-specific hexosaminidase
    DOI 10.1016/j.jbc.2023.103053
    Type Journal Article
    Author Paschinger K
    Journal Journal of Biological Chemistry
    Pages 103053
    Link Publication
Datasets & models
  • 2023 Link
    Title Stage-specific N-glycosylation of C. elegans
    DOI 10.50821/glycopost-gpst000294
    Type Database/Collection of data
    Public Access
    Link Link
  • 2023 Link
    Title N-acetylgalactosamine as a chain termination signal in nematode N-glycan biosynthesis: Impact of ablation of a hexosaminidase
    DOI 10.50821/glycopost-gpst000200
    Type Database/Collection of data
    Public Access
    Link Link
Scientific Awards
  • 2024
    Title ASBMB/MCP Lecture
    Type Research prize
    Level of Recognition Continental/International

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