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Excited states and dynamics of functional Re(I) complexes embedded in metalloproteins

Excited states and dynamics of functional Re(I) complexes embedded in metalloproteins

Leticia Gonzalez (ORCID: 0000-0001-5112-794X)
  • Grant DOI 10.55776/I2883
  • Funding program Principal Investigator Projects International
  • Status ended
  • Start March 1, 2016
  • End August 31, 2019
  • Funding amount € 209,506
  • Project website

Bilaterale Ausschreibung: Frankreich

Disciplines

Chemistry (100%)

Keywords

    Ab Initio Quantum Chemisty, Ab Initio Molecular Dynamics, Quantum Dynamics, Molecular Mechanics, Metalloproteins, Transition Metal Complexes

Abstract Final report

In this project the excited states and the photoinduced dynamics of Rhenium(I) complexes embedded in metalloproteins will be investigated theoretically. Depending on the biological environment and depending on the ligands which functionalize the Re(I) center, these metal complexes can exhibit different functionalities, i.e. they can isomerize, trigger electron transfer or simply emit light. Ultrafast laser experiments have been performed on such systems; however, a mechanistic description of the photoinduced processes is still lacking. This project, therefore, is aimed at discovering and rationalizing the effects of the environment on the photochemistry and photophysics of this family of complexes. Such understanding is fundamental to advance the design of photosynthetic devices, as well as many other systems with applications for material science and molecular biology. To this aim, novel theoretical tools and multi-scale computational strategies will be developed through the combination of three groups with complementary expertise: (1) the calculation of electronically excited states (Strasbourg), (2) the simulation of dynamical processes with quantum (Strasbourg) and semi-classical (Vienna) methods, and (3) the description of biological environments (Nancy). While obtaining specific understanding for molecular systems with experimental interest, the planned consortium will deliver unique methodologies general applicable in the field of photonics. The planned objectives cannot be achieved by a single team. Instead, this consortium is designed to gather complementary know-how in different competences and will allow for synergetic advances, especially in the field of method development.

The aim of this project was to model and simulate light-responsive transition metal complexes in complex bio-environments, such as proteins. In particular, the focus of research was to calculate excited states and the photoinduced dynamics of Re (I) complexes, which experimentally are employed embedded in metallo-labeled mutants of a blue copper protein. The Re (I)-protein system is fascinating because depending on the surrounding ligands and on the environment, specific functions, such as electron transfer triggering, luminescent probing, or isomerization, can in principle be achieved. Given the intricacies of the system, in close collaboration with the partner research groups in Strasbourg and Nancy, we developed new computational approaches that allowed us to investigate the system with increasing degrees of complexity in an efficient and accurate manner. Synergies were exploited between the three groups, which used, developed, extended, and combined complementary techniques involving molecular mechanics from the group in Nancy, quantum dynamics expertise from the group in Strasbourg, and trajectory surface hopping dynamics from our group in Vienna. In this fashion, it was possible to simulate for the first time the excited state dynamics of a [Re(CO)3(Phen)(Im)]+ complex in aqueous solution, as well as in the presence of an amino acid embedded in the blue copper protein, and analyze its spin-dynamics and the charge and energy transfer, respectively. Most of the tools developed are general and can be used for any system in the presence of an environment, which will open new avenues of research. Very importantly, all the developed methods are implemented in openly distributed software, such as our dynamics code SHARC, which now is able to simulate dynamics of transition metal complexes in complex environments.

