Structural Studies of the ß-Catenin Destruction Complex
Structural Studies of the ß-Catenin Destruction Complex
Disciplines
Biology (100%)
Keywords
-
NMR Spectroscopy,
Integrated Structural Biology,
Small-angle scattering,
Wnt signalling,
Axin-1,
B-Catenin
The Wnt signaling pathway plays an important role during embryonic development. Tight control of the Wnt signaling pathway is essential and occurs largely through the regulation of free levels of the protein ß-catenin by the ß-catenin destruction complex. Misregulation of the Wnt signaling pathway is a common feature of severe human diseases such as cancers. However, the molecular mechanisms underlying ß-catenin destruction complex formation are largely unknown which is primarily due to the intrinsic flexibility of the involved protein complexes which renders them challenging to study using conventional structural techniques. Here we aim propose to use a combination of cutting-edge solution structural techniques to reveal the molecular mechanisms of ß-catenin trapping and phosphorylation by studying a minimal Axin-1 - GSK3ß - ß-catenin protein complex. This minimal complex contains all parts needed for ß-catenin trapping and phosphorylation. We aim to study structure and function of the Axin-1 - GSK3ß - ß-catenin complex, its (mis)regulation by post-translational modifications (PTMs, i.e. phosphorylation) and disease mutations, and its functional implications in cell-based assays. To overcome the challenges imposed by the intrinsic flexibility of the complex, we will make use of our recent methodological achievements for studying structure and dynamics of proteins and protein complexes, i.e. using a multi- disciplinary structural biology approach in which we combine frontier solution techniques such as Nuclear Magnetic Resonance (NMR) spectroscopy, Small-angle X-ray/neutron scattering (SAXS/SANS), and molecular modeling. Our structural and functional studies of the dynamic Axin-1 - GSK3ß - ß-catenin complex will not only provide biologically highly relevant insight into the allosteric regulation of the ß-catenin destruction complex and disease mechanisms, but also into the key role of disordered proteins in allosteric regulation.
The Wnt signaling pathway plays an important role during embryonic development. Tight control of the Wnt signaling pathway is essential and occurs largely through the regulation of free levels of the protein ß-catenin by the ß-catenin destruction complex. Misregulation of the Wnt signaling pathway is a common feature of severe human diseases such as cancers. However, the molecular mechanisms underlying ß-catenin destruction complex formation are largely unknown which is primarily due to the intrinsic flexibility of the involved protein complexes which renders them challenging to study using conventional structural techniques. Here we aim propose to use a combination of cutting-edge solution structural techniques to reveal the molecular mechanisms of ß-catenin trapping and phosphorylation by studying a minimal Axin-1 - GSK3ß - ß-catenin protein complex. This minimal complex contains all parts needed for ß-catenin trapping and phosphorylation. We aim to study structure and function of the Axin-1 - GSK3ß - ß-catenin complex, its (mis)regulation by post- translational modifications (PTMs, i.e. phosphorylation) and disease mutations, and its functional implications in cell-based assays. To overcome the challenges imposed by the intrinsic flexibility of the complex, we will make use of our recent methodological achievements for studying structure and dynamics of proteins and protein complexes, i.e. using a multi-disciplinary structural biology approach in which we combine frontier solution techniques such as Nuclear Magnetic Resonance (NMR) spectroscopy, Small-angle X- ray/neutron scattering (SAXS/SANS), and molecular modeling. Our structural and functional studies of the dynamic Axin-1 - GSK3ß - ß-catenin complex will not only provide biologically highly relevant insight into the allosteric regulation of the ß-catenin destruction complex and disease mechanisms, but also into the key role of disordered proteins in allosteric regulation.
Research Output
- 4651 Citations
- 150 Publications
- 1 Policies
- 10 Datasets & models
- 3 Disseminations
- 1 Scientific Awards
- 3 Fundings
-
2016
Title PRMT1-mediated methylation of MICU1 determines the UCP2/3 dependency of mitochondrial Ca2+ uptake in immortalized cells DOI 10.1038/ncomms12897 Type Journal Article Author Madreiter-Sokolowski C Journal Nature Communications Pages 12897 Link Publication -
2016
Title Importance of cycle timing for the function of the molecular chaperone Hsp90 DOI 10.1038/nsmb.3305 Type Journal Article Author Zierer B Journal Nature Structural & Molecular Biology Pages 1020-1028 Link Publication -
2016
Title Prediction of Protein Structure Using Surface Accessibility Data DOI 10.1002/ange.201604788 Type Journal Article Author Hartlmüller C Journal Angewandte Chemie Pages 12149-12153 Link Publication -
2016
Title Recognition of the 3' splice site RNA by the U2AF heterodimer involves a dynamic population shift DOI 10.1073/pnas.1605873113 Type Journal Article Author Voith Von Voithenberg L Journal Proceedings of the National Academy of Sciences Link Publication -
