Interdisciplinary Coupled Physic Imaging
Interdisciplinary Coupled Physic Imaging
Disciplines
Mathematics (50%); Medical-Theoretical Sciences, Pharmacy (50%)
Keywords
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Couple Physics Imaging,
Optical Coherence Tomography,
Mathematical Modeling,
Photoacoustic Imaging
This is a follow up initiative of the outgoing interdisciplinary Austrian excellence program NFN on Photoacoustic Imaging in Biology and Medicine, (http://www.csc.univie.ac.at/pai/), which is ending in March 2014. The new proposal is again interdisciplinary, widens the scope, and focuses on up-to-date research topics in Coupled Physics Imaging (CPI). The proposal involves research groups from Applied Mathematics, Biology and Medical Physics, which have already been successfully collaborating in the NFN. In particular, due to the expert knowledge of our team, we consider now groundbreaking topics in CPI, such as combinations of OCT, Photoacoustics, and Elastography. It is a fact that most experimental realization in CPI rely on very basic mathematical models. Overall, these simplifications of assumptions limit the resolution and imaging quality. In this proposal we show that advanced mathematical modeling can be experimentally realized to improve the image quality, can decrease the acquisition time, leads to new experimental realizations, and even allows for recovery of hidden parameters. As we show in the detailed description of the working modules below, we will discover, because we already have done so, surprising, and sometimes counter-intuitive, facts about resolution and recovery processes.
This interdisciplinary project between the Computational Science Center of the University Vienna and the Center for Medical Physics and Biomedical Engineering of the Medical University of Vienna analyses the possibilities of Optical Coherence Tomography (OCT) and Photoacoustic Tomography (PAT) for investigating microscopic data.The main objective of our research has been on the quantitative analysis and the combined use of these modalities.Already at the beginning of the project we had a multi-modal measurement device available, which performs OCT and PAT measurements in parallel. At the beginning of the project this device was internationally exclusively available in Vienna, which brought us an enormous scientific benefit and stimulus for further theoretical mathematical, transclinical and medical research. In the meantime the measurement device has been made insofar transportable that multi-modal medical investigations can be made with patients (for example at the skin).During the project we developed a number of possibilities for visualization of quantitative physical parameters (such as sound speed or compressibility) of the medium of interest. With a single modality alone these parameters cannot be visualized, and therefore are not available for a medical diagnosis. With the developed quantitative methods multi-modal quantitative Elastography has turned out to be very promising for medical applications. Thereby, based on the analysis of the visualized induced displacements (computed with the optical flow) in the medium to be analyzed, we perform a quantitative analysis of the physical parameters of the medium, such as stiffness, with methods of Computational Inverse Problems. For such a workflow one needs a sequence of complementing modalities and the evaluation of the data requires advanced computational methods of Computer Vision and Computational Inverse Problems. First practical experiments with elastic and visco-elastic test materials (for example agarose and silicon) for quantitative multi-modal Elastography are very promising.
- Wolfgang Drexler, Medizinische Universität Wien , associated research partner
- Otmar Scherzer, Österreichische Akademie der Wissenschaften , associated research partner
- Maitine Bergounioux, Université d´Orléans - France
- Habib Ammari, Eidgenössische Technische Hochschule Zürich - Switzerland
- John C. Schotland, Yale University - USA
- Paul Beard, University College London
Research Output
- 471 Citations
- 50 Publications
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2018
Title Lamé Parameter Estimation from Static Displacement Field Measurements in the Framework of Nonlinear Inverse Problems DOI 10.1137/17m1154461 Type Journal Article Author Hubmer S Journal SIAM Journal on Imaging Sciences Pages 1268-1293 Link Publication -
2018
Title A note on convergence of solutions of total variation regularized linear inverse problems DOI 10.1088/1361-6420/aab92a Type Journal Article Author Iglesias J Journal Inverse Problems Pages 055011 Link Publication -
2018
