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Bioinspired alkene cleavage - BioZone

Bioinspired alkene cleavage - BioZone

Florian Rudroff (ORCID: 0000-0002-6680-8200)
  • Grant DOI 10.55776/P33687
  • Funding program Principal Investigator Projects
  • Status ended
  • Start February 1, 2021
  • End July 31, 2025
  • Funding amount € 399,872
  • Project website

Disciplines

Chemistry (20%); Industrial Biotechnology (80%)

Keywords

    Fluorescence Activated Droplet Sorting, C=C bond cleaving enzymes, High Throughput Assay, Fragrance And Flavour, Oxygenases

Abstract Final report

The aim of this project is to develop a biological (enzyme-assisted) method for splitting carbon / carbon double bonds without the use of the dangerous ozone. The so-called ozonolysis is a widely used method for the production of so-called "carbonyl compounds". Such carbon / carbon double bond containing compounds can be starting materials to make such as flavor compounds like vanillin or fragrances like Lilial. Ozonolyis is mainly used on a laboratory scale. The reason for this is the toxicity of ozone and the danger of the intermediate products, which are not safe: Some of them have already caused industrial reactors to explode. We want to find and investigate a safe alternative with enzymes that can split C = C double bonds at room temperature, in water and by means of oxygen. We use a high-throughput detection method that is specifically designed for the detection of aldehydes (carbonyl compounds) in order to examine different protein sequences for their ability to split C = C double bonds. This detection method is highly sensitive, completely independent of structure, easy to use and extremely specific for aldehydes. With this detection method in combination with a special technique, it is possible to examine up to a million protein sequences in a day. It is thus possible to examine known enzymes for their substrate diversity and new enzymes for their activity in a very short time, as quantitatively as possible. After suitable enzymes have been found, we will use them for the production of potential new active pharmaceutical ingredients or flavorings.

The BioZone project focused on developing an environmentally friendly alternative for producing aldehydes from unsaturated hydrocarbons. These "aldehydes" are important chemical compounds used in the fragrance and flavouring industry. One example is vanilla, which is a must-have in every kitchen, especially during the Christmas season. Another example is cinnamaldehyde, which is also a commonly used spice with a characteristic smell. The chemical production of these compounds is expensive, often involves highly toxic or dangerous reagents, and is not very efficient. That is why we have developed a method in this project that is based on enzymes, known as "biocatalysts". To this end, we produced new enzymes, tested them on a laboratory scale and further developed the best candidates for real industrial application. In addition, we attempted to gain a deeper insight into the function of this biocatalyst. To do this, we crystallised the enzyme and thus elucidated its exact structure. With this knowledge, we further improved the enzyme and finally used it in combination with other biocatalysts to produce vanilla from the renewable raw materials lignin or ferulic acid. We have thus succeeded in establishing a more sustainable method of producing vanilla. The next steps are now to transfer this method to an industrial context.

Research institution(s)
  • Technische Universität Graz - 42%
  • Technische Universität Wien - 58%
Project participants
  • Margit Winkler, Technische Universität Graz , associated research partner
  • Oliver Spadiut, Technische Universität Wien , national collaboration partner

Research Output

  • 8 Publications
  • 4 Datasets & models
  • 3 Disseminations
  • 2 Scientific Awards
  • 1 Fundings
Publications
  • 2023
    Title Enzymatic reactions towards aldehydes: An overview.
    DOI 10.1002/ffj.3739
    Type Journal Article
    Author Dobiašová H
    Journal Flavour and fragrance journal
    Pages 221-242
    Link Publication
  • 2025
    Title Co-enzyme-free, enzymatic synthesis of aldehydes from renewable resources with a new and highly efficient alkene cleaving dioxygenase.
    DOI 10.1039/d5gc01848j
    Type Journal Article
    Author Schiefer A
    Journal Green chemistry : an international journal and green chemistry resource : GC
    Pages 10234-10241
  • 2025
    Title Discovery, Characterisation and Engineering of a Novel Oxygenase as an Enzymatic Alternative to Ozonolysis for Generating Aldehydes from Alkenes
    Type PhD Thesis
    Author Lukas Schober
  • 2025
    Title Structural and Functional Characteristics of Potent Dioxygenase from Moesziomyces aphidis.
    DOI 10.1021/jacsau.5c00456
    Type Journal Article
    Author Plewka J
    Journal JACS Au
    Pages 3014-3020
  • 2024
    Title Harnessing nature's catalysts: Advances in enzymatic alkene cleavage.
    DOI 10.1016/j.jbiotec.2024.09.020
    Type Journal Article
    Author Schiefer A
    Journal Journal of biotechnology
    Pages 189-204
  • 2024
    Title Nature stays natural: two novel chemo-enzymatic one-pot cascades for the synthesis of fragrance and flavor aldehydes.
    DOI 10.1039/d3gc04191c
    Type Journal Article
    Author Giparakis S
    Journal Green chemistry : an international journal and green chemistry resource : GC
    Pages 1338-1344
  • 2024
    Title Unlocking the potential of cyanobacteria: a high-throughput strategy for enhancing biocatalytic performance through genetic optimization
    DOI 10.1016/j.tibtech.2024.07.011
    Type Journal Article
    Author Jodlbauer J
    Journal Trends in Biotechnology
  • 2023
    Title Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity.
    DOI 10.1021/acs.chemrev.2c00304
    Type Journal Article
    Author Hecko S
    Journal Chemical reviews
    Pages 2832-2901
    Link Publication
Datasets & models
  • 2025 Link
    Title pdb 9G88 Crystal Structure of Carotenoid cleavage oxygenase from Moesziomyces aphidis bound to acetate
    DOI 10.2210/pdb9g88/pdb
    Type Database/Collection of data
    Public Access
    Link Link
  • 2025 Link
    Title pdb 9G89 Crystal Structure of Carotenoid cleavage oxygenase from Moesziomyces aphidis bound to vanillin
    DOI 10.2210/pdb9g89/pdb
    Type Database/Collection of data
    Public Access
    Link Link
  • 2025 Link
    Title pdb 9G8F Crystal Structure of Carotenoid cleavage oxygenase from Moesziomyces aphidis bound to orto vanillin
    DOI 10.2210/pdb9g8f/pdb
    Type Database/Collection of data
    Public Access
    Link Link
  • 2025 Link
    Title pdb9G8A Crystal structure of Carotenoid cleavage oxygenase from Moesziomyces aphidis bound to p-hydroxybenzaldehyde
    DOI 10.2210/pdb9g8a/pdb
    Type Database/Collection of data
    Public Access
    Link Link
Disseminations
  • 2025 Link
    Title European Researchers Night
    Type Participation in an open day or visit at my research institution
    Link Link
  • 2024
    Title Lange Nacht der Forschung 2024
    Type Participation in an open day or visit at my research institution
  • 2023
    Title European Researchers Night
    Type Participation in an open day or visit at my research institution
Scientific Awards
  • 2025
    Title Lecture at Gordon Research Conference Biomass to Biobased Chemicals and Materials
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
  • 2024
    Title Keynot at 34th Annual meeting of the Catalysis Society of South Africa (CATSA)
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
Fundings
  • 2026
    Title machinE LEarning for inteGrated multi-parAmetric eNzyme and bioproCess dEsign
    Type Research grant (including intramural programme)
    Start of Funding 2026
    Funder Technical University of Denmark

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