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Emerging Infectious Lung Disease Monitor

Emerging Infectious Lung Disease Monitor

Georg Langs (ORCID: 0000-0002-5536-6873)
  • Grant DOI 10.55776/P35189
  • Funding program Principal Investigator Projects
  • Status ongoing
  • Start October 1, 2021
  • End September 30, 2026
  • Funding amount € 391,671
  • Project website

Disciplines

Computer Sciences (60%); Medical-Theoretical Sciences, Pharmacy (40%)

Keywords

    Machine Learning, Medical Imaging, Lung Disease, Computed Tomography

Abstract

The world-wide spread COVID-19 resulted in a global health care crisis. It made clear that we need the capability to detect an epidemic or pandemic disease early, that we need to be able to diagnose it rapidly, and that we require mechanisms to identify the correct treatment for individual patients. Lung imaging had an important role, shifting from an initially diagnostic- to a prognostic tool informing individual care. The project is a close interdisciplinary collaboration between experts in machine learning and radiology. It will develop new methods in the area of machine learning and image analysis to address these challenges. It will investigate and advance methods for the detection of anomalies and create techniques for the identification of newly emerging phenotypes in the patient population. This will be based on imaging data and clinical information of patients, and is challenging since it involves identifying markers that are not yet known. The second main aim is to develop models that can predict the trajectories of individual patients during their disease and recovery to guide optimal individual treatment. Here, the challenge is to learn from the real-world data collected during the early phase of a pandemic, when no treatment guidelines are available, and the observed patient histories are very diverse. The project will be embedded in international collaborations to ensure the validation of the novel methodology.

Research institution(s)
  • Medizinische Universität Wien - 100%
Project participants
  • Helmut Prosch, Medizinische Universität Wien , national collaboration partner
  • Lucian Beer, Medizinische Universität Wien , national collaboration partner
International project participants
  • Ulrike Attenberger, Universitätsklinikum Bonn - Germany
  • Evis Sala, Policlinico Universitario Agostino Gemelli - Italy
  • Carola Bibiane Schönlieb, University of Cambridge