2016
Title Crystal and solution structural studies of mouse phospholipid hydroperoxide glutathione peroxidase 4 DOI 10.1107/s2053230x16013686 Type Journal Article Author Janowski R Journal Acta Crystallographica Section F: Structural Biology Communications Pages 743-749 Link Publication -
2016
Title Verbesserung der Dispersion der chemischen Verschiebungen von unstrukturierten Proteinen durch einen kovalent gebundenen Lanthanoidkomplex DOI 10.1002/ange.201607261 Type Journal Article Author Göbl C Journal Angewandte Chemie Pages 15069-15073 Link Publication -
2016
Title Randomised clinical trial: the effects of a multispecies probiotic vs. placebo on innate immune function, bacterial translocation and gut permeability in patients with cirrhosis DOI 10.1111/apt.13788 Type Journal Article Author Horvath A Journal Alimentary Pharmacology & Therapeutics Pages 926-935 Link Publication -
2016
Title Prediction of Protein Structure Using Surface Accessibility Data DOI 10.1002/anie.201604788 Type Journal Article Author Hartlmüller C Journal Angewandte Chemie International Edition Pages 11970-11974 Link Publication -
2016
Title Increasing the Chemical-Shift Dispersion of Unstructured Proteins with a Covalent Lanthanide Shift Reagent DOI 10.1002/anie.201607261 Type Journal Article Author Göbl C Journal Angewandte Chemie International Edition Pages 14847-14851 Link Publication -
2025
Title Structural basis of phosphorylation-independent nuclear import of CIRBP by TNPO3 DOI 10.1038/s41467-025-59802-2 Type Journal Article Author Zhou Q Journal Nature Communications Pages 4456 Link Publication -
2025
Title Expanding the cultivable human archaeome: Methanobrevibacter intestini sp. nov. and strain Methanobrevibacter smithii 'GRAZ-2' from human faeces. DOI 10.1099/ijsem.0.006751 Type Journal Article Author Weinberger V Journal International journal of systematic and evolutionary microbiology -
2025
Title Biodegradable ultrahigh-purity magnesium and its alloy ZX00 promote osteogenesis in the medullary cavity and glycogenolysis in the liver DOI 10.1016/j.actbio.2025.02.007 Type Journal Article Author Okutan B Journal Acta Biomaterialia Pages 599-613 Link Publication -
2024
Title Targeting organ-specific mitochondrial dysfunction to improve biological aging DOI 10.1016/j.pharmthera.2024.108710 Type Journal Article Author Madreiter-Sokolowski C Journal Pharmacology & Therapeutics Pages 108710 Link Publication -
2024
Title Expanding the cultivable human archaeome: Methanobrevibacter intestini sp. nov. and strain Methanobrevibacter smithii “GRAZ-2” from human feces DOI 10.1101/2024.05.15.594450 Type Preprint Author Weinberger V Pages 2024.05.15.594450 Link Publication -
2024
Title Reduced olfactory performance is associated with changed microbial diversity, oralization, and accumulation of dead biomaterial in the nasal olfactory area DOI 10.1128/spectrum.01549-23 Type Journal Article Author Kumpitsch C Journal Microbiology Spectrum Link Publication -
2024
Title Advanced Oxidation Protein Products Are Strongly Associated with the Serum Levels and Lipid Contents of Lipoprotein Subclasses in Healthy Volunteers and Patients with Metabolic Syndrome DOI 10.3390/antiox13030339 Type Journal Article Author Klobucar I Journal Antioxidants Pages 339 Link Publication -
2024
Title Interindividual differences in aronia juice tolerability linked to gut microbiome and metabolome changes—secondary analysis of a randomized placebo-controlled parallel intervention trial DOI 10.1186/s40168-024-01774-4 Type Journal Article Author Lackner S Journal Microbiome Pages 49 Link Publication -
2024
Title Genetically encoded fluorescent sensor to monitor intracellular arginine methylation DOI 10.1016/j.jphotobiol.2024.112867 Type Journal Article Author Zhang F Journal Journal of Photochemistry and Photobiology B: Biology Pages 112867 Link Publication -
2023
Title MetSCORE: A Molecular Metric to Evaluate the Risk of Metabolic Syndrome Based on Serum NMR Metabolomics DOI 10.2139/ssrn.4625798 Type Preprint Author Conde R -
2021
Title ATP regulates RNA-driven cold inducible RNA binding protein phase separation DOI 10.1002/pro.4123 Type Journal Article Author Zhou Q Journal Protein Science Pages 1438-1453 Link Publication -
2021
Title Potassium ions promote hexokinase-II dependent glycolysis DOI 10.1016/j.isci.2021.102346 Type Journal Article Author Bischof H Journal iScience Pages 102346 Link Publication -
2021
Title Dietary spermidine improves cognitive function DOI 10.1016/j.celrep.2021.108985 Type Journal Article Author Schroeder S Journal Cell Reports Pages 108985 Link Publication -
2021
Title Growing Human Hepatocellular Tumors Undergo a Global Metabolic Reprogramming DOI 10.3390/cancers13081980 Type Journal Article Author Zhang F Journal Cancers Pages 1980 Link Publication -
2021
Title Imbalances in the eye lens proteome are linked to cataract formation. DOI 10.1038/s41594-020-00543-9 Type Journal Article Author Lim Nch Journal Nature structural & molecular biology Pages 143-151 -
2024
