Disciplines
Biology (100%)
Keywords
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Bioadhesion,
Flatworms,
Bioadhesives,
Platyhelminthes
Synthetic adhesives are widely used in our daily lives, in medicine and industry. These man-made glues usually contain toxic or carcinogenic components. In contrast, biological adhesives produced by animals and plants are non-toxic, tissue compatible, function under wet conditions, nevertheless they perform extremely well in their natural environment. However, little is known about the mechanisms underlying biological adhesives. It is the goal to generate novel biomimetic glues for biomedicine and industrial applications. Flatworms possess a duo-gland adhesive system which allows them to rapidly attach and release from any substrate. The flatworm adhesive system consists of few to hundreds adhesive organs, composed of three cell types - an adhesive gland cell which secretes the glue, a releasing gland cell which is secreting the detachment component, and an anchor cell, a modified epidermal cell with long enforced microvilli for structural stabilization. Flatworms occur in diverse habitats from marine to freshwater environments, in calm waters but also wave exposed beaches. Certain parasitic flatworm taxa use adhesive pads with secretions to attach to the host. In the proposed project we aim identifying novel proteins that are involved in biological adhesion and release in 20 diverse flatworm species. The species are carefully selected to cover the major taxa of the Platyhelminthes. In addition, the selection encompasses species from marine, brackish, and freshwater habitats and a parasitic species which attaches to the skin of a fish using adhesive secretions. Furthermore, the selection includes species occurring in low tide regions, in high energy beaches, in lakes, in calm freshwater environments, on horseshoe crabs, in sand, under stones, or on plants. Finally, species were selected according to their availability and experimental accessibility. We hypothesize that flatworms have evolved adaptations to meet the requirements for adhesion in the respective environment. This notion is supported by the observation that one of the two adhesive proteins we identified in the flatworm Macrostomum lignano do not show any homologs in a transcriptome database of 61 other flatworm species of which data are available in public databases or form own pilot studies. In the past years we have established a state-of-the-art methodological toolbox to study bioadhesion. This approach allowed us identifying and confirming the function of two adhesive proteins and two release candidates of two marine flatworm species and the freshwater polyp Hydra. This project brings together a well-suited selection of flatworm species, a proven methodological toolbox for adhesive identification, and, together with the collaborators, leading knowledge on flatworm biology and experimentation. The results will provide a list of diverse adhesive proteins which can serve as lead sequences for the production of flatworm-inspired biomimetic glues.
Many free-living Platyhelminthes (flatworms) can attach and release very rapidly from any natural substrate. This ability makes them suitable candidates to study temporary bioadhesion. We have identified two giant adhesion proteins which mediate attachment in the marine flatworm Macrostomum lignano. Based on a broad dataset, we were able to propose a novel model of flatworm temporary adhesion. The natural habitat of M. lignano is the lagoon of Venice, Italy and the animals live on low energy beaches between sand granules. We hypothesized that flatworm species from other habitats possess adapted adhesive proteins. Therefore, in this project, it was the goal to identify adhesion proteins of diverse flatworms form diverse environments including freshwater, brackish water, and marine environments. Notably, we have not found substantial variations in the identified regions of the adhesive proteins. To further characterize the adhesive biology of flatworms we studied the morphology of adhesive organs, sequenced all genes (transcriptomes) of several species, analysed the expression of the adhesive proteins (in situ hybridization) and switched off the production of the proteins (RNA interference) to study their involvement in the adhesion process. Due to the large size of the adhesive proteins, it was a challenge to identify their full amino acid sequence. For that reason, we established Oxford Nanopore long-read sequencing in the lab. Using this technology, it was possible to characterize the full length of the adhesive proteins. Commercial adhesives are often toxic and carcinogenic, might trigger allergies, and can cause environmental problems. Moreover, synthetic adhesives show a limited performance under wet conditions, especially in medical applications. In contrast, biological adhesives are biocompatible, biodegradable, non-toxic, and capable of adhering to a variety of surfaces, including underwater environments. Notably, flatworm glues are reversible: they can detach very rapidly and voluntarily from all natural surfaces. Therefore, biological reversible adhesives can fulfil the needs for novel glues in both industry and biomedicine. The findings of this project can help to find new adhesive proteins sequences for the generation synthetic adhesives for medical or industrial applications.
