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Chromosome segregation during human cell division

Chromosome segregation during human cell division

Jan-Michael Peters (ORCID: 0000-0003-2820-3195)
  • Grant DOI 10.55776/Z196
  • Funding program FWF Wittgenstein Award
  • Status ended
  • Start March 1, 2012
  • End December 31, 2017
  • Funding amount € 1,500,000

Disciplines

Biology (60%); Medical-Theoretical Sciences, Pharmacy (40%)

Keywords

    Cell cycle, Protein kinases, Chromosomes, Sister chromatid cohesion, Mitosis, Ubiquitin-dependent proteolysis

Abstract Final report

"[A]ll life on Earth shares the same basic DNA structure." This statement by Francis Crick, who won the Nobel Prize for co-discovering the structure of DNA, highlights the fundamental role genes play in our lives. The genes we pass on to our children determine their identity just as our own genes ensure that we remain individuals with an unmistakable appearance and traits throughout our lives. These apparently self-evident fundamental characteristics of life are rooted in the fact that our genome, that is, the entirety of our hereditary information, is passed on to daughter cells each time a cell divides. In this way, every cell in the body receives a near-identical copy of our genome, and when an ovum is fertilized by a sperm cell, a new genome - a set of "blueprints" for a new individual - is created. For a long time now, we have known that those blueprints are stored in the form of DNA on a total of 46 chromosomes. In the cell division process, these chromosomes are copied by way of DNA replication and then passed on to the daughter cells as they form. But how does this process ensure that each daughter cell contains a full set of chromosomes and not an incorrect number or combination of them? Such a state can often be observed in tumour cells, and if a chromosome is distributed incorrectly in the formation of human ova, it may lead to conditions such as Down Syndrome. Jan-Michael Peters` work has made a major contribution to answering this significant question in biomedicine. Peters and his team have shed light on the regulation and functioning of various protein molecules which are essential for the correct segregation of chromosomes in human cell division. Like the components of tiny devices, most of these proteins act as parts of "molecular machines." One of these machines, the cohesin complex, links the two DNA molecules (also known as sister chromatids) found in each chromosome after replication. The resulting bond between sister chromatids then plays a key role in ensuring the correct segregation of chromosomes. The process of chromosome segregation itself is also controlled by complicated molecular machines - and Peters and his team have discovered how they work, too. These protein complexes, known to experts as APC and separase, perform the important task of removing cohesin complexes from chromosomes. In order to ensure the correct distribution of chromosomes, however, this step cannot be initiated until all 46 chromosomes have been connected to the two poles of the dividing parent cell. If the cohesin complexes are removed from chromosomes too early, the sister chromatids may be distributed incorrectly, which can have catastrophic results for the daughter cells (and for the person in question). Therefore, Jan-Michael Peters` work has not only enriched our knowledge of the mechanisms involved in genome inheritance, but also helped us understand the origins of conditions arising from incorrect chromosome distribution.

Genomes are large compared to the cells they are contained in, corresponding to two meters of DNA which are contained in the 46 chromosomes of human cells. At the various stages of the lifetime of a cell, different genes contained in this large genome have to become active. The genome also has to be duplicated and passed on to daughter cells during cell division, and defects in the genome have to be repaired. For these processes it is crucial that the genome is folded correctly. During this Wittgenstein project, we discovered that a key molecule mediating this genome organization is cohesin, a large ring--shaped protein complex initially discovered for its essential role in chromosome segregation. Our work indicates that in addition to contributing to chromosome segregation in dividing cells, cohesin has a universal role in all cells in forming DNA loops. Several observations imply that cohesin forms these by a mysterious DNA pumping mechanism. This loop extrusion mechanism enables cohesin to connect distant genomic regions which are specified by a DNA binding protein, called CTCF. The size and lifetime of these loops are controlled by yet another protein, WAPL that can release cohesin from DNA and thereby destroy loops. Our work indicates that the ability of cohesin, CTCF and WAPL to form and dissolve DNA loops determines how the genome is folded in chromosomes and that these processes contribute to gene regulation. We further suspect that defects in this process contribute to the development of tumor cells. This hypothesis could explain why cohesin subunits are among the most frequently mutated genes in human cancers.