Title Alteration of the Gut–Lung Axis After Severe COVID-19 Infection and Modulation Through Probiotics: A Randomized, Controlled Pilot Study DOI 10.3390/nu16223840 Type Journal Article Author Horvath A Journal Nutrients Pages 3840 Link Publication -
2024
Title Impaired HDL antioxidant and anti-inflammatory functions are linked to increased mortality in acute heart failure patients DOI 10.1016/j.redox.2024.103341 Type Journal Article Author Pammer A Journal Redox Biology Pages 103341 Link Publication -
2024
Title Sex-Related Differences in the Associations between Adiponectin and Serum Lipoproteins in Healthy Subjects and Patients with Metabolic Syndrome DOI 10.3390/biomedicines12091972 Type Journal Article Author Klobucar I Journal Biomedicines Pages 1972 Link Publication -
2024
Title Effects of dietary interventions and intermittent fasting on HDL function in obese individuals with T2DM: a randomized controlled trial DOI 10.1186/s12933-024-02426-5 Type Journal Article Author Pammer A Journal Cardiovascular Diabetology Pages 339 Link Publication -
2024
Title Sirtuin 3 drives sex-specific responses to age-related changes in mouse embryonic fibroblasts DOI 10.1016/j.mad.2024.111996 Type Journal Article Author Šimunic E Journal Mechanisms of Ageing and Development Pages 111996 -
2024
Title IGF2BP1 phosphorylation in the disordered linkers regulates ribonucleoprotein condensate formation and RNA metabolism DOI 10.1038/s41467-024-53400-4 Type Journal Article Author Hornegger H Journal Nature Communications Pages 9054 Link Publication -
2024
Title MetSCORE: a molecular metric to evaluate the risk of metabolic syndrome based on serum NMR metabolomics DOI 10.1186/s12933-024-02363-3 Type Journal Article Author Gil-Redondo R Journal Cardiovascular Diabetology Pages 272 Link Publication -
2024
Title Skeletal muscle p53-depletion uncovers a mechanism of fuel usage suppression that enables efficient energy conservation DOI 10.1002/jcsm.13529 Type Journal Article Author Lenihan-Geels G Journal Journal of Cachexia, Sarcopenia and Muscle Pages 1772-1784 Link Publication -
2024
Title Metabolic Reprogramming Is an Initial Step in Pancreatic Carcinogenesis That Can Be Targeted to Inhibit Acinar-to-Ductal Metaplasia. DOI 10.1158/0008-5472.can-23-2213 Type Journal Article Author Neuß T Journal Cancer research Pages 2297-2312 -
2024
Title Spermidine is essential for fasting-mediated autophagy and longevity DOI 10.1038/s41556-024-01468-x Type Journal Article Author Hofer S Journal Nature Cell Biology Pages 1571-1584 Link Publication -
2024
Title Probiotic Therapy of Gastrointestinal Symptoms During COVID-19 Infection: A Randomized, Double-Blind, Placebo-Controlled, Remote Study DOI 10.3390/nu16223970 Type Journal Article Author Horvath A Journal Nutrients Pages 3970 Link Publication -
2024
Title PROVIT-CLOCK: A Potential Influence of Probiotics and Vitamin B7 Add-On Treatment and Metabolites on Clock Gene Expression in Major Depression DOI 10.1159/000538781 Type Journal Article Author Kreuzer K Journal Neuropsychobiology Pages 135-151 Link Publication -
2024
Title Serum Levels of Adiponectin Are Strongly Associated with Lipoprotein Subclasses in Healthy Volunteers but Not in Patients with Metabolic Syndrome DOI 10.3390/ijms25095050 Type Journal Article Author Klobucar I Journal International Journal of Molecular Sciences Pages 5050 Link Publication -
2024
Title Millifluidic magnetophoresis-based chip for age-specific fractionation: evaluating the impact of age on metabolomics and gene expression in yeast DOI 10.1039/d4lc00185k Type Journal Article Author Wittmann L Journal Lab on a Chip Pages 2987-2998 Link Publication -
2022
Title The sex-specific metabolic signature of C57BL/6NRj mice during aging DOI 10.1038/s41598-022-25396-8 Type Journal Article Author Bresilla D Journal Scientific Reports Pages 21050 Link Publication -
2022
Title The sex-specific metabolic signature of C57BL/6NRj mice during aging DOI 10.60692/yeryf-hqa71 Type Other Author Doruntina Bresilla Link Publication -
2022
Title The sex-specific metabolic signature of C57BL/6NRj mice during aging DOI 10.60692/9x7pr-z5m82 Type Other Author Doruntina Bresilla Link Publication -
2022
Title The sex-specific metabolic signature of C57BL/6NRj mice during aging DOI 10.3929/ethz-b-000586504 Type Other Author Bresilla Link Publication -
2021
Title Global analysis of protein arginine methylation DOI 10.1016/j.crmeth.2021.100016 Type Journal Article Author Zhang F Journal Cell Reports Methods Pages 100016 Link Publication -
2023
Title Altered gut microbiome, bile acid composition and metabolome in sarcopenia in liver cirrhosis DOI 10.1002/jcsm.13342 Type Journal Article Author Aliwa B Journal Journal of Cachexia, Sarcopenia and Muscle Pages 2676-2691 Link Publication -
2023
Title Loss of lysosomal acid lipase results in mitochondrial dysfunction and fiber switch in skeletal muscles of mice DOI 10.1016/j.molmet.2023.101869 Type Journal Article Author Akhmetshina A Journal Molecular Metabolism Pages 101869 Link Publication -
2023
Title Low Valine Serum Levels Predict Increased 1-Year Mortality in Acute Heart Failure Patients DOI 10.3390/biom13091323 Type Journal Article Author Klobucar I Journal Biomolecules Pages 1323 Link Publication -