- Universität Innsbruck - 100%
Research Output
- 402 Citations
- 28 Publications
- 1 Policies
- 2 Methods & Materials
- 29 Datasets & models
- 11 Disseminations
- 1 Scientific Awards
- 3 Fundings
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2017
Title Organ specific gene expression in the regenerating tail of Macrostomum lignano DOI 10.1016/j.ydbio.2017.07.021 Type Journal Article Author Lengerer B Journal Developmental Biology Pages 448-460 Link Publication -
2020
Title Integrative Transcriptome and Proteome Analysis of the Tube Foot and Adhesive Secretions of the Sea Urchin Paracentrotus lividus DOI 10.3390/ijms21030946 Type Journal Article Author Pjeta R Journal International Journal of Molecular Sciences Pages 946 Link Publication -
2020
Title RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.1186/s12864-020-06862-x Type Journal Article Author Brand J Journal BMC Genomics Pages 462 Link Publication -
2019
Title Supplementary Figures, Tables, and Materials and Methods from Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.6084/m9.figshare.8960894 Type Other Author Pjeta R Link Publication -
2019
Title Supplementary Figures, Tables, and Materials and Methods from Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.6084/m9.figshare.8960894.v1 Type Other Author Pjeta R Link Publication -
2022
Title Sticking Together an Updated Model for Temporary Adhesion DOI 10.3390/md20060359 Type Journal Article Author Bertemes P Journal Marine Drugs Pages 359 Link Publication -
2022
Title New Hydra genomes reveal conserved principles of hydrozoan transcriptional regulation DOI 10.1101/2022.06.21.496857 Type Preprint Author Cazet J Pages 2022.06.21.496857 Link Publication -
2019
Title RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.5281/zenodo.3547572 Type Other Author Bertemes P Link Publication -
2019
Title RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.5281/zenodo.3547573 Type Other Author Bertemes P Link Publication -
2019
Title Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.3929/ethz-b-000364113 Type Other Author Pjeta Link Publication -
2021
Title (Un)expected Similarity of the Temporary Adhesive Systems of Marine, Brackish, and Freshwater Flatworms DOI 10.3390/ijms222212228 Type Journal Article Author Bertemes P Journal International Journal of Molecular Sciences Pages 12228 Link Publication -
2020
Title Acoel Single-Cell Transcriptomics: Cell Type Analysis of a Deep Branching Bilaterian DOI 10.1093/molbev/msaa333 Type Journal Article Author Duruz J Journal Molecular Biology and Evolution Pages 1888-1904 Link Publication -
2020
Title Additional file 13 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618194 Type Other Author Brand J Link Publication -
2020
Title Additional file 13 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618194.v1 Type Other Author Brand J Link Publication -
2020
Title Additional file 17 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618206 Type Other Author Brand J Link Publication -
2020
Title Additional file 17 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618206.v1 Type Other Author Brand J Link Publication -
2018
Title Properties of temporary adhesion systems of marine and freshwater organisms DOI 10.1242/jeb.182717 Type Journal Article Author Lengerer B Journal Journal of Experimental Biology -
2018
Title Papillae revisited and the nature of the adhesive secreting collocytes DOI 10.1016/j.ydbio.2018.11.012 Type Journal Article Author Zeng F Journal Developmental Biology Pages 183-198 Link Publication -
2023
Title A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. DOI 10.1101/gr.277040.122 Type Journal Article Author Cazet Jf Journal Genome research Pages 283-298 -
2021
Title Omics-based molecular analyses of adhesion by aquatic invertebrates DOI 10.1111/brv.12691 Type Journal Article Author Davey P Journal Biological Reviews Pages 1051-1075 Link Publication -
2020
Title RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.5451/unibas-ep87060 Type Other Author Brand Link Publication -
2020
Title The free-living flatworm Macrostomum lignano DOI 10.5451/unibas-ep87062 Type Other Author Egger Link Publication -
2020
Title RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.3929/ethz-b-000426889 Type Other Author Brand Link Publication -
2020
Title The free-living flatworm Macrostomum lignano DOI 10.1186/s13227-020-00150-1 Type Journal Article Author Wudarski J Journal EvoDevo Pages 5 Link Publication -
2017
Title Efficient transgenesis and annotated genome sequence of the regenerative flatworm model Macrostomum lignano DOI 10.1038/s41467-017-02214-8 Type Journal Article Author Wudarski J Journal Nature Communications Pages 2120 Link Publication -
2019
Title Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.1098/rstb.2019.0194 Type Journal Article Author Pjeta R Journal Philosophical Transactions of the Royal Society B Pages 20190194 Link Publication -
2019
Title A mechanism for temporary bioadhesion DOI 10.1073/pnas.1814230116 Type Journal Article Author Wunderer J Journal Proceedings of the National Academy of Sciences Pages 4297-4306 Link Publication -
2018
Title The structural and chemical basis of temporary adhesion in the sea star Asterina gibbosa DOI 10.3762/bjnano.9.196 Type Journal Article Author Lengerer B Journal Beilstein Journal of Nanotechnology Pages 2071-2086 Link Publication
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2023
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Title Hydra oligactis genome Type Database/Collection of data Public Access Link Link -
2022
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Title Theama mediterranea transcriptome, genome, differential gene expression Type Database/Collection of data Public Access Link Link -
2021
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Title Acoel Single-Cell Transcriptomics: Cell Type Analysis of a Deep Branching Bilaterian DOI 10.48350/182462 Type Database/Collection of data Public Access Link Link -
2021
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Title Macrostomum poznanienze transcriptome Type Database/Collection of data Public Access Link Link -
2021