Research institution(s)
  • Institut für Molekulare Pathologie - IMP - 100%

Research Output

  • 4132 Citations
  • 25 Publications
Publications
  • 2018
    Title Chapter 12 Analysis of chromosomes from mouse oocytes and mammalian cultured cells by light microscopy
    DOI 10.1016/bs.mcb.2018.03.015
    Type Book Chapter
    Author Silva M
    Publisher Elsevier
    Pages 287-305
  • 2017
    Title Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins
    DOI 10.15252/embj.201798004
    Type Journal Article
    Author Wutz G
    Journal The EMBO Journal
    Pages 3573-3599
    Link Publication
  • 2017
    Title A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture
    DOI 10.15252/embj.201798083
    Type Journal Article
    Author Gassler J
    Journal The EMBO Journal
    Pages 3600-3618
    Link Publication
  • 2017
    Title Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl
    DOI 10.1038/nature22063
    Type Journal Article
    Author Busslinger G
    Journal Nature
    Pages 503-507
    Link Publication
  • 2017
    Title BubR1 Promotes Bub3-Dependent APC/C Inhibition during Spindle Assembly Checkpoint Signaling
    DOI 10.1016/j.cub.2017.08.033
    Type Journal Article
    Author Overlack K
    Journal Current Biology
    Link Publication
  • 2017
    Title Synthetic lethality between the cohesin subunits STAG1 and STAG2 in diverse cancer contexts
    DOI 10.7554/elife.26980
    Type Journal Article
    Author Van Der Lelij P
    Journal eLife
    Link Publication
  • 2016
    Title Measuring APC/C-Dependent Ubiquitylation In Vitro
    DOI 10.1007/978-1-4939-2957-3_18
    Type Book Chapter
    Author Jarvis M
    Publisher Springer Nature
    Pages 287-303
    Link Publication
  • 2016
    Title Topology and structure of an engineered human cohesin complex bound to Pds5B
    DOI 10.1038/ncomms12523
    Type Journal Article
    Author Hons M
    Journal Nature Communications
    Pages 12523
    Link Publication
  • 2016
    Title Intact Cohesion, Anaphase, and Chromosome Segregation in Human Cells Harboring Tumor-Derived Mutations in STAG2
    DOI 10.1371/journal.pgen.1005865
    Type Journal Article
    Author Kim J
    Journal PLOS Genetics
    Link Publication
  • 2016
    Title Cryo-EM of Mitotic Checkpoint Complex-Bound APC/C Reveals Reciprocal and Conformational Regulation of Ubiquitin Ligation
    DOI 10.1016/j.molcel.2016.07.003
    Type Journal Article
    Author Yamaguchi M
    Journal Molecular Cell
    Pages 593-607
    Link Publication
  • 2016
    Title Mechanism of APC/CCDC20 activation by mitotic phosphorylation
    DOI 10.1073/pnas.1604929113
    Type Journal Article
    Author Qiao R
    Journal Proceedings of the National Academy of Sciences
    Link Publication
  • 2016
    Title Rapid movement and transcriptional re-localization of human cohesin on DNA
    DOI 10.15252/embj.201695402
    Type Journal Article
    Author Davidson I
    Journal The EMBO Journal
    Pages 2671-2685
    Link Publication
  • 2016
    Title Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C
    DOI 10.1016/j.cell.2016.05.037
    Type Journal Article
    Author Brown N
    Journal Cell
    Pages 1440-1453
    Link Publication
  • 2016
    Title biGBac enables rapid gene assembly for the expression of large multisubunit protein complexes
    DOI 10.1073/pnas.1604935113
    Type Journal Article
    Author Weissmann F
    Journal Proceedings of the National Academy of Sciences
    Link Publication
  • 2016
    Title Sororin actively maintains sister chromatid cohesion
    DOI 10.15252/embj.201592532
    Type Journal Article
    Author Ladurner R
    Journal The EMBO Journal
    Pages 635-653
    Link Publication
  • 2013
    Title Wapl is an essential regulator of chromatin structure and chromosome segregation
    DOI 10.1038/nature12471
    Type Journal Article
    Author Tedeschi A
    Journal Nature
    Pages 564-568
    Link Publication
  • 2013
    Title Aurora B and Cdk1 mediate Wapl activation and release of acetylated cohesin from chromosomes by phosphorylating Sororin
    DOI 10.1073/pnas.1305020110
    Type Journal Article
    Author Nishiyama T
    Journal Proceedings of the National Academy of Sciences
    Pages 13404-13409
    Link Publication
  • 2012
    Title APC15 mediates CDC20 autoubiquitylation by APC/CMCC and disassembly of the mitotic checkpoint complex
    DOI 10.1038/nsmb.2412
    Type Journal Article
    Author Uzunova K
    Journal Nature Structural & Molecular Biology
    Pages 1116-1123
    Link Publication
  • 2014
    Title Cohesin’s ATPase Activity Couples Cohesin Loading onto DNA with Smc3 Acetylation
    DOI 10.1016/j.cub.2014.08.011
    Type Journal Article
    Author Ladurner R
    Journal Current Biology
    Pages 2228-2237
    Link Publication
  • 2014
    Title Structure of an APC3–APC16 Complex: Insights into Assembly of the Anaphase-Promoting Complex/Cyclosome
    DOI 10.1016/j.jmb.2014.11.020
    Type Journal Article
    Author Yamaguchi M
    Journal Journal of Molecular Biology
    Pages 1748-1764
    Link Publication
  • 2014
    Title SNW1 enables sister chromatid cohesion by mediating the splicing of sororin and APC2 pre-mRNAs
    DOI 10.15252/embj.201488202
    Type Journal Article
    Author Van Der Lelij P
    Journal The EMBO Journal
    Pages 2643-2658
    Link Publication
  • 2014
    Title Characterization of a DNA exit gate in the human cohesin ring
    DOI 10.1126/science.1256904
    Type Journal Article
    Author Huis In 'T Veld P
    Journal Science
    Pages 968-972
  • 2014
    Title Mechanism of Polyubiquitination by Human Anaphase-Promoting Complex: RING Repurposing for Ubiquitin Chain Assembly
    DOI 10.1016/j.molcel.2014.09.009
    Type Journal Article
    Author Brown N
    Journal Molecular Cell
    Pages 246-260
    Link Publication
  • 2015
    Title ProteoPlex: stability optimization of macromolecular complexes by sparse-matrix screening of chemical space
    DOI 10.1038/nmeth.3493
    Type Journal Article
    Author Chari A
    Journal Nature Methods
    Pages 859-865
    Link Publication
  • 2015
    Title RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex
    DOI 10.1073/pnas.1504161112
    Type Journal Article
    Author Brown N
    Journal Proceedings of the National Academy of Sciences
    Pages 5272-5279
    Link Publication

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