Molecular Bioanalytics: From molecular recognition to membrane transport (MoBA)
Molecular Bioanalytics: From molecular recognition to membrane transport (MoBA)
Disciplines
Biology (100%)
The interdisciplinary graduate research programme involves the Institutes of Biophysics, of Analytical Chemistry, of Applied Physics, of Organic Chemistry, and of Theoretical Physics from the Johannes-Kepler-University Linz (JKU), the Johann Radon Institute for Computational and Applied Mathematics from the Austrian Academy of Sciences, and the Upper Austrian Research. It is designed to span the gap between the processes of molecular recognition and of molecular membrane transport. The first part is complementary to the GENAU-research network at the JKU "Ultra-sensitive proteomics and genomics", whereas the second part is generated by a long tradition of membrane transport research at the JKU. The scientific goal of the graduate programme is to gain insight into the molecular picture (1) of how molecules are recognised on the membrane surface and (2) of how they are conveyed across membrane proteins. The investigations of carriers (sodium-glucose transporter), nuclear pores, as well as water and ion channels (AQPs and TRP-channels) involved in molecular recognition and membrane transport are going to profit from the development of new bioanalytical methods (thin piezo-electrical film transducers, cell- microarrays, molecular imprinted polymers, high-throughput multi-parameter microscopy). Well established analytical techniques with a resolution covering the whole scale from single molecules to molecular ensembles provide a solid basis for the Molecular Bioanalytics (MoBA) programme. The latter is part of the interdisciplinary priority network "BioSystem Analysis" at the JKU and is designed to provide Austrian and international students with excellent opportunities for multi-disciplinary studies at the edge between physics, medicine, biology and chemistry. Its curriculum comprises a series of lectures in Single Molecule Techniques, in Bioanalysis of Molecular Ensembles and in Biomolecular Techniques which is supplemented by practical courses. In addition, the students will have the opportunity to attend rhetoric courses, courses in presentation techniques and knowledge transfer. The guidelines of the programme include participation in the annual "Single Molecules" workshop held in Linz and a yearly meeting (Summer school) between the student and the entire faculty. Funding by the programme enables Ph.D. students (i) to attend national and international conferences and (ii) to spend one semester in a foreign laboratory. Combined with research at the frontiers of life science, the programme will be applicable to many scientific and technological fields related to biophysics, applied physics, bioorganic chemistry, structural and molecular biology, mathematical modelling, and scientific computing giving the Ph.D. student lifelong flexibility for continued professional growth.
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consortium member (01.03.2006 - 31.12.2010)
- Österreichische Akademie der Wissenschaften
- CBL GmbH
- Universität Linz
- Heinz Engl, Universität Wien , associated research partner
- Wolfgang Buchberger, Universität Linz , associated research partner
- Urbaan M. Titulaer, Universität Linz , associated research partner
- Sapar Saparov, Universität Linz , associated research partner
- Peter Pohl, Universität Linz , associated research partner
- Norbert Müller, Universität Linz , associated research partner
- Johannes Heitz, Universität Linz , associated research partner
- Johannes David Pedarnig, Universität Linz , associated research partner
- Christoph Romanin, Universität Linz , associated research partner
- Gerhard J. Schütz, Technische Universität Wien , associated research partner
- Alois Sonnleitner, CBL GmbH , associated research partner
- Peter Hinterdorfer, Universität Linz , associated research partner
- Gottfried Otting, ANU - Australian National University - Australia
- Vaclav Svorcik, University of Chemistry and Technology Prague - Czechia
- Natalia Prevarskaya, Université de Lille - France
- Helmut Grubmüller, Max-Planck-Institut für Biophysikalische Chemie - Germany
- Boris Mizaikoff, Universität Ulm - Germany
- Dietmar Knopp, Technische Universität München - Germany
- Rolf Kinne, Max-Planck-Gesellschaft - Germany
- Klaus Fendler, Max-Planck-Gesellschaft - Germany
- Claus Hultschig, Max-Planck-Gesellschaft - Germany
- Walter Rosenthal, Helmholtz-Gemeinschaft Deutscher Forschungszentren - Germany
- Michael Schaefer, Freie Universität Berlin - Germany
- Klaus Albert, Eberhard-Karls-Universität Tübingen - Germany
- Laszlo Vigh, University of Szeged - Hungary
- Ziv Reich, Weizmann Institute of Science - Israel