Research Output

  • 257 Citations
  • 23 Publications
Publications
  • 2025
    Title Measuring the effects of motion corruption in fetal fMRI
    DOI 10.1002/hbm.26806
    Type Journal Article
    Author Taymourtash A
    Journal Human Brain Mapping
    Link Publication
  • 2025
    Title Identifying signatures of image phenotypes to track treatment response in liver disease
    DOI 10.1016/j.artmed.2025.103223
    Type Journal Article
    Author Perkonigg M
    Journal Artificial Intelligence in Medicine
    Pages 103223
    Link Publication
  • 2022
    Title Spatio-Temporal Motion Correction and Iterative Reconstruction of In-Utero Fetal fMRI
    DOI 10.1007/978-3-031-16446-0_57
    Type Book Chapter
    Author Taymourtash A
    Publisher Springer Nature
    Pages 603-612
  • 2022
    Title Spatio-temporal motion correction and iterative reconstruction of in-utero fetal fMRI
    DOI 10.48550/arxiv.2209.08272
    Type Preprint
    Author Taymourtash A
  • 2022
    Title Fetal Brain Tissue Annotation and Segmentation Challenge Results
    DOI 10.48550/arxiv.2204.09573
    Type Preprint
    Author Payette K
  • 2024
    Title Artificial intelligence in respiratory pandemics—ready for disease X? A scoping review
    DOI 10.1007/s00330-024-11183-8
    Type Journal Article
    Author Straub J
    Journal European Radiology
    Pages 1583-1593
    Link Publication
  • 2023
    Title Fetal brain tissue annotation and segmentation challenge results
    DOI 10.1016/j.media.2023.102833
    Type Journal Article
    Author Payette K
    Journal Medical Image Analysis
    Pages 102833
    Link Publication
  • 2023
    Title Evolution of cortical geometry and its link to function, behaviour and ecology
    DOI 10.1038/s41467-023-37574-x
    Type Journal Article
    Author Schwartz E
    Journal Nature Communications
    Pages 2252
    Link Publication
  • 2022
    Title Motion Correction and Volumetric Reconstruction for Fetal Functional Magnetic Resonance Imaging Data
    DOI 10.48550/arxiv.2202.05863
    Type Preprint
    Author Sobotka D
  • 2022
    Title Impact of a content-based image retrieval system on the interpretation of chest CTs of patients with diffuse parenchymal lung disease
    DOI 10.1007/s00330-022-08973-3
    Type Journal Article
    Author Röhrich S
    Journal European Radiology
    Pages 360-367
    Link Publication
  • 2022
    Title Motion correction and volumetric reconstruction for fetal functional magnetic resonance imaging data
    DOI 10.1016/j.neuroimage.2022.119213
    Type Journal Article
    Author Sobotka D
    Journal NeuroImage
    Pages 119213
    Link Publication
  • 2024
    Title Contrast Agent Dynamics Determine Radiomics Profiles in Oncologic Imaging
    DOI 10.3390/cancers16081519
    Type Journal Article
    Author Watzenboeck M
    Journal Cancers
    Pages 1519
    Link Publication
  • 2024
    Title Improving Vessel Segmentation with Multi-Task Learning and Auxiliary Data Available Only During Model Training
    DOI 10.1016/j.compmedimag.2024.102369
    Type Journal Article
    Author Sobotka D
    Journal Computerized Medical Imaging and Graphics
    Pages 102369
    Link Publication
  • 2024
    Title Deep learning links localized digital pathology phenotypes with transcriptional subtype and patient outcome in glioblastoma
    DOI 10.1093/gigascience/giae057
    Type Journal Article
    Author Roetzer-Pejrimovsky T
    Journal GigaScience
    Link Publication
  • 2021
    Title Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
    DOI 10.1038/s41467-021-25858-z
    Type Journal Article
    Author Perkonigg M
    Journal Nature Communications
    Pages 5678
    Link Publication
  • 2023
    Title Innovations in Deep Learning to Predict Individual Risk and Treatment Outcome.
    DOI 10.1148/radiol.231116
    Type Journal Article
    Author Langs G
    Journal Radiology
  • 2023
    Title Deep learning for predicting future lesion emergence in high-risk breast MRI screening: a feasibility study
    DOI 10.1186/s41747-023-00343-y
    Type Journal Article
    Author Burger B
    Journal European Radiology Experimental
    Pages 32
    Link Publication
  • 2022
    Title Fetal development of functional thalamocortical and cortico–cortical connectivity
    DOI 10.1093/cercor/bhac446
    Type Journal Article
    Author Taymourtash A
    Journal Cerebral Cortex (New York, NY)
    Pages 5613-5624
    Link Publication
  • 2022
    Title Unsupervised machine learning identifies predictive progression markers of IPF
    DOI 10.1007/s00330-022-09101-x
    Type Journal Article
    Author Pan J
    Journal European Radiology
    Pages 925-935
    Link Publication
  • 2022
    Title Continual Active Learning Using Pseudo-Domains for Limited Labelling Resources and Changing Acquisition Characteristics
    DOI 10.59275/j.melba.2022-4g6b
    Type Journal Article
    Author Perkonigg M
    Journal Machine Learning for Biomedical Imaging
    Pages 1-28
    Link Publication
  • 2021
    Title 4D iterative reconstruction of brain fMRI in the moving fetus
    DOI 10.48550/arxiv.2111.11394
    Type Preprint
    Author Taymourtash A
  • 2021
    Title Continual Active Learning Using Pseudo-Domains for Limited Labelling Resources and Changing Acquisition Characteristics
    DOI 10.48550/arxiv.2111.13069
    Type Preprint
    Author Perkonigg M
  • 2021
    Title Pseudo-domains in imaging data improve prediction of future disease status in multi-center studies
    DOI 10.48550/arxiv.2111.07634
    Type Preprint
    Author Perkonigg M

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