Research institution(s)
  • Universität Wien - 100%
International project participants
  • Antonio Monari, UMR 7062 : CNRS, Université Paris 7 Denis-Diderot, ÉPHÉ Ve section - France
  • Chantal Daniel, Université de Strasbourg - France

Research Output

  • 1959 Citations
  • 23 Publications
  • 8 Scientific Awards
  • 2 Fundings
Publications
  • 2019
    Title Strong Influence of Decoherence Corrections and Momentum Rescaling in Surface Hopping Dynamics of Transition Metal Complexes.
    DOI 10.1021/acs.jctc.9b00525
    Type Journal Article
    Author Plasser F
    Journal Journal of chemical theory and computation
    Pages 5031-5045
    Link Publication
  • 2019
    Title Unconventional two-step spin relaxation dynamics of [Re(CO) 3 (im)(phen)] + in aqueous solution
    DOI 10.1039/c9sc03671g
    Type Journal Article
    Author Mai S
    Journal Chemical Science
    Pages 10405-10411
    Link Publication
  • 2019
    Title OpenMolcas: From Source Code to Insight.
    DOI 10.1021/acs.jctc.9b00532
    Type Journal Article
    Author Fdez Galván I
    Journal Journal of chemical theory and computation
    Pages 5925-5964
    Link Publication
  • 2019
    Title Machine learning enables long time scale molecular photodynamics simulations
    DOI 10.1039/c9sc01742a
    Type Journal Article
    Author Westermayr J
    Journal Chemical Science
    Pages 8100-8107
    Link Publication
  • 2019
    Title Identification of Important Normal Modes in Nonadiabatic Dynamics Simulations by Coherence, Correlation, and Frequency Analyses
    DOI 10.26434/chemrxiv.9913046.v1
    Type Preprint
    Author Mai S
    Link Publication
  • 2019
    Title Strong Influence of Decoherence Corrections and Momentum Rescaling in Surface Hopping Dynamics of Transition Metal Complexes
    DOI 10.26434/chemrxiv.8201621
    Type Preprint
    Author Plasser F
    Link Publication
  • 2019
    Title Strong Influence of Decoherence Corrections and Momentum Rescaling in Surface Hopping Dynamics of Transition Metal Complexes
    DOI 10.26434/chemrxiv.8201621.v1
    Type Preprint
    Author Plasser F
    Link Publication
  • 2019
    Title Identification of important normal modes in nonadiabatic dynamics simulations by coherence, correlation, and frequency analyses
    DOI 10.1063/1.5129335
    Type Journal Article
    Author Mai S
    Journal The Journal of Chemical Physics
    Pages 244115
    Link Publication
  • 2017
    Title Quantitative wave function analysis for excited states of transition metal complexes
    DOI 10.48550/arxiv.1711.10707
    Type Preprint
    Author Mai S
  • 2018
    Title CHAPTER 10 General Trajectory Surface Hopping Method for Ultrafast Nonadiabatic Dynamics
    DOI 10.1039/9781788012669-00348
    Type Book Chapter
    Author Mai S
    Publisher Royal Society of Chemistry (RSC)
    Pages 348-385
    Link Publication
  • 2018
    Title Intersystem Crossing as a Key Component of the Nonadiabatic Relaxation Dynamics of Bithiophene and Terthiophene
    DOI 10.1021/acs.jctc.8b00492
    Type Journal Article
    Author Schnappinger T
    Journal Journal of Chemical Theory and Computation
    Pages 4530-4540
    Link Publication
  • 2018
    Title Machine learning enables long time scale molecular photodynamics simulations
    DOI 10.48550/arxiv.1811.09112
    Type Preprint
    Author Westermayr J
  • 2018
    Title Highly efficient surface hopping dynamics using a linear vibronic coupling model
    DOI 10.1039/c8cp05662e
    Type Journal Article
    Author Plasser F
    Journal Physical Chemistry Chemical Physics
    Pages 57-69
    Link Publication
  • 2018
    Title Novel Molecular-Dynamics-Based Protocols for Phase Space Sampling in Complex Systems
    DOI 10.3389/fchem.2018.00495
    Type Journal Article
    Author Mai S
    Journal Frontiers in Chemistry
    Pages 495
    Link Publication
  • 2018
    Title Simulated and Experimental Time-Resolved Photoelectron Spectra of the Intersystem Crossing Dynamics in 2-Thiouracil
    DOI 10.3390/molecules23112836
    Type Journal Article
    Author Mai S
    Journal Molecules
    Pages 2836
    Link Publication
  • 2018