Title Quantitative photoacoustic imaging in the acoustic regime using SPIM DOI 10.1088/1361-6420/aab584 Type Journal Article Author Beigl A Journal Inverse Problems Pages 054003 Link Publication -
2019
Title Automatic skin lesion area determination of basal cell carcinoma using optical coherence tomography angiography and a skeletonization approach: Preliminary results DOI 10.1002/jbio.201900131 Type Journal Article Author Meiburger K Journal Journal of Biophotonics Link Publication -
2016
Title Inverse problems of combined photoacoustic and optical coherence tomography DOI 10.1002/mma.3915 Type Journal Article Author Elbau P Journal Mathematical Methods in the Applied Sciences Pages 505-522 Link Publication -
2016
Title Comprehensive vascular imaging using optical coherence tomography-based angiography and photoacoustic tomography DOI 10.1117/1.jbo.21.9.096011 Type Journal Article Author Zabihian B Journal Journal of Biomedical Optics Pages 096011-096011 Link Publication -
2016
Title Articulated dual modality photoacoustic and optical coherence tomography probe for preclinical and clinical imaging (Conference Presentation) DOI 10.1117/12.2212577 Type Conference Proceeding Abstract Author Liu M Pages 970817-970817-1 -
2016
Title A direct method for photoacoustic tomography with inhomogeneous sound speed DOI 10.1088/0266-5611/32/4/045005 Type Journal Article Author Belhachmi Z Journal Inverse Problems Pages 045005 Link Publication -
2016
Title Nonequispaced grid sampling in photoacoustics with a nonuniform fast Fourier transform DOI 10.1117/1.jbo.21.1.015005 Type Journal Article Author Schmid J Journal Journal of Biomedical Optics Pages 015005-015005 Link Publication -
2016
Title On the X-ray transform of planar symmetric 2-tensors DOI 10.1016/j.jmaa.2016.04.018 Type Journal Article Author Sadiq K Journal Journal of Mathematical Analysis and Applications Pages 31-49 Link Publication -
2016
Title Phase-stable swept source OCT angiography in human skin using an akinetic source DOI 10.1364/boe.7.003032 Type Journal Article Author Chen Z Journal Biomedical Optics Express Pages 3032-3048 Link Publication -
2015
Title A variational method for quantitative photoacoustic tomography with piecewise constant coefficients DOI 10.48550/arxiv.1509.04982 Type Preprint Author Beretta E -
2017
Title Reconstruction formulas for Photoacoustic Imaging in Attenuating Media DOI 10.48550/arxiv.1705.07466 Type Preprint Author Scherzer O -
2017
Title Quantitative Photoacoustic Imaging in the Acoustic Regime using SPIM DOI 10.48550/arxiv.1706.01818 Type Preprint Author Beigl A -
2017
Title A note on convergence of solutions of total variation regularized linear inverse problems DOI 10.48550/arxiv.1711.06495 Type Preprint Author Iglesias J -
2016
Title Inverse Boundary Value Problem For The Helmholtz Equation: Quantitative Conditional Lipschitz Stability Estimates DOI 10.1137/15m1043856 Type Journal Article Author Beretta E Journal SIAM Journal on Mathematical Analysis Pages 3962-3983 Link Publication -
2016
Title Optimal Convergence Rates Results for Linear Inverse Problems in Hilbert Spaces DOI 10.1080/01630563.2016.1144070 Type Journal Article Author Albani V Journal Numerical Functional Analysis and Optimization Pages 521-540 Link Publication -
2015
Title Non-Equispaced Grid Sampling in Photoacoustics with a Non-Uniform FFT DOI 10.48550/arxiv.1510.01078 Type Preprint Author Schmid J -
2015
Title Tomography, Photoacoustic, and Thermoacoustic DOI 10.1007/978-3-540-70529-1_47 Type Book Chapter Author Kuchment P Publisher Springer Nature Pages 1488-1496 -
2015
Title Inverse boundary value problem for the Helmholtz equation: quantitative conditional Lipschitz stability estimates DOI 10.48550/arxiv.1510.02366 Type Preprint Author Beretta E -
2015
Title Taylor Series Methods DOI 10.1007/978-3-540-70529-1_153 Type Book Chapter Author Barrio R Publisher Springer Nature Pages 1465-1470 -
2017
Title Nonlinear Flows for Displacement Correction and Applications in Tomography DOI 10.1007/978-3-319-58771-4_23 Type Book Chapter Author Dong G Publisher Springer Nature Pages 283-294 -
2017
Title Quantitative reconstructions in multi-modal photoacoustic and optical coherence tomography imaging DOI 10.1088/1361-6420/aa9ae7 Type Journal Article Author Elbau P Journal Inverse Problems Pages 014006 Link Publication -
2017
Title Reconstruction formulas for photoacoustic imaging in attenuating media DOI 10.1088/1361-6420/aa9ade Type Journal Article Author Scherzer O Journal Inverse Problems Pages 015006 Link Publication -
2017
Title Combined multimodal photoacoustic tomography, optical coherence tomography (OCT) and OCT based angiography system for in vivo imaging of multiple skin disorders in human(Conference Presentation) DOI 10.1117/12.2253002 Type Conference Proceeding Abstract Author Liu M -
2017