2023
Title HDL-Related Parameters and COVID-19 Mortality: The Importance of HDL Function DOI 10.3390/antiox12112009 Type Journal Article Author Stadler J Journal Antioxidants Pages 2009 Link Publication -
2023
Title Disordered regions mediate the interaction of p53 and MRE11 DOI 10.1016/j.bbamcr.2023.119654 Type Journal Article Author Usluer S Journal Biochimica et Biophysica Acta (BBA) - Molecular Cell Research Pages 119654 Link Publication -
2023
Title Targeting epigenetic features in clear cell sarcomas based on patient-derived cell lines DOI 10.1186/s12967-022-03843-4 Type Journal Article Author Karner C Journal Journal of Translational Medicine Pages 54 Link Publication -
2020
Title Metabolic reprogramming of donor T cells enhances graft-versus-leukemia effects in mice and humans DOI 10.1126/scitranslmed.abb8969 Type Journal Article Author Uhl F Journal Science Translational Medicine Link Publication -
2023
Title Clinical NEC prevention practices drive different microbiome profiles and functional responses in the preterm intestine DOI 10.1038/s41467-023-36825-1 Type Journal Article Author Neumann C Journal Nature Communications Pages 1349 Link Publication -
2022
Title Cholesterol Content of Very-Low-Density Lipoproteins Is Associated with 1-Year Mortality in Acute Heart Failure Patients DOI 10.3390/biom12101542 Type Journal Article Author Degoricija V Journal Biomolecules Pages 1542 Link Publication -
2022
Title The LEF-1 high-mobility group box adopts residual structure in its DNA-free form DOI 10.1016/j.jmro.2022.100074 Type Journal Article Author Alderson T Journal Journal of Magnetic Resonance Open Pages 100074 Link Publication -
2022
Title Phosphatidylethanolamine N-Methyltransferase Knockout Modulates Metabolic Changes in Aging Mice DOI 10.3390/biom12091270 Type Journal Article Author Zhou Q Journal Biomolecules Pages 1270 Link Publication -
2022
Title Solvent paramagnetic relaxation enhancement as a versatile method for studying structure and dynamics of biomolecular systems DOI 10.1016/j.pnmrs.2022.09.001 Type Journal Article Author Lenard A Journal Progress in Nuclear Magnetic Resonance Spectroscopy Pages 113-139 Link Publication -
2022
Title Patterns of Peripheral Blood B-Cell Subtypes Are Associated With Treatment Response in Patients Treated With Immune Checkpoint Inhibitors: A Prospective Longitudinal Pan-Cancer Study DOI 10.3389/fimmu.2022.840207 Type Journal Article Author Barth D Journal Frontiers in Immunology Pages 840207 Link Publication -
2021
Title Dietary spermidine improves cognitive function DOI 10.17169/refubium-31292 Type Other Author Hofer S Link Publication -
2021
Title Additional file 4 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680136 Type Other Author Fischmeister F Link Publication -
2021
Title Additional file 11 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680127 Type Other Author Fischmeister F Link Publication -
2021
Title Additional file 11 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680127.v1 Type Other Author Fischmeister F Link Publication -
2021
Title Additional file 2 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680130.v1 Type Other Author Fischmeister F Link Publication -
2021
Title Additional file 2 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680130 Type Other Author Fischmeister F Link Publication -
2021
Title Additional file 4 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680136.v1 Type Other Author Fischmeister F Link Publication -
2021
Title XIAP restrains TNF-driven intestinal inflammation and dysbiosis by promoting innate immune responses of Paneth and dendritic cells DOI 10.1126/sciimmunol.abf7235 Type Journal Article Author Wahida A Journal Science Immunology -
2021
Title p53 Transactivation Domain Mediates Binding and Phase Separation with Poly-PR/GR DOI 10.3390/ijms222111431 Type Journal Article Author Usluer S Journal International Journal of Molecular Sciences Pages 11431 Link Publication -
2021
Title Intracellular drug binding affinities by NMR DOI 10.1107/s2059798321010135 Type Journal Article Author Madl T Journal Acta Crystallographica Section D Pages 1216-1217 Link Publication -
2021
Title Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.1186/s40168-021-01130-w Type Journal Article Author Kumpitsch C Journal Microbiome Pages 193 Link Publication -
2021
Title Phosphorylation Regulates CIRBP Arginine Methylation, Transportin-1 Binding and Liquid-Liquid Phase Separation DOI 10.3389/fmolb.2021.689687 Type Journal Article Author Lenard A Journal Frontiers in Molecular Biosciences Pages 689687 Link Publication -
2021
Title A General Small-Angle X-ray Scattering-Based Screening Protocol for Studying Physical Stability of Protein Formulations DOI 10.3390/pharmaceutics14010069 Type Journal Article Author Zhang F Journal Pharmaceutics Pages 69 Link Publication -
2021
Title Metabolomic Profiles of Mouse Tissues Reveal an Interplay between Aging and Energy Metabolism DOI 10.3390/metabo12010017 Type Journal Article Author Zhou Q Journal Metabolites Pages 17 Link Publication -
2021
Title Metabolomic Profiles of Mice Tissues Reveals an Interplay Between Aging and Energy Metabolism DOI 10.20944/preprints202112.0120.v1 Type Preprint Author Zhou Q Link Publication -
2020
Title Tissue-Specific Landscape of Metabolic Dysregulation during Ageing DOI 10.20944/preprints202012.0174.v1 Type Preprint Author Zhang F Link Publication -
2020
Title Nuclear Import Receptors Directly Bind to Arginine-Rich Dipeptide Repeat Proteins and Suppress Their Pathological Interactions DOI 10.1016/j.celrep.2020.108538 Type Journal Article Author Hutten S Journal Cell Reports Pages 108538 Link Publication -
2020
Title ß-catenin regulates FOXP2 transcriptional activity via multiple binding sites DOI 10.1111/febs.15656 Type Journal Article Author Richter G Journal The FEBS Journal Pages 3261-3284 Link Publication -
2018
Title Oxidative stress-induced structural changes in the microtubule-associated flavoenzyme Irc15p from Saccharomyces cerevisiae DOI 10.1002/pro.3517 Type Journal Article Author Koch K Journal Protein Science Pages 176-190 Link Publication -
2018
Title NMR spectroscopy enables simultaneous quantification of carbohydrates for diagnosis of intestinal and gastric permeability DOI 10.1038/s41598-018-33104-8 Type Journal Article Author Stryeck S Journal Scientific Reports Pages 14650 Link Publication -
2019
Title Human Milk Oligosaccharides modulate the risk for preterm birth in a microbiome dependent and independent manner DOI 10.1101/683714 Type Preprint Author Pausan M Pages 683714 Link Publication -
2019
Title Serum Concentrations of Citrate, Tyrosine, 2- and 3- Hydroxybutyrate are Associated with Increased 3-Month Mortality in Acute Heart Failure Patients DOI 10.1038/s41598-019-42937-w Type Journal Article Author Stryeck S Journal Scientific Reports Pages 6743 Link Publication -
2019
Title Increased Aggregation Tendency of Alpha-Synuclein in a Fully Disordered Protein Complex DOI 10.1016/j.jmb.2019.04.031 Type Journal Article Author Merle D Journal Journal of Molecular Biology Pages 2581-2598 -
2019
Title Endothelial lipase increases antioxidative capacity of high-density lipoprotein DOI 10.1016/j.bbalip.2019.06.011 Type Journal Article Author Schilcher I Journal Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids Pages 1363-1374 Link Publication -
2019
Title Acetyl-CoA carboxylase 1–dependent lipogenesis promotes autophagy downstream of AMPK DOI 10.1074/jbc.ra118.007020 Type Journal Article Author Gross A Journal Journal of Biological Chemistry Pages 12020-12039 Link Publication -
2023
Title “IGF2BP1 phosphorylation regulates ribonucleoprotein condensate formation by impairing low-affinity protein and RNA interactions” DOI 10.1101/2023.12.05.570121 Type Preprint Author Hornegger H Pages 2023.12.05.570121 Link Publication -
2023
Title Associations between Endothelial Lipase, High-Density Lipoprotein, and Endothelial Function Differ in Healthy Volunteers and Metabolic Syndrome Patients DOI 10.3390/ijms24032073 Type Journal Article Author Klobucar I Journal International Journal of Molecular Sciences Pages 2073 Link Publication -
2023
Title Targeted perturbation of signaling-driven condensates DOI 10.1016/j.molcel.2023.10.023 Type Journal Article Author Gui T Journal Molecular Cell Link Publication -
2023
Title Fecal microbiota transplantation from individual with bipolar disorder and healthy control elicits distinct behaviors and metabolite profiles in mice DOI 10.1101/2023.11.16.566698 Type Preprint Author Bukowski-Thall G Pages 2023.11.16.566698 Link Publication -
2023
Title Residual Humidity in Paraffin-Embedded Tissue Reduces Nucleic Acid Stability DOI 10.3390/ijms24098010 Type Journal Article Author Abuja P Journal International Journal of Molecular Sciences Pages 8010 Link Publication -
2023
Title Associations between Endothelial Lipase and Apolipoprotein B-Containing Lipoproteins Differ in Healthy Volunteers and Metabolic Syndrome Patients DOI 10.3390/ijms241310681 Type Journal Article Author Klobucar I Journal International Journal of Molecular Sciences Pages 10681 Link Publication -
2021
Title Metabolic profiling links cardiovascular risk and vascular end organ damage DOI 10.1016/j.atherosclerosis.2021.07.005 Type Journal Article Author Streese L Journal Atherosclerosis Pages 45-53 Link Publication -
2021
Title Multiple regulatory intrinsically disordered motifs control FOXO4 transcription factor binding and function DOI 10.1016/j.celrep.2021.109446 Type Journal Article Author Bourgeois B Journal Cell Reports Pages 109446 Link Publication -
2021
Title p53 Transactivation Domain Mediates Binding and Phase Separation With poly-PR/GR DOI 10.20944/preprints202109.0265.v1 Type Preprint Author Usluer S Link Publication -
2021
Title Branched-Chain Amino Acids Can Predict Mortality in ICU Sepsis Patients DOI 10.3390/nu13093106 Type Journal Article Author Reisinger A Journal Nutrients Pages 3106 Link Publication -
2021
Title Wide-Range, Rapid, and Specific Identification of Pathogenic Bacteria by Surface-Enhanced Raman Spectroscopy DOI 10.1021/acssensors.1c00641 Type Journal Article Author Liu S Journal ACS Sensors Pages 2911-2919 Link Publication -
2021
Title Fasting reverses drug-resistance in hepatocellular carcinoma through p53-dependent metabolic synergism DOI 10.1101/2021.02.10.430545 Type Preprint Author Krstic J Pages 2021.02.10.430545 Link Publication -
2021
Title Lysophosphatidic Acid Induces Aerobic Glycolysis, Lipogenesis, and Increased Amino Acid Uptake in BV-2 Microglia DOI 10.3390/ijms22041968 Type Journal Article Author Joshi L Journal International Journal of Molecular Sciences Pages 1968 Link Publication -
2021
Title Metabolic, Phenotypic, and Neuropathological Characterization of the Tg4-42 Mouse Model for Alzheimer’s Disease DOI 10.3233/jad-201204 Type Journal Article Author Hinteregger B Journal Journal of Alzheimer's Disease Pages 1151-1168 Link Publication -
2021
Title Global Analysis of Protein Arginine Methylation DOI 10.2139/ssrn.3762765 Type Preprint Author Zhang F Link Publication -
2021
Title Tissue-Specific Landscape of Metabolic Dysregulation during Ageing DOI 10.3390/biom11020235 Type Journal Article Author Zhang F Journal Biomolecules Pages 235 Link Publication -
2021
Title Global analysis of protein arginine methylation DOI 10.1101/2021.01.25.428036 Type Preprint Author Zhang F Pages 2021.01.25.428036 Link Publication -
2018
Title Saxagliptin but Not Sitagliptin Inhibits CaMKII and PKC via DPP9 Inhibition in Cardiomyocytes DOI 10.3389/fphys.2018.01622 Type Journal Article Author Koyani C Journal Frontiers in Physiology Pages 1622 Link Publication -
2018
Title The neuronal S100B protein is a calcium-tuned suppressor of amyloid-ß aggregation DOI 10.1126/sciadv.aaq1702 Type Journal Article Author Cristóvão J Journal Science Advances Link Publication -
2018
Title Regulation of cellular senescence via the FOXO4-p53 axis DOI 10.1002/1873-3468.13057 Type Journal Article Author Bourgeois B Journal FEBS Letters Pages 2083-2097 Link Publication -
2018
Title Acetate-free, citrate-acidified bicarbonate dialysis improves serum calcification propensity—a preliminary study DOI 10.1093/ndt/gfy134 Type Journal Article Author Lorenz G Journal Nephrology Dialysis Transplantation Pages 2043-2051 -
2018
Title A switch point in the molecular chaperone Hsp90 responding to client interaction DOI 10.1038/s41467-018-03946-x Type Journal Article Author Rutz D Journal Nature Communications Pages 1472 Link Publication -
2018
Title Phase Separation of FUS Is Suppressed by Its Nuclear Import Receptor and Arginine Methylation DOI 10.1016/j.cell.2018.03.004 Type Journal Article Author Hofweber M Journal Cell Link Publication -
2018
Title Chapter 10 Small Paramagnetic Co-solute Molecules DOI 10.1039/9781788013291-00283 Type Book Chapter Author Madl T Publisher Royal Society of Chemistry (RSC) Pages 283-309 -
2018
Title Cytosolic Aspartate Availability Determines Cell Survival When Glutamine Is Limiting DOI 10.1016/j.cmet.2018.07.021 Type Journal Article Author Alkan H Journal Cell Metabolism Link Publication -
2022
Title Alternative nutritional and clinical care practices for NEC prevention drive distinct profiles and functional responses in the preterm gut microbiome DOI 10.1101/2022.06.08.22276177 Type Preprint Author Neumann C Pages 2022.06.08.22276177 Link Publication -
2022
Title Acinar-to-ductal metaplasia in the pancreas requires a glycolytic switch and functional mitochondria DOI 10.1101/2022.06.27.495427 Type Preprint Author Neuß T Pages 2022.06.27.495427 Link Publication -
2022
Title Brain regions show different metabolic and protein arginine methylation phenotypes in frontotemporal dementias and Alzheimer’s disease DOI 10.1016/j.pneurobio.2022.102400 Type Journal Article Author Zhang F Journal Progress in Neurobiology Pages 102400 Link Publication -
2022
Title Residual Humidity in Paraffin Embedded Tissue Reduces Nucleic Acid Stability DOI 10.20944/preprints202212.0457.v1 Type Preprint Author Abuja P Link Publication -
2022
Title Efficacy and Safety of Intermittent Fasting in People With Insulin-Treated Type 2 Diabetes (INTERFAST-2)—A Randomized Controlled Trial DOI 10.2337/dc22-1622 Type Journal Article Author Obermayer A Journal Diabetes Care Pages 463-468 Link Publication -
2022
Title Brain Regions Show Different Metabolic and Protein Arginine Methylation Phenotypes in Frontotemporal Dementias and Alzheimer's Disease DOI 10.2139/ssrn.4195324 Type Journal Article Author Rakhimbekova A Journal SSRN Electronic Journal -
2022
Title Hepatic p53 is regulated by transcription factor FOXO1 and acutely controls glycogen homeostasis DOI 10.17169/refubium-38763 Type Other Author Galhuber M Link Publication -
2022
Title Reduced olfactory performance is associated with changed microbial diversity, oralization and accumulation of dead biomaterial in the nasal olfactory area DOI 10.21203/rs.3.rs-2251236/v1 Type Preprint Author Kumpitsch C Link Publication -
2022
Title Targeting epigenetic features in clear cell sarcomas based on patient-derived cell lines DOI 10.21203/rs.3.rs-2190208/v1 Type Preprint Author Karner C Link Publication -
2019
Title Glycogen Synthase Kinase 3 Beta Controls Presenilin-1-Mediated Endoplasmic Reticulum Ca2+ Leak Directed to Mitochondria in Pancreatic Islets and beta-Cells DOI 10.33594/000000005 Type Journal Article Author Klec C Journal Cellular Physiology & Biochemistry Pages 57-75 Link Publication -
2019
Title pH-Lemon, a Fluorescent Protein-Based pH Reporter for Acidic Compartments DOI 10.1021/acssensors.8b01599 Type Journal Article Author Burgstaller S Journal ACS Sensors Pages 883-891 Link Publication -
2019
Title The Co-chaperone Cns1 and the Recruiter Protein Hgh1 Link Hsp90 to Translation Elongation via Chaperoning Elongation Factor 2 DOI 10.1016/j.molcel.2019.02.011 Type Journal Article Author Schopf F Journal Molecular Cell Link Publication -
2019
Title Cysteine oxidation triggers amyloid fibril formation of the tumor suppressor p16INK4A DOI 10.1101/509109 Type Preprint Author Göbl C Pages 509109 Link Publication -
2019
Title A single alcohol binge impacts on neutrophil function without changes in gut barrier function and gut microbiome composition in healthy volunteers DOI 10.1371/journal.pone.0211703 Type Journal Article Author Stadlbauer V Journal PLOS ONE Link Publication -
2019
Title Presenilin-1 Established ER-Ca2+ Leak: a Follow Up on Its Importance for the Initial Insulin Secretion in Pancreatic Islets and ß-Cells Upon Elevated Glucose DOI 10.33594/000000158 Type Journal Article Author Klec C Journal Cellular Physiology & Biochemistry Pages 573-586 Link Publication -
2019
Title A small molecule chaperone rescues the stability and activity of a cancer-associated variant of NAD(P)H:quinone oxidoreductase 1 in vitro DOI 10.1002/1873-3468.13636 Type Journal Article Author Strandback E Journal FEBS Letters Pages 424-438 Link Publication -
2019
Title Cysteine oxidation triggers amyloid fibril formation of the tumor suppressor p16INK4A DOI 10.1016/j.redox.2019.101316 Type Journal Article Author Göbl C Journal Redox Biology Pages 101316 Link Publication -
2019
Title Structure of an RNA aptamer in complex with the fluorophore tetramethylrhodamine DOI 10.1093/nar/gkz1113 Type Journal Article Author Duchardt-Ferner E Journal Nucleic Acids Research Pages 949-961 Link Publication -
2020
Title Tin-Doped Near-Infrared Persistent Luminescence Nanoparticles with Considerable Improvement of Biological Window Activation for Deep Tumor Photodynamic Therapy DOI 10.1021/acsabm.0c00644 Type Journal Article Author Shi J Journal ACS Applied Bio Materials Pages 5995-6004 Link Publication -
2020
Title N-acetylaspartate improves cell survival when glucose is limiting DOI 10.1101/2020.05.28.114629 Type Preprint Author Alkan H Pages 2020.05.28.114629 Link Publication -
2020
Title Human Milk Oligosaccharides Modulate the Risk for Preterm Birth in a Microbiome-Dependent and -Independent Manner DOI 10.1128/msystems.00334-20 Type Journal Article Author Pausan M Journal mSystems Link Publication -
2020
Title Transgene integration causes RARB downregulation in homozygous Tg4–42 mice DOI 10.1038/s41598-020-63512-8 Type Journal Article Author Hinteregger B Journal Scientific Reports Pages 6377 Link Publication -
2020
Title Nonclassical nuclear localization signals mediate nuclear import of CIRBP DOI 10.1073/pnas.1918944117 Type Journal Article Author Bourgeois B Journal Proceedings of the National Academy of Sciences Pages 8503-8514 Link Publication -
2020
Title Probing Surfaces in Dynamic Protein Interactions DOI 10.1016/j.jmb.2020.02.032 Type Journal Article Author Spreitzer E Journal Journal of Molecular Biology Pages 2949-2972 Link Publication -
2019
Title NMR characterization of solvent accessibility and transient structure in intrinsically disordered proteins DOI 10.1007/s10858-019-00248-2 Type Journal Article Author Hartlmüller C Journal Journal of Biomolecular NMR Pages 305-317 Link Publication -
2019
Title Purification and Application of Genetically Encoded Potassium Ion Indicators for Quantification of Potassium Ion Concentrations within Biological Samples DOI 10.1002/cpch.71 Type Journal Article Author Bischof H Journal Current Protocols in Chemical Biology Link Publication -
2022
Title EGCG Promotes FUS Condensate Formation in a Methylation-Dependent Manner DOI 10.3390/cells11040592 Type Journal Article Author Lenard A Journal Cells Pages 592 Link Publication -
2022
Title Oral Intake of L-Ornithine-L-Aspartate Is Associated with Distinct Microbiome and Metabolome Changes in Cirrhosis DOI 10.3390/nu14040748 Type Journal Article Author Horvath A Journal Nutrients Pages 748 Link Publication -
2022
Title Fasting improves therapeutic response in hepatocellular carcinoma through p53-dependent metabolic synergism DOI 10.1126/sciadv.abh2635 Type Journal Article Author Krstic J Journal Science Advances Link Publication -
2022
Title Hepatic p53 is regulated by transcription factor FOXO1 and acutely controls glycogen homeostasis DOI 10.1016/j.jbc.2022.102287 Type Journal Article Author Oster M Journal Journal of Biological Chemistry Pages 102287 Link Publication -
2022
Title HDL-apoA-II Is Strongly Associated with 1-Year Mortality in Acute Heart Failure Patients DOI 10.3390/biomedicines10071668 Type Journal Article Author Klobucar I Journal Biomedicines Pages 1668 Link Publication -
2022
Title Phosphatidylethanolamine N-methyltransferase Knockout Modulates Metabolic Changes in Aging Mice DOI 10.20944/preprints202208.0159.v1 Type Preprint Author Zhou Q Link Publication -
2022