    Title Quantitative wave function analysis for excited states of transition metal complexes
    DOI 10.1016/j.ccr.2018.01.019
    Type Journal Article
    Author Mai S
    Journal Coordination Chemistry Reviews
    Pages 74-97
    Link Publication
  • 2020
    Title Revealing Ultrafast Population Transfer between Nearly Degenerate Electronic States
    DOI 10.1021/acs.jpclett.9b03462
    Type Journal Article
    Author Heim P
    Journal The Journal of Physical Chemistry Letters
    Pages 1443-1449
    Link Publication
  • 2020
    Title Competing ultrafast photoinduced electron transfer and intersystem crossing of [Re(CO)3(Dmp)(His124)(Trp122)]+ in Pseudomonas aeruginosa azurin: a nonadiabatic dynamics study
    DOI 10.1007/s00214-020-2555-6
    Type Journal Article
    Author Mai S
    Journal Theoretical Chemistry Accounts
    Pages 65
    Link Publication
  • 2018
    Title Interstate vibronic coupling constants between electronic excited states for complex molecules
    DOI 10.1063/1.5022760
    Type Journal Article
    Author Fumanal M
    Journal The Journal of Chemical Physics
    Pages 124119
    Link Publication
  • 2018
    Title Nonadiabatic dynamics: The SHARC approach
    DOI 10.1002/wcms.1370
    Type Journal Article
    Author Mai S
    Journal Wiley Interdisciplinary Reviews: Computational Molecular Science
    Link Publication
  • 2018
    Title Interstate Vibronic Coupling Constants Between Electronic Excited States for Complex Molecules
    DOI 10.48550/arxiv.1803.11360
    Type Preprint
    Author Fumanal M
  • 2017
    Title Detailed Wave Function Analysis for Multireference Methods: Implementation in the Molcas Program Package and Applications to Tetracene
    DOI 10.1021/acs.jctc.7b00718
    Type Journal Article
    Author Plasser F
    Journal Journal of Chemical Theory and Computation
    Pages 5343-5353
    Link Publication
  • 2017
    Title Excited-states of a rhenium carbonyl diimine complex: solvation models, spin–orbit coupling, and vibrational sampling effects
    DOI 10.1039/c7cp05126c
    Type Journal Article
    Author Mai S
    Journal Physical Chemistry Chemical Physics
    Pages 27240-27250
    Link Publication
Scientific Awards
  • 2019
    Title Robert Bunsen Lecture Prize
    Type Personally asked as a key note speaker to a conference
    Level of Recognition Continental/International
  • 2019
    Title Elected Member of the Austrian Academy of Sciences
    Type Awarded honorary membership, or a fellowship, of a learned society
    Level of Recognition National (any country)
  • 2019
    Title Prize for Excellent Research from the Spanish Royal Society in Chemistry (RSEQ)
    Type Research prize
    Level of Recognition Continental/International
  • 2018
    Title Gauß-Professorship from Göttingen Academy of Sicences and Humanities
    Type Awarded honorary membership, or a fellowship, of a learned society
    Level of Recognition Continental/International
  • 2018
    Title Doctor Honoris Causa by the University of Lorraine (France)
    Type Honorary Degree
    Level of Recognition Continental/International
  • 2018
    Title Elected Member of the International Academy of Quantum Molecular Sciences (IAQMS)
    Type Awarded honorary membership, or a fellowship, of a learned society
    Level of Recognition Continental/International
  • 2018
    Title ChemPubSoc Europe Fellow (Class 2016/2017)
    Type Awarded honorary membership, or a fellowship, of a learned society
    Level of Recognition Continental/International
  • 2018
    Title Fellow of the European Academy of Sciences
    Type Awarded honorary membership, or a fellowship, of a learned society
    Level of Recognition Continental/International
Fundings
  • 2019
    Title Scientific & Technological Cooperation Austria, France
    Type Research grant (including intramural programme)
    Start of Funding 2019
    Funder Austrian Agency for International Cooperation in Education and Research
  • 2018
    Title Priority Program SPP 2102
    Type Research grant (including intramural programme)
    Start of Funding 2018

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