Title Complete Cutaneous Vasculature Imaging and Its Clinical Translation Using Multimodal Photoacoustic and Optical Coherence Tomography Angiography DOI 10.1364/cleo_at.2017.jth4a.2 Type Conference Proceeding Abstract Author Liu M -
2017
Title The inverse scattering problem for orthotropic media in polarization-sensitive optical coherence tomography DOI 10.1007/s13137-017-0102-y Type Journal Article Author Elbau P Journal GEM - International Journal on Geomathematics Pages 145-165 Link Publication -
2017
Title Non-invasive multimodal optical coherence and photoacoustic tomography for human skin imaging DOI 10.1038/s41598-017-18331-9 Type Journal Article Author Chen Z Journal Scientific Reports Pages 17975 Link Publication -
2017
Title Surface pH changes suggest a role for H+/OH- channels in salinity response of Chara australis DOI 10.1007/s00709-017-1191-z Type Journal Article Author Absolonova M Journal Protoplasma Pages 851-862 Link Publication -
2017
Title Convergence rates for regularization functionals with polyconvex integrands DOI 10.1088/1361-6420/aa7a1e Type Journal Article Author Kirisits C Journal Inverse Problems Pages 085008 Link Publication -
2017
Title Singular values of the attenuated photoacoustic imaging operator DOI 10.1016/j.jde.2017.06.018 Type Journal Article Author Elbau P Journal Journal of Differential Equations Pages 5330-5376 Link Publication -
2017
Title The inverse scattering problem for orthotropic media in Polarization-sensitive Optical Coherence Tomography DOI 10.48550/arxiv.1705.08373 Type Preprint Author Elbau P -
2017
Title Quantitative reconstructions in multi-modal photoacoustic and optical coherence tomography imaging DOI 10.48550/arxiv.1709.00207 Type Preprint Author Elbau P -
2017
Title Lamé Parameter Estimation from Static Displacement Field Measurements in the Framework of Nonlinear Inverse Problems DOI 10.48550/arxiv.1710.10446 Type Preprint Author Hubmer S -
2015
Title A Direct Method for Photoacoustic Tomography with Inhomogeneous Sound Speed DOI 10.48550/arxiv.1507.01741 Type Preprint Author Belhachmi Z -
2015
Title Photoacoustic Tomography With Spatially Varying Compressibility and Density DOI 10.48550/arxiv.1512.07411 Type Preprint Author Belhachmi Z -
2015
Title On the $X$-ray transform of planar symmetric 2-tensors DOI 10.48550/arxiv.1503.04322 Type Preprint Author Sadiq K -
2015
Title Computational Realization of a Non-Equidistant Grid Sampling in Photoacoustics with a Non-Uniform FFT DOI 10.48550/arxiv.1501.02946 Type Preprint Author Schmid J -
2014
Title Texture Generation for Photoacoustic Elastography DOI 10.48550/arxiv.1407.6982 Type Preprint Author Glatz T -
2017
Title The inverse scattering problem for orthotropic media in polarization-sensitive optical coherence tomography. Type Journal Article Author Elbau P -
2015
Title Texture Generation for Photoacoustic Elastography DOI 10.1007/s10851-015-0561-4 Type Journal Article Author Glatz T Journal Journal of Mathematical Imaging and Vision Pages 369-384 -
2015
Title RADAR Imaging - A Mathematical Perspective. Type Journal Article Author Elbau P Journal Schriftenreihe zur Didaktik der Mathematik der Österreichischen Mathematischen Gesellschaft -
2015
Title Texture generation in compressional photoacoustic elastography DOI 10.1117/12.2079672 Type Conference Proceeding Abstract Author Schmid J -
2015
Title Modelling the Effect of Focusing Detectors in Photoacoustic Sectional Imaging DOI 10.1137/120882962 Type Journal Article Author Elbau P Journal SIAM Journal on Imaging Sciences Pages 1-18 -
2016
Title Convergence rates for regularization functionals with polyconvex integrands DOI 10.48550/arxiv.1612.06724 Type Preprint Author Kirisits C -
2016
Title Singular Values of the Attenuated Photoacoustic Imaging Operator DOI 10.48550/arxiv.1611.05807 Type Preprint Author Elbau P -
2016
Title Inverse Problems of Combined Photoacoustic and Optical Coherence Tomography DOI 10.48550/arxiv.1601.03320 Type Preprint Author Elbau P -
2016
Title 6. A variational method for quantitative photoacoustic tomography with piecewise constant coefficients DOI 10.1515/9783110430394-006 Type Book Chapter Author Beretta E Publisher De Gruyter Pages 202-224 Link Publication -
2016
Title Photoacoustic tomography with spatially varying compressibility and density DOI 10.1515/jiip-2015-0113 Type Journal Article Author Belhachmi Z Journal Journal of Inverse and Ill-posed Problems Pages 119-133 Link Publication -
2016
Title Combined multi-modal photoacoustic tomography, optical coherence tomography (OCT) and OCT angiography system with an articulated probe for in vivo human skin structure and vasculature imaging. DOI 10.1364/boe.7.003390 Type Journal Article Author Liu M Journal Biomedical optics express Pages 3390-3402 Link Publication