Title The PROVIT Study—Effects of Multispecies Probiotic Add-on Treatment on Metabolomics in Major Depressive Disorder—A Randomized, Placebo-Controlled Trial DOI 10.3390/metabo12080770 Type Journal Article Author Kreuzer K Journal Metabolites Pages 770 Link Publication -
2022
Title Lipoprotein Subclasses Independently Contribute to Subclinical Variance of Microvascular and Macrovascular Health DOI 10.3390/molecules27154760 Type Journal Article Author Streese L Journal Molecules Pages 4760 Link Publication -
2022
Title FOXO transcription factors differ in their dynamics and intra/intermolecular interactions DOI 10.1016/j.crstbi.2022.04.001 Type Journal Article Author Spreitzer E Journal Current Research in Structural Biology Pages 118-133 Link Publication -
2022
Title p53 Regulates a miRNA-Fructose Transporter Axis in Brown Adipose Tissue Under Fasting DOI 10.3389/fgene.2022.913030 Type Journal Article Author Reinisch I Journal Frontiers in Genetics Pages 913030 Link Publication -
2017
Title Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging DOI 10.1016/j.cell.2017.02.031 Type Journal Article Author Baar M Journal Cell Link Publication -
2017
Title Catalytic competence, structure and stability of the cancer-associated R139W variant of the human NAD(P)H:quinone oxidoreductase 1 (NQO1) DOI 10.1111/febs.14051 Type Journal Article Author Lienhart W Journal The FEBS Journal Pages 1233-1245 Link Publication -
2017
Title Long-range allosteric signaling in red light–regulated diguanylyl cyclases DOI 10.1126/sciadv.1602498 Type Journal Article Author Gourinchas G Journal Science Advances Link Publication -
2017
Title The redox environment triggers conformational changes and aggregation of hIAPP in Type II Diabetes DOI 10.1038/srep44041 Type Journal Article Author Rodriguez Camargo D Journal Scientific Reports Pages 44041 Link Publication -
2017
Title RNA structure refinement using NMR solvent accessibility data DOI 10.1038/s41598-017-05821-z Type Journal Article Author Hartlmüller C Journal Scientific Reports Pages 5393 Link Publication -
2017
Title Characterization of Protein–Protein Interfaces in Large Complexes by Solid-State NMR Solvent Paramagnetic Relaxation Enhancements DOI 10.1021/jacs.7b03875 Type Journal Article Author O¨Ster C Journal Journal of the American Chemical Society Pages 12165-12174 Link Publication -
2017
Title Integrative metabolomics as emerging tool to study autophagy regulation DOI 10.15698/mic2017.08.584 Type Journal Article Author Stryeck S Journal Microbial Cell Pages 240 Link Publication -
2017
Title Patchy proteins form a perfect lens DOI 10.1126/science.aao1456 Type Journal Article Author Madl T Journal Science Pages 546-547 Link Publication
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2020
Title Training course in biobanking Type Influenced training of practitioners or researchers
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2018
Link
Title Dataset for: Regulation of cellular senescence via the FOXO4-p53 axis DOI 10.6084/m9.figshare.6176126 Type Database/Collection of data Public Access Link Link -
2018
Link
Title Dataset for: Regulation of cellular senescence via the FOXO4-p53 axis DOI 10.6084/m9.figshare.6176126.v1 Type Database/Collection of data Public Access Link Link -
2017
Link
Title Solution structure of oxidized and amidated human IAPP (1-37), the diabetes II peptide. DOI 10.13018/bmr34069 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 8 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680151 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 7 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680148 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 9 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680154 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 6 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680142 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 5 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680139 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 3 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680133 Type Database/Collection of data Public Access Link Link -
2021
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Title Additional file 10 of Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans DOI 10.6084/m9.figshare.16680124 Type Database/Collection of data Public Access Link Link
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2019
Title Editorial board member Scientific Reports Type Appointed as the editor/advisor to a journal or book series Level of Recognition Continental/International
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2017
Title HRSM - Programmausschreibung 2016/ Teilbereich Forschung/EEK Type Capital/infrastructure (including equipment) Start of Funding 2017 Funder Government of Germany -
2019
Title F&E Infrastrukturförderung - Next-generation X-ray platform for integrative structural biology Type Capital/infrastructure (including equipment) Start of Funding 2019 Funder Austrian Research Promotion Agency -
2018
Title FFG BRIDGE - Structural characterization of biopharmaceuticals using SAXS Type Research grant (including intramural programme) Start of Funding 2018 Funder Austrian Research Promotion Agency