- Vincenzo Capasso, University of Milan - Italy
- Ivano Bertini, Università degli Studi di Firenze - Italy
- Matthias A. Hediger, University of Bern - Switzerland
- Mark Zeidel, University of Pittsburgh - USA
- John Cherian Mathai, University of Pittsburgh - USA
- Stanley Osher, University of California at Los Angeles - USA
- Robert S. Eisenberg, Rush University Medical Center - USA
- Peter Agre, Duke Medical Center - USA
- Rüdiger H. Ettrich, Larkin University - USA
- Evan Evans, Boston University - USA
- Nikolai M. Soldatov, National Institutes of Health - USA
- Philip M. Williams, Nottingham University
- Alexander M. Seifalian, University College London
Research Output
- 1307 Citations
- 18 Publications
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2016
Title New avenues for matter-wave-enhanced spectroscopy DOI 10.1007/s00340-016-6573-y Type Journal Article Author Rodewald J Journal Applied Physics B Pages 3 Link Publication -
2011
Title Monitoring Single-channel Water Permeability in Polarized Cells* DOI 10.1074/jbc.m111.291864 Type Journal Article Author Erokhova L Journal Journal of Biological Chemistry Pages 39926-39932 Link Publication -
2007
Title The first ankyrin-like repeat is the minimum indispensable key structure for functional assembly of homo- and heteromeric TRPC4/TRPC5 channels DOI 10.1016/j.ceca.2007.05.015 Type Journal Article Author Schindl R Journal Cell Calcium Pages 260-269 -
2006
Title Dynamic but not constitutive association of calmodulin with rat TRPV6 channels enables fine tuning of Ca2+-dependent inactivation DOI 10.1113/jphysiol.2006.118661 Type Journal Article Author Derler I Journal The Journal of Physiology Pages 31-44 Link Publication -
2006
Title Fast and Selective Ammonia Transport by Aquaporin-8* DOI 10.1074/jbc.m609343200 Type Journal Article Author Saparov S Journal Journal of Biological Chemistry Pages 5296-5301 Link Publication -
2010
Title Resting State Orai1 Diffuses as Homotetramer in the Plasma Membrane of Live Mammalian Cells* DOI 10.1074/jbc.m110.177881 Type Journal Article Author Madl J Journal Journal of Biological Chemistry Pages 41135-41142 Link Publication -
2009
Title Recent progress on STIM1 domains controlling Orai activation DOI 10.1016/j.ceca.2009.08.003 Type Journal Article Author Schindl R Journal Cell Calcium Pages 227-232 -
2009
Title No facilitator required for membrane transport of hydrogen sulfide DOI 10.1073/pnas.0902952106 Type Journal Article Author Mathai J Journal Proceedings of the National Academy of Sciences Pages 16633-16638 Link Publication -
2009
Title 110 Years of the Meyer–Overton Rule: Predicting Membrane Permeability of Gases and Other Small Compounds DOI 10.1002/cphc.200900270 Type Journal Article Author Missner A Journal ChemPhysChem Pages 1405-1414 Link Publication -
2009
Title Mechanistic view on domains mediating STIM1–Orai coupling DOI 10.1111/j.1600-065x.2009.00815.x Type Journal Article Author Fahrner M Journal Immunological Reviews Pages 99-112 -
2009
Title Stable, Non-Destructive Immobilization of Native Nuclear Membranes to Micro-Structured PDMS for Single-Molecule Force Spectroscopy DOI 10.1002/cphc.200900219 Type Journal Article Author Rangl M Journal ChemPhysChem Pages 1553-1558 Link Publication -
2009
Title Plasticity in Ca2+ selectivity of Orai1/Orai3 heteromeric channel DOI 10.1073/pnas.0907714106 Type Journal Article Author Schindl R Journal Proceedings of the National Academy of Sciences Pages 19623-19628 Link Publication -
2008
Title Cholesterol's decoupling effect on membrane partitioning and permeability revisited: Is there anything beyond Fick's law of diffusion? DOI 10.1016/j.bbamem.2008.05.001 Type Journal Article Author Missner A Journal Biochimica et Biophysica Acta (BBA) - Biomembranes Pages 2154-2156 Link Publication -
2018
Title New Avenues for Matter-Wave-Enhanced Spectroscopy DOI 10.1007/978-3-319-64346-5_2 Type Book Chapter Author Rodewald J Publisher Springer Nature Pages 21-34 -
2012
Title Structure, Regulation and Biophysics of ICRAC, STIM/Orai1 DOI 10.1007/978-94-007-2888-2_16 Type Book Chapter Author Derler I Publisher Springer Nature Pages 383-410 -
2012
Title Electrostatically Induced Recruitment of Membrane Peptides into Clusters Requires Ligand Binding at Both Interfaces DOI 10.1371/journal.pone.0052839 Type Journal Article Author Antonenko Y Journal PLoS ONE Link Publication -
2013
Title Single-Molecule Analysis of the Recognition Forces Underlying Nucleo-Cytoplasmic Transport DOI 10.1002/ange.201305359 Type Journal Article Author Rangl M Journal Angewandte Chemie Pages 10546-10549 Link Publication -
2013
Title Long and Short Lipid Molecules Experience the Same Interleaflet Drag in Lipid Bilayers DOI 10.1103/physrevlett.110.268101 Type Journal Article Author Horner A Journal Physical Review Letters Pages 268101 Link Publication