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Title (Un)expected similarity of the temporary adhesive systems of marine, brackish, and freshwater flatworms DOI 10.5281/zenodo.5519226 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 19 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618212 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 2 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618218 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 3 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618221 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 4 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618224 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 5 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618227 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 6 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618230 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 7 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618233 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 8 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618236 Type Database/Collection of data Public Access Link Link -
2020
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Title Paracentrotus lividus transcriptome Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 16 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618203 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 11 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618188 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 14 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618197 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 15 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618200 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 1 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618215 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 10 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618185 Type Database/Collection of data Public Access Link Link -
2020
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Title Additional file 18 of RNA-Seq of three free-living flatworm species suggests rapid evolution of reproduction-related genes DOI 10.6084/m9.figshare.12618209 Type Database/Collection of data Public Access Link Link -
2019
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Title transcriptome and proteome data of Macrostomum lignano adhesion Type Database/Collection of data Public Access Link Link -
2019
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Title Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.3929/ethz-b-000364113 Type Database/Collection of data Public Access Link Link -
2019
Link
Title Supplementary data S1 on gene selection for expression screening and differential RNA-seq from Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.6084/m9.figshare.8960891.v1 Type Database/Collection of data Public Access Link Link -
2019
Link
Title Supplementary data S1 on gene selection for expression screening and differential RNA-seq from Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.6084/m9.figshare.8960891 Type Database/Collection of data Public Access Link Link -
2019
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Title Datasheets on Mass Spectrometry from Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.6084/m9.figshare.8960897.v1 Type Database/Collection of data Public Access Link Link -
2019
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Title Datasheets on Mass Spectrometry from Temporary adhesion of the proseriate flatworm Minona ileanae DOI 10.6084/m9.figshare.8960897 Type Database/Collection of data Public Access Link Link -
2018
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Title Organ specific gene expression in the regenerating tail of Macrostomum lignano DOI 10.3929/ethz-b-000226173 Type Database/Collection of data Public Access Link Link -
2018
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Title A targeted in situ hybridization screen identifies putative seminal fluid proteins in a simultaneously hermaphroditic flatworm DOI 10.6084/m9.figshare.c.4117889 Type Database/Collection of data Public Access Link Link
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2019
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Title Der Standard: Newspaper Article Type A press release, press conference or response to a media enquiry/interview Link Link -
2019
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Title Univeristy main Webpage report Type Engagement focused website, blog or social media channel Link Link -
2018
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Title Lange Nacht der Forschung Type Participation in an open day or visit at my research institution Link Link -
2019
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Title Die Presse: Newspaper Article Type A press release, press conference or response to a media enquiry/interview Link Link -
2019
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Title Newpaper Article: in "Der Schweiter Bauer" Type A press release, press conference or response to a media enquiry/interview Link Link -
2019
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Title Kronenzeitung: Zeitschriften Artikel Type A press release, press conference or response to a media enquiry/interview Link Link -
2019
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Title Laborjournal: Journal article Type A magazine, newsletter or online publication Link Link -
2018
Title Day care group visits Type Participation in an activity, workshop or similar -
2019
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Title Television appearance Type A press release, press conference or response to a media enquiry/interview Link Link -
2019
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Title FWF scilog: video of the Funding agency on our research Type Engagement focused website, blog or social media channel Link Link -
2019
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Title "Life Radio" Interview Type A press release, press conference or response to a media enquiry/interview Link Link
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2019
Title Best Poster Award Type Poster/abstract prize Level of Recognition Continental/International
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2019
Title AFR - PhD Grant for Philp Bertemes Type Fellowship Start of Funding 2019 Funder Fonds National de la Recherche (FNR) -
2022
Title Tiroler Wissenschaft Fond Type Research grant (including intramural programme) Start of Funding 2022 Funder Land Tirol -
2018
Title Glue characterization in centipedes Type Other Start of Funding 2018 Funder Austrian Science Fund